Details from NCBI annotation

Gene Symbol Tmcc1
Gene Name transmembrane and coiled-coil domain family 1, transcript variant X1
Entrez Gene ID 101697366

Database interlinks

Part of NW_004624872.1 (Scaffold)

For more information consult the page for NW_004624872.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMCC1 ENSCPOG00000009299 (Guinea pig)

Gene Details

transmembrane and coiled-coil domain family 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008348, Guinea pig)

Protein Percentage 94.4%
CDS Percentage 90.94%
Ka/Ks Ratio 0.10205 (Ka = 0.0362, Ks = 0.3549)

TMCC1 ENSG00000172765 (Human)

Gene Details

transmembrane and coiled-coil domain family 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000376930, Human)

Protein Percentage 93.15%
CDS Percentage 86.72%
Ka/Ks Ratio 0.06435 (Ka = 0.0414, Ks = 0.6434)

Tmcc1 ENSMUSG00000030126 (Mouse)

Gene Details

transmembrane and coiled coil domains 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000086285, Mouse)

Protein Percentage 93.57%
CDS Percentage 86.51%
Ka/Ks Ratio 0.05435 (Ka = 0.0385, Ks = 0.7081)

Tmcc1 ENSRNOG00000011614 (Rat)

Gene Details

Protein LOC100912698

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039858, Rat)

Protein Percentage 93.15%
CDS Percentage 86.38%
Ka/Ks Ratio 0.04996 (Ka = 0.0369, Ks = 0.7381)

Genome Location

Sequence Coding sequence

Length: 1449 bp    Location: 628356..588941   Strand: -
>XM_004870462.1
ATGTTGGTGTGGTGCGGCTGCACCTGCCTTTTCTGGGAAAGGCCCCTCTCGGAGACTGTGAAGCTCGAGCGGTTGGAAGTAAGCAGCCTCGCCCAAGCTTCCAGTGCAGTGGCCTCCAGCGCTGATGGCAGCATCCATACCGAGCCTGCGGATGGCATCCCTGACCCTCAGCGCACAAAGGCAGCCATCGCCCACCTGCAGCAGAAGATCCTGAAGCTCACAGAGCAGATCAAGATTGCACAGACAGCCCGGGATGACAATGTTGCTGAGTACTTGAAGCTCGCCAACAGTGCCGACAAGCAGCAGGCTGCACGAATCAAGCAGGTCTTCGAGAAGAAGAACCAGAAGTCTGCCCAGACCATCCTCCAGCTGCAGAAGAAGCTTGAACACTACCACCGGAAGCTCCGAGAGGTGGAACAGAATGGGATCCCCCGGCAGCCAAAGGATGTCTTCAGGGACATGCACCAGGGCCTGAAGGACGTGGGAGCCAAGGTGACTGGCTTCAGCGAAGGTGTGGTGGACAGTGTCAAAGGTGGCTTCTCCAGCTTCTCCCAGGCCACCCACTCGGCAGCAGGGGCCGTGGTCTCCAAGCCCAGGGAGATTGCCTCGCTGATTCGGAATAAATTTGGCAGTGCAGACAACATCCCTAACCTGAAGGACTCTCTGGAGGAAGGCCAAGTGGAGGATGGGGCCAAGGTTTTGGGAGTGATTTCAAACTTTCAGTCCAGTCCAAAATATGGTAGTGAGGAAGACTGCTCTAGTGCCACATCAGGCTCTGTGGGGGCCAACAGTACCACGGGGGGCATAGCTGTGGGGGCATCTAGCTCCAAGACCAACACCCTCGACATGCAGAGCTCGGGGTTTGACGCACTGCTCCATGAGATCCAGGAGATCCGTGAGACCCAGGCCAGACTGGAGGAGTCCTTCGAGACCCTCAAGGAGCACTACCAGAGGGACTACTCCTTAATAATGCAGACCCTGCAGGAGGAGCGCTACAGATGTGAACGATTAGAAGAACAACTAAATGACCTAACAGAACTCCACCAGAATGAAATCTTGAACTTGAAGCAGGAGTTAGCCAGCATGGAAGAGAAAATTGCCTATCAGTCCTATGAACGGGCCCGAGATATCCAGGAGGCCTTGGAGGCATGCCAGACCCGCATCTCTAAGATGGAGCTGCAGCAGCAGCAGCAGCAGGTGGTGCAGCTGGAGGGGCTGGAGAGCGCCACCGCACGCAACCTGCTGGGCAAGCTCATCAACATCCTCCTGGCCGTCATGGCAGTGCTCCTAGTCTTTGTGTCCACAGTAGCAAACTGCGTGGTCCCGCTCATGAAGACACGCAACAGGACGTTCAGCACTTTATTCCTCGTGGTTTTTGTTGCCTTTCTCTGGAAGCACTGGGACGCCCTCTTCAGCTACATGGAGCGGTTCTTCTCGCCCCCTAGATGA

Related Sequences

XP_004870519.1 Protein

Tmcc1 PREDICTED: transmembrane and coiled-coil domains protein 1 isoform X1 [Heterocephalus glaber]

Length: 482 aa      View alignments
>XP_004870519.1
MLVWCGCTCLFWERPLSETVKLERLEVSSLAQASSAVASSADGSIHTEPADGIPDPQRTKAAIAHLQQKILKLTEQIKIAQTARDDNVAEYLKLANSADKQQAARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREVEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGFSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIPNLKDSLEEGQVEDGAKVLGVISNFQSSPKYGSEEDCSSATSGSVGANSTTGGIAVGASSSKTNTLDMQSSGFDALLHEIQEIRETQARLEESFETLKEHYQRDYSLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLESATARNLLGKLINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLFLVVFVAFLWKHWDALFSYMERFFSPPR