Sequence details NCBI ID: XM_004870467.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Zfyve20
Gene Name zinc finger, FYVE domain containing 20, transcript variant X2
Entrez Gene ID 101698864

Database interlinks

Part of NW_004624872.1 (Scaffold)

For more information consult the page for NW_004624872.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ZFYVE20 ENSCPOG00000003200 (Guinea pig)

Gene Details

zinc finger, FYVE domain containing 20

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002899, Guinea pig)

Protein Percentage 87.35%
CDS Percentage 86.68%
Ka/Ks Ratio 0.13498 (Ka = 0.0703, Ks = 0.5209)

ZFYVE20 ENSG00000131381 (Human)

Gene Details

zinc finger, FYVE domain containing 20

External Links

Gene Match (Ensembl Protein ID: ENSP00000253699, Human)

Protein Percentage 80.64%
CDS Percentage 81.13%
Ka/Ks Ratio 0.13113 (Ka = 0.1133, Ks = 0.8639)

Zfyve20 ENSMUSG00000014550 (Mouse)

Gene Details

zinc finger, FYVE domain containing 20

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000014694, Mouse)

Protein Percentage 79.12%
CDS Percentage 79.21%
Ka/Ks Ratio 0.13137 (Ka = 0.1264, Ks = 0.9622)

Zfyve20 ENSRNOG00000011391 (Rat)

Gene Details

zinc finger, FYVE domain containing 20 (Zfyve20), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015602, Rat)

Protein Percentage 79.52%
CDS Percentage 78.58%
Ka/Ks Ratio 0.12776 (Ka = 0.1298, Ks = 1.016)

Genome Location

Sequence Coding sequence

Length: 2286 bp    Location: 915403..939580   Strand: +
Raw sequence   
>XM_004870467.1
ATGGCTTCGCTGGATGACCCAGGGGATGTGAGAGAGGGCTTCCTCTGCCCCCTGTGCTTGAAGGACCTGCAGTCTTTCTACCAGCTGCAGTCACATTATGAGGAGGAGCACTCGGGGGAAGACCGTGATGTCAAAGGGCAGATTAAAAGTCTTTTCCAGAAGGCTAAGAAAGCAAAGAACAAGTTGCTGAGACGGGAAGGGGATGAGCAAGCAGAGCCAGGGGCTCCAGGATATGAATCCTTCAGCAATGGAGGGGTTGACCCTTACATGTGGGAGCCCCAGGAGCTTGGGACCATGAGAAGTCATCTTTCTGAATTCAAAAAACACCGTGCTGCCAGAATTGACCACTATGTTGTTGAAGTCAATAAATTAATAATCAGGTTAGAGAAGCTCACTGCATTTGACAGAACTAACACTGAGTCTGCAAAGATCCGAGCGATTGAAAAGTCTGTGGTGCCTTGGGTCAATGACCAGGACGTCCCTTTCTGTCCTGACTGCGGGAGCAAGTTCAGCATCCGTAACCGCCGCCACCACTGCCGCCTCTGTGGCTCGATCATGTGCAAGAAGTGCATGGAGCTCATCAGCCTGCTCTTGGCAAACAAGCTCACCAGCGCCAGCAGGGATGCCCTGAGCACCCACACCAGCCCCAACCAGTCTCCTGGCAGTGTGCATGGCTCACGCCGTGGCAGCATCGGCAGTGTGAGCAGCATGAGCTCTGTGCTGGATGAGAAGGAGAATGAGCGCATCCGCTGCTGCAGGCACTGCAAGGACACGCTGTTACGCAGGGAGCAGCAGATGGACGAGCGGGAGCACACACCTGCCATCACCAGGCTCTACGAGAAATTGCGGCTCTGCATGGCGAAGGTGGACCAGAAAGCCCCTGAGTACACGCGGATGGCAGCGTCCTTAAATGCCGGGGAGACCACCTACAGCCTGGAGCAGGCCAGCGACCTCCGCCTGGAGGTGCAGAAAATGTACGAGCTCATAGACGCCCTGAGTAAGAAGATCTTAACCTTGGGCTTGAACCAGGACCCCCCACCACATCCCACCACACTGCGGCTGCAGAGGATGATCCGGTACTCAGCCACGCTCTTCGTGCAGGAAAAGTTGCTGGGTTTGATGTCACTGCCAACCAAGGAACAGTTTGAAGAACTGAAAAAGAAAAGGAAGCAGGACATGGAGAGGAAGAGGATGCTGGAGAGACAGGCTGCCCCGGAGTCACAATGTAGGCTCGAGGACAAGCAGCGTGGCCCAGCGGCCAACGGGGAAGTGGCCCCCACAAGAAAGGCCGAGGGCTGGCTCCCACTGCCTGAGACACAGGGCCAGCGCGAGGACCCCGACCCACTGCTCCAGCAGATCCACAACATTGAGTCGTTTATCAAGCAGGCCCAGGCTGCCAGCCGCACTGATGAGGTGCGCACCCTAGGGGAGAACCTGCGGCAGCTGCAGGACGAGTACGACCGGCAGCAGACAGCCAAGGCCATTGAGCTGTCTCGCAGGCAGGCTGAGGAGGAGGCCCTGCAGTGTGAGCAGTTGCAGAGGCTTCGGGAGCGGGAGTGGGAGCGGGAGCGAGAGCGGGAGCGGAAGCAGGCGGCCTCCCTACACTCGAGGACCCAGGCCCTGGACTCCCGGGAGGCTGCACCCTTCCTGCTGGAGCCCAGCCGGGGACCTCGCCCACACCCTGCCTTCGCTCTGGAGCTGGGCTCTTCCTCAGGCTCTGGGATGGCCCCTGAGACGCCCTCACCCTGTGCAGTGTGGGCCCTGAGCCAGGAGAGCCTCCACCAGAGCACTGAGCCCCAGCAGAACGACTGTGCCCTGAACTCCTTTAGCAGGGACTTCTTCTCCAGCCCTGCTGTTGTGCAGGCCAAGCTCCCCAGAGAGTACAACCCTTTCGAGGAGGAGGAAGAGGAGGAAGAGGAGGCAGTGGCTGCAGGGAACCCCTTCACCAGCCCTGACAGCCCAGCACCCAACCCCTTCGACAGCCCAGCGCCCAACCCCTTTGAGGATGGCAACGATGTACCCAACCGGAGTCCTGCCAGCCCTCCTGTACCCGGCAACCCCTTCGAGGAGCCCACCGGCACCAACCCCTTTGAGGTGGACAGCGACAGCTGCCCGGAGGCCGAGGAGCCCATCGAAGAGGACCTGCTCCTGCAGCAGATAAACAATATCAAGGCCTACATCTTTGACGCCAAGCAGTACGGCCGGCTGGATGAGGTGGAGGTGCTGACTGAGAACCTGCGGGAGCTGAGGTGCACATTGGCCAAGCAGAAGGGCCCCCCTGAGTGA

Related Sequences

XP_004870524.1 Protein

Zfyve20 PREDICTED: rabenosyn-5 isoform X2 [Heterocephalus glaber]

Length: 761 aa      View alignments
>XP_004870524.1
MASLDDPGDVREGFLCPLCLKDLQSFYQLQSHYEEEHSGEDRDVKGQIKSLFQKAKKAKNKLLRREGDEQAEPGAPGYESFSNGGVDPYMWEPQELGTMRSHLSEFKKHRAARIDHYVVEVNKLIIRLEKLTAFDRTNTESAKIRAIEKSVVPWVNDQDVPFCPDCGSKFSIRNRRHHCRLCGSIMCKKCMELISLLLANKLTSASRDALSTHTSPNQSPGSVHGSRRGSIGSVSSMSSVLDEKENERIRCCRHCKDTLLRREQQMDEREHTPAITRLYEKLRLCMAKVDQKAPEYTRMAASLNAGETTYSLEQASDLRLEVQKMYELIDALSKKILTLGLNQDPPPHPTTLRLQRMIRYSATLFVQEKLLGLMSLPTKEQFEELKKKRKQDMERKRMLERQAAPESQCRLEDKQRGPAANGEVAPTRKAEGWLPLPETQGQREDPDPLLQQIHNIESFIKQAQAASRTDEVRTLGENLRQLQDEYDRQQTAKAIELSRRQAEEEALQCEQLQRLREREWERERERERKQAASLHSRTQALDSREAAPFLLEPSRGPRPHPAFALELGSSSGSGMAPETPSPCAVWALSQESLHQSTEPQQNDCALNSFSRDFFSSPAVVQAKLPREYNPFEEEEEEEEEAVAAGNPFTSPDSPAPNPFDSPAPNPFEDGNDVPNRSPASPPVPGNPFEEPTGTNPFEVDSDSCPEAEEPIEEDLLLQQINNIKAYIFDAKQYGRLDEVEVLTENLRELRCTLAKQKGPPE