Sequence details NCBI ID: XM_004870531.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ptpn13
Gene Name protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase), transcript variant X10
Entrez Gene ID 101715582

Database interlinks

Part of NW_004624872.1 (Scaffold)

For more information consult the page for NW_004624872.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTP ENSCPOG00000007122 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006420, Guinea pig)

Protein Percentage 84.38%
CDS Percentage 87.34%
Ka/Ks Ratio 0.29069 (Ka = 0.0876, Ks = 0.3013)

PTPN13 ENSG00000163629 (Human)

Gene Details

protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)

External Links

Gene Match (Ensembl Protein ID: ENSP00000394794, Human)

Protein Percentage 86.14%
CDS Percentage 88.03%
Ka/Ks Ratio 0.22164 (Ka = 0.0739, Ks = 0.3334)

Ptpn13 ENSMUSG00000034573 (Mouse)

Gene Details

protein tyrosine phosphatase, non-receptor type 13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000048119, Mouse)

Protein Percentage 79.81%
CDS Percentage 80.79%
Ka/Ks Ratio 0.19357 (Ka = 0.1217, Ks = 0.6285)

Ptpn13 ENSRNOG00000002061 (Rat)

Gene Details

protein tyrosine phosphatase, non-receptor type 13 (Ptpn13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000057876, Rat)

Protein Percentage 78.12%
CDS Percentage 79.41%
Ka/Ks Ratio 0.1971 (Ka = 0.1349, Ks = 0.6843)

Genome Location

Sequence Coding sequence

Length: 7467 bp    Location: 3183357..3405882   Strand: +
Raw sequence   
>XM_004870531.1
ATGCATGTGTCACTAGCTGAGGCCCTGGAGGTTCGGGGTGGACCACTGCAGGAGGAAGAAATATGGGCTGTATTAAACCAGAGTGCCGAAAGTCTCCAAGAATTATTCAGAAAAGTGAGCATAGCAGATCCTGCTGCCCTTGGCTTCATCATTTCTCCATGGTCCCTGCTGTTGCTGCCATCTGGTAGTGTGTCATTTACAGATGAAAATATTTCCAATCAGGATCTTCGGGCGTTCACTGCACCAGAAGTTCTTCAAAATCAGTCACTAACTTCACTGTCAGATGTTGAAAAGATCCATATTTATTCTCTTGGAATGACATTATATTGGGGGGCTGATCATGAAGTACCTCAGAGCCAACCCATTAAGCTTGGAGATCATCTCAACAGTATATTGCTTGGAATGTGTGAGGACACTACTTATGCTCGGGTTTCTGTTCGGACTGTCCTGGATGCTTGCAGTGCCCACATCAGGAACAGCAATTGTGCACCTTCATTTTCCTATGTGAAGCAGTTGGTAAAACTGGTTCTGGGAAATCTTTCTGGGACGGATCAGCTTTCCCGTAACAGTGAACAAAAGCCTGATCGAAGCCAGGCTATTCGAGACCGATTGAGAGGAAAAGGATTACCAACAGGAAGAAGCCCTACTTCTGATGTACTAGACATACACAAGGCTCCATTCTCTCATCAAACCTTTCTTAACAAAGGGCTTAGTAAATCTATGGGATTTTTGTCCATCAGAGACACTCAAGATGAGGAAGATTATTTCAAGAACATTTCATCAGAGAATAATTCTGGACATGAAGATTTTGAAAATACCAGCACTCCTTACCAGCTCAAAGGCGATGGCCCACAAAAAAAGGTTGTCCCTGTCATTGATGTGCTTCCCAAAAAGAAGATTTGGGCTTCATCTGTGGACTTGCTGTCTTCTCCTGATAGAGATTTCTCTTCTGGAGAGATCAACAGATACCAGCGCTGTCACCCTGATGGCGTCACAGGGCGGACTCCAACTACTCCTAGGAAAAAAGAGGCCAGATACTCTGATGGAAGCATAGCCTTGGATATCTTTGGCCCTCAAAGAATGGATCCAGTATGTTATACGCGAGAATTGCCCACTCCCTCAGCAATATCAAGTGCTCTGGACAGAATTCGAGAGAGACAGAAGAAACTTCAGGTTTTGAGAGAAGCCATGAATGTAGAAGAACCAGTACGAAGATACAAAACTTACCACAGTGATATCTTTAGTACATCCAGTGAAAGTCCATCTATTATGTCCTTGGAATCAGATTTCAGACAAGTGAGAAGGAGTGATGCTTCAAAGAGGTTCGAATCCGGCAGCGGTCTCCCAGGACTGGATGAAACTTCAGGTCAAGGCCAGCCACAGAGACCAAGCAGACGATATGAAACACCCCTGGAAGGCAACACAGTCAACCAGGAGATCATGCTGAAACGGCAGGAAGAAGAGATGATGCAGCTGCAAGCCAGGATGGCTCTTCGACAGTCTCGGCTCAGCCTGTGTCCTGGAGACACAGTCAAAGCTTCCATGCTGGACATCACCAGGGATTCGCTAAGAGAAATGGCCCTAGAGACAGCCATGACCCAGAGGAAACTGAGGAATTTCTTTGGCCCTGAGTTTGTGAAAATGACAGTTGAACCATTTGTATCTTTGGATTTGCCACGGTCTATCCTTACCAAGAAAGGGAAGAATGAGGATAATCGGAGAAAAGTAAACATAATACTTTTGAGCGGACAGAGATTGGAACTGACCTGTAATACCAAAACCATATGTAAAGATGTGTTTGATATGGTTGTGGCCCACATTGGCTTAGTGGAGCATCATTTGTTTGCTTTAGCAACTCTCAAAGATAATGAGTATTTTTTTGTTGATCCTGATTTAAAATTAACCAAAGTGGCCCCAGAAGGATGGAAAGAAGAACCAAAGAAAAAGAGCAAAGCTGCTGTTAATTTTACCTTGTTTTTTCGAATTAAATTTTTCATGGAGGATATTAGTCTAATACAACATACTCTGACCTGTCATCAGTATTACCTTCAGCTGCGGAAAGATATTTTGGAGGAGAGGATACACTGTGATGATGAAACTTCCTTATTGCTGGCATCCTTGGCACTCCAGGCTGAGTATGGAGATTATCAGCTAGAGGTTCATGGTGTATCTTACTTTAGAATGGAACATTATTTGCCTGCTAGAGTGATGGAGAAACTTGATTTATCCTATATTAAAGAAGAGTTACCAAAATTGCATAATACCTATGTGGGAGCTTCTGAAAAAGAGACAGAGGTAGAATTTTTAAAGGTCTGCCAAAGACTGACAGAATATGGAGTTCATTTTCACCGGGTACACCCTGAGAAGAAGTCACAAACAGGAATACTGCTTGGAGTCTGTTCTAAAGGTGTTCTGGTGTTTGAAGTTCACAATGGAGTTCGCACATTGGTTCTTCGCTTTCCATGGAGGGAAACCAAGAAGATTTCTTTTTCTAAAAAGAAAATTACACTGCAGAATACATCAGATGAAATAAAACATGCCTTCCAGACAGACAACAGCAAAGTCTGCCAGTACCTGCTGCACCTCTGCTCTTCCCAGCATAAGTTCCAGCTGCAGATGAGAGCAAGACAGAGCAACCAAGATGCCCAAGACATTGAGAGAGCTTCGTTTAGGAGCCTGAACCTCCAAGCAGAGTCCGTTAGAGGATTTAATATGGGACGCGCAATCAGCACTGGCAGTCTGGCCAGCAGCACCCTCAACAAACTTGCCGTGCGACCTTTGTCAGTTCAAGCTGAGATTCTGAAGAGGCTCTCCTGCTCAGAGCTGTCGCTTTACCAGCCATTGCAAAACAGTTCAAAAGAGAAGAGTGACAAGGCCTGCTGGGAGGAGAAGCCTAGCGGGATGAGTAAATCATACCATGATCTCAGTCAGGGCCCCCCCCTCTCTCCTCATCGGAAAAATGTCATTGTTAACATGGAATCCCCACCACACACCATTGTGGAGTTGGTGGGAAAACCTTTCCACCAGATGACAAGATCTGATACAGGATCTTGGGCAGGACCCACAAAACTCAATAATTCAAAGTCTGTTGCAAGTTTAAATAGAAGTCCTGAAAGGAGGAAACACGAATCAGACTCATCCATTGAAGACCCTGGTCAAGCATATGGTATAGGAATGACTATGCATAATTCTGGAAATTCTTCATCCCAAGTACCCTTAAAAGAAAATGATGTGCTACACAAAAGATGGAGCATCGTGTCTTCACCAGAAAGGGAGATCACATTGGTGAACCTGAAAAAAGATTCAAAGTATGGCTTAGGATTTGAAATTATTGGTGGAGAGAAGATGGGAAGACTGGATCTAGGTGTATTTATCAGTTCCATTACCCCTGGAGGACCAGCTGACTTAGATGGATGCTTAAAGCCAGGAGACCGTTTGATATCTGTGAATAGTGTGAGTTTGGAGGGGGTCAGCCACCATGCTGCAACTGAAATTTTGCAAAATGCACCTGAAGATGTGACACTTGTTATCTCTCAGCCAAAAGAAAAAATATCCAAAGTGCCTTCTACTCCTGTGCATTTTCCCAATGGGATGAAAAACTACACGAAGAAGACTTTCTACACACGAGAAAACACAGTGGATTCTTTGGAGGACCCCCCCTGGCAACGGGGTGCCCTGAGGCACCTCACAGAGGGCTCCTGTATGCTGCCTAGGGGCCTGTGGGAAGGAAGCCTCAGTTCTCAGGACTCCAGGACAGAGAGTGCCAGCTTGTCCCCAAGCCAGGTTAATGGTTTCTTTGGCAGCCATTTAGGTGACGGAGCCTGGCAGGAATCACAGCATGGCAGCCCTTGCCCATCTGTAGTATCCAAAGCTACTGAGAAAAAGAGAACTTCCTCCAACAGTAACCAAAGCAAGTCCAGAAAGCCAGCCATTCCTGATGCACCAGATGACTCTGAACGCGGAGACTCAGACATGGATGAAGCCACTTACTCCAGCAGTCAAGACCATCAGACACCAAAAAAGGAATCTTCTTCCTCAGTGAATACATCCAACAAAATGAATTTTAAAACTTTTTCTTCATCACCTCCTAAACCTGGACATATCTTTGAGGTTGAACTGGCTAAAAATGAGAACAGCTTGGGGATAAGTGTCACGGGAGGTGTGAATACCAGTGTCAAACATGGTGGAATTTATGTGAAAGCAGTTATTCCCAAGGGAGCAGCAGAGTCTGATGGTAGAATTCACAAAGGTGATCGTGTGCTAGCTGTCAATGGAGTAAGCCTGGAAGGAGCTACCCATAAGCAAGCTGTGGAAATACTGAGAAATACAGGACAGGTGGTTCATCTACTGTTAGAAAAGGGACAACCAGCAGCATCCAAAGAACATGTCCCTGTTACCCCACAGTGCACCCTTCCAGATCAGAATGCACAAGGTCAAAGTCCAGAAAAAATGGTGAAGAAAGCAACTCATGTCAAAGACTATAGCTTTGTTACTGAAGAAAATACATTTGAGGTAAAACTGTTTAAAAATAGCTCAGGCCTAGGATTCAGTTTTTCTCGAGAAGATAATCTTATACCACAGCAAATGAACACCAGCATAGTAAGGGTTAAAAAGCTCTTCCCTGGACAGCCAGCAGCAGAGAGTGGAAAAATAGATGTGGGAGATGTTATTTTGAAAGTGAATGGAGCCTCTTTGAAAGGACTGTCACAGCAGGAAGTCATATCTGCTCTCAGGGGAACAGCTCCAGAAGTGTGCTTGCTTCTCTGTAGACCTCCACCCGGTGTACTGCCAGAAATTGATACTGCTCTTCTGACCCCACTCCACTCTCCAGCTCAAGTGCTTCCAAGCAGCACTAGAGATCTTTCTCAGCCATCGTGGGTGGAGCAAAGCACCAGCTCAGATAGAAATGAAGTGTCTGACAAAATCAAGAAGCCGTGCAAGTCCCCCTCCAGGAAAGATAGCTATAGCGACAGCAGTGGGAGTGGAGAAGATGACTTGATAAAAGATCCAGCAAAGATATCAAATATAACTTGGAGTTCAGCTTTGCACCAGACTCTAAACAACATGGTAGCCCAAATACATACTCAACACACAGCACCCACGAGTCAAGAAAATGCCATGTACACCATGTTTTACTATCCTCAGAAAATACCCAGTAAACCACAATTTGAGGACAGTAACCCTCCTTCTCCTCTACCACTGGATGTGACTCCTGGGCAGAACTGCCAGCCCCACTTAGAATCTGCTTCCTCTAATTCAGTGGGTAAATATATACATCACACTTCCGAACCAGCTAGACAAGAAAACTTGATAACTTTGAAAAATGACCTGGAAAACCAAGTGGAAGACTTTGAGCTGGAAGTAGAACTGCCCATTACTCTAATTAAATCAGAAAAAGGGAGCCTGGGTTTTACAGTAACCAAAGGCAACCAGAGCATCGGTTGTTATGTTCACGATGTCATACAGGATCCAGCCAAAAGTGATGGACGGCTAAAGCCTGGAGACCGGCTCGTAAAGGTTAATGATACAGATGTTACAAGCATGACTCACACTGATGCAGTGAATCTGCTCCGGGCTGCACCTAAAACAGTTAGATTAGTTCTTGGACGAATTCTAGAATTACCCAAGATGCCATTGTTGTCTCATTTGCTGCCTGACATTTCATTAACATGCAACAAAGAGGAGTTGGGTTTTTCCTTATCTGGAGGGCATGACAGTCTTCATCAAGTGGTATATATTAGTGATATCAATCCAAGGTCAGTTGCAGCTGTCGAGGGTAATCTCCAACTTTTAGATATCATACATTATGTGAATGGCATCAGCACACAAGGAATGACCTTGGAAGAAGCTAACAAGGCATTAGACACATCGCTTCCCTCAGTAGTGCTGAAAGCAACAAGAGATGGTCAACCAGTGTTTCCTAGTTCAAAGAAGTCTGCCATTTCAACCCTAGAGTCAACCAAAGCCAATGGCCATCACAGTATGGAGCTCTGTGGCCAACCCACCCTCGCTCCCAGGGACTCGTTCTCCAAGGTTAATGGGGAAGAAATCATTGAAATTTTGTATCCTGAAGGAAAATGTTCTACTTCTCAGATGAAGGGATCAGCAAATTTGACTGGGCCTGAAGAATCTGATATACAAGATGGCGAGATTTATGATGATCCTCAAGAAGCTGAAGTTATCCAGTCTCTGCTAGATGTTGTGGATGAGGAAGCCCAGAATCTTTCAAATGAAAATAATGCAACAGGAGATGCTTGTGTTCCAGGTACATTGAAAACAAATGGGAGGTTATCAAAAGAGAGAGCAGAAGACACAGACTGTGATGGCTCACCTTTACCTGAGGACTTTGCTGAGTCTCCTGAAATGAATGATTGTAAAGAATACTGTGAAGAAAAACTAAACAGTGAAAGCTCACTGCAAAAGTCACAAGAAGGGAAGATGAAAGAGGACGAGGGAACCTGGGGAACTGGTGATTTGTCAGTGGGAACCATAGACCATGAAGACTCCAAGAAAGGTCATCTCTTCCTGACCAGTGAGGAGCTGGTGGCACTTCCTGTCATCAGAGTGCTGCCCTCGGGGAGATACACCGGTGCCAGTTTGAAATCTGTCATTCAGATGCTGCAGGGCTTACTGGATCAGGGAATCCCTTCTAAGGAGCTGGAGAATCTTCAAGAATTAAAACCTTTGGATCAGTGCATAATTGGACAGACTAAGGAAAACAGAAGGAAGAACAGATACAAAAACATACTTCCCTATGACGCTACCAGGGTGCCTCTGGGAGATGATGGGGGCTACATCAACGCCAGCTTCATCAAGATTCCAGTGGGCAAGGAGGAGTTTGTTTACATTGCTTGCCAGGGGCCTCTCCCCACAACTGTTGGAGATTTCTGGCAGATGATTTGGGAACAAAAATCCACAGTGATAGCCATGATGACACAAGAAGTAGAAGGAGAAAAAATCAAATGCCAGCGCTACTGGCCTAACCTCCTAGGCAAAACGACAATGGCCAATGACAGGCTGCGCCTGGCTCTGGAGAAGATGCAGCACCTGAAGGGCTTTGTGGTGCGGGCACTGACGTTGGAAGACATTCGGACAGGAGAGGTTCGACATATCTTCCACCTGAATTTCACTGCCTGGCCTGACCATGACACACCTTCTCAGCCAGACGCCCTGCTCACCTTCATCTCCTACATGAGGCACGTCCACAAGTCGGGCCCTGTCACCACACACTGCAGCGCTGGCATTGGGCGCTCAGGGACCCTGATATGCATAGATGTGGTCCTCGGACTGATCAGTCAGGATCTAGAATTCGACATCTCCGACCTGGTGCGCTGCATGCGGCTACAGAGGTATGGGATGGTGCAGACTGAGGATCAGTACATCTTCTGCTATCAGGTCATCCTCTATGTCCTCACACGTCTTCAGGCTGAAGAAGAGCAAAGAGAGCAACCCCAGCTTCCGGAATGA

Related Sequences

XP_004870588.1 Protein

Ptpn13 PREDICTED: tyrosine-protein phosphatase non-receptor type 13 isoform X10 [Heterocephalus glaber]

Length: 2488 aa      View alignments
>XP_004870588.1
MHVSLAEALEVRGGPLQEEEIWAVLNQSAESLQELFRKVSIADPAALGFIISPWSLLLLPSGSVSFTDENISNQDLRAFTAPEVLQNQSLTSLSDVEKIHIYSLGMTLYWGADHEVPQSQPIKLGDHLNSILLGMCEDTTYARVSVRTVLDACSAHIRNSNCAPSFSYVKQLVKLVLGNLSGTDQLSRNSEQKPDRSQAIRDRLRGKGLPTGRSPTSDVLDIHKAPFSHQTFLNKGLSKSMGFLSIRDTQDEEDYFKNISSENNSGHEDFENTSTPYQLKGDGPQKKVVPVIDVLPKKKIWASSVDLLSSPDRDFSSGEINRYQRCHPDGVTGRTPTTPRKKEARYSDGSIALDIFGPQRMDPVCYTRELPTPSAISSALDRIRERQKKLQVLREAMNVEEPVRRYKTYHSDIFSTSSESPSIMSLESDFRQVRRSDASKRFESGSGLPGLDETSGQGQPQRPSRRYETPLEGNTVNQEIMLKRQEEEMMQLQARMALRQSRLSLCPGDTVKASMLDITRDSLREMALETAMTQRKLRNFFGPEFVKMTVEPFVSLDLPRSILTKKGKNEDNRRKVNIILLSGQRLELTCNTKTICKDVFDMVVAHIGLVEHHLFALATLKDNEYFFVDPDLKLTKVAPEGWKEEPKKKSKAAVNFTLFFRIKFFMEDISLIQHTLTCHQYYLQLRKDILEERIHCDDETSLLLASLALQAEYGDYQLEVHGVSYFRMEHYLPARVMEKLDLSYIKEELPKLHNTYVGASEKETEVEFLKVCQRLTEYGVHFHRVHPEKKSQTGILLGVCSKGVLVFEVHNGVRTLVLRFPWRETKKISFSKKKITLQNTSDEIKHAFQTDNSKVCQYLLHLCSSQHKFQLQMRARQSNQDAQDIERASFRSLNLQAESVRGFNMGRAISTGSLASSTLNKLAVRPLSVQAEILKRLSCSELSLYQPLQNSSKEKSDKACWEEKPSGMSKSYHDLSQGPPLSPHRKNVIVNMESPPHTIVELVGKPFHQMTRSDTGSWAGPTKLNNSKSVASLNRSPERRKHESDSSIEDPGQAYGIGMTMHNSGNSSSQVPLKENDVLHKRWSIVSSPEREITLVNLKKDSKYGLGFEIIGGEKMGRLDLGVFISSITPGGPADLDGCLKPGDRLISVNSVSLEGVSHHAATEILQNAPEDVTLVISQPKEKISKVPSTPVHFPNGMKNYTKKTFYTRENTVDSLEDPPWQRGALRHLTEGSCMLPRGLWEGSLSSQDSRTESASLSPSQVNGFFGSHLGDGAWQESQHGSPCPSVVSKATEKKRTSSNSNQSKSRKPAIPDAPDDSERGDSDMDEATYSSSQDHQTPKKESSSSVNTSNKMNFKTFSSSPPKPGHIFEVELAKNENSLGISVTGGVNTSVKHGGIYVKAVIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVEILRNTGQVVHLLLEKGQPAASKEHVPVTPQCTLPDQNAQGQSPEKMVKKATHVKDYSFVTEENTFEVKLFKNSSGLGFSFSREDNLIPQQMNTSIVRVKKLFPGQPAAESGKIDVGDVILKVNGASLKGLSQQEVISALRGTAPEVCLLLCRPPPGVLPEIDTALLTPLHSPAQVLPSSTRDLSQPSWVEQSTSSDRNEVSDKIKKPCKSPSRKDSYSDSSGSGEDDLIKDPAKISNITWSSALHQTLNNMVAQIHTQHTAPTSQENAMYTMFYYPQKIPSKPQFEDSNPPSPLPLDVTPGQNCQPHLESASSNSVGKYIHHTSEPARQENLITLKNDLENQVEDFELEVELPITLIKSEKGSLGFTVTKGNQSIGCYVHDVIQDPAKSDGRLKPGDRLVKVNDTDVTSMTHTDAVNLLRAAPKTVRLVLGRILELPKMPLLSHLLPDISLTCNKEELGFSLSGGHDSLHQVVYISDINPRSVAAVEGNLQLLDIIHYVNGISTQGMTLEEANKALDTSLPSVVLKATRDGQPVFPSSKKSAISTLESTKANGHHSMELCGQPTLAPRDSFSKVNGEEIIEILYPEGKCSTSQMKGSANLTGPEESDIQDGEIYDDPQEAEVIQSLLDVVDEEAQNLSNENNATGDACVPGTLKTNGRLSKERAEDTDCDGSPLPEDFAESPEMNDCKEYCEEKLNSESSLQKSQEGKMKEDEGTWGTGDLSVGTIDHEDSKKGHLFLTSEELVALPVIRVLPSGRYTGASLKSVIQMLQGLLDQGIPSKELENLQELKPLDQCIIGQTKENRRKNRYKNILPYDATRVPLGDDGGYINASFIKIPVGKEEFVYIACQGPLPTTVGDFWQMIWEQKSTVIAMMTQEVEGEKIKCQRYWPNLLGKTTMANDRLRLALEKMQHLKGFVVRALTLEDIRTGEVRHIFHLNFTAWPDHDTPSQPDALLTFISYMRHVHKSGPVTTHCSAGIGRSGTLICIDVVLGLISQDLEFDISDLVRCMRLQRYGMVQTEDQYIFCYQVILYVLTRLQAEEEQREQPQLPE