Details from NCBI annotation

Gene Symbol Lsm3
Gene Name LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae), transcript variant X2
Entrez Gene ID 101708310

Database interlinks

Part of NW_004624872.1 (Scaffold)

For more information consult the page for NW_004624872.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LSM3 ENSCPOG00000006671 (Guinea pig)

Gene Details

LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006010, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 96.41%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1264)

LSM3 ENSG00000170860 (Human)

Gene Details

LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000302160, Human)

Protein Percentage 100.0%
CDS Percentage 94.12%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.2474)

Lsm3 ENSMUSG00000034192 (Mouse)

Gene Details

LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044178, Mouse)

Protein Percentage 100.0%
CDS Percentage 89.87%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.5302)

Lsm3 ENSRNOG00000008733 (Rat)

Gene Details

LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011557, Rat)

Protein Percentage 100.0%
CDS Percentage 90.85%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.4733)

Genome Location

Sequence Coding sequence

Length: 309 bp    Location: 1438576..1428885   Strand: -
>XM_004870502.1
ATGGCGGACGACGTGGACCAGCAACAAACCACCAACACTGTAGAGGAGCCACTGGATCTCATCAGACTCAGCCTGGATGAGCGAATCTATGTGAAAATGAGAAATGACCGAGAGCTTCGAGGCAGATTACATGCTTATGATCAGCATTTAAATATGATACTGGGAGATGTGGAAGAAACTGTGACTACTATAGAAATTGATGAAGAGACATATGAAGAGATATACAAATCAACAAAACGGAATATCCCGATGCTCTTTGTCCGGGGAGATGGTGTTGTGCTGGTTGCCCCTCCACTAAGAGTTGGCTGA

Related Sequences

XP_004870559.1 Protein

Lsm3 PREDICTED: U6 snRNA-associated Sm-like protein LSm3 isoform X2 [Heterocephalus glaber]

Length: 102 aa      View alignments
>XP_004870559.1
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG