Details from NCBI annotation

Gene Symbol Rho
Gene Name rhodopsin
Entrez Gene ID 101696995

Database interlinks

Part of NW_004624872.1 (Scaffold)

For more information consult the page for NW_004624872.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RHO ENSCPOG00000004984 (Guinea pig)

Gene Details

Cavia porcellus rhodopsin (Rho), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004486, Guinea pig)

Protein Percentage 92.24%
CDS Percentage 90.8%
Ka/Ks Ratio 0.05776 (Ka = 0.0379, Ks = 0.6553)

RHO ENSG00000163914 (Human)

Gene Details

rhodopsin

External Links

Gene Match (Ensembl Protein ID: ENSP00000296271, Human)

Protein Percentage 93.39%
CDS Percentage 89.56%
Ka/Ks Ratio 0.02672 (Ka = 0.0296, Ks = 1.107)

Rho ENSMUSG00000030324 (Mouse)

Gene Details

rhodopsin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032471, Mouse)

Protein Percentage 91.67%
CDS Percentage 86.88%
Ka/Ks Ratio 0.02582 (Ka = 0.0394, Ks = 1.5256)

Rho ENSRNOG00000011144 (Rat)

Gene Details

rhodopsin (Rho), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061473, Rat)

Protein Percentage 92.24%
CDS Percentage 88.79%
Ka/Ks Ratio 0.03384 (Ka = 0.0348, Ks = 1.0292)

Genome Location

Sequence Coding sequence

Length: 1047 bp    Location: 523912..527615   Strand: +
>XM_004870461.1
ATGAACGGCACGGAGGGCCCCAACTTCTACGTGCCCTTCTCCAACATCACGGGCATGGTGCGCAGCCCCTTCGAGTACCCACAGTACTACCTGGCTGAGCCCTGGCAGTTCTCTATGCTGGCCGCCTACATGTTCCTGCTCATCGTGCTGGGCTTCCCTGTCAACTTCCTCACACTCTACGTCACCGTGCAGCATAAGAAGCTTCGCACGCCTCTCAACTACATCCTGCTCAACCTGGCCGTGGCCGACCTCTTCATGGTCATTTGTGGCTTCACCACCACCCTCTACACCTCCATGCACGGATACTTCGTCTTCGGGGCCACGGGCTGCAACATGGAGGGCTTCTTTGCCACTCTGGGTGGTGAGATCGCCCTGTGGTCCCTGGTGGTGCTGGCCATCGAGCGCTACATGGTCGTCTGCAAGCCCATGAGCAACTTCCGCTTTGGCGAGAACCATGCCATCGTGGGCGTTGCCTTCACCTGGGTCATGGCGCTGGCTTGTGCCGCACCGCCCCTCGCTGGCTGGTCCAGGTATATCCCTGAGGGGATGCAGTGCTCATGTGGGATCGACTACTACACGCCCAAGCCTGAGATCAACAATGAGTCCTTCGTCATCTACATGTTCGTGGTCCACTTCACCATCCCCCTGGTCATCATCTTCTTCTGTTACGGGCAGCTGGTCTTCACCGTCAAGGAGGCAGCTGCACAGCAGCAGGAGTCGGCCACCACCCAGAAGGCAGAGAAGGAGGTCACCCGCATGGTCATCATCATGGTCATCGCCTTCCTGATCTGCTGGGTCCCCTATGCCAGTGTGGCTATGTACATCTTCACCCACCAGGGCTCTGACTTTGGCCCCATCTTCATGACCATCCCGGCGTTCTTTGCCAAGAGCTCCTCTATCTACAACCCCGTCATCTACATCATGATGAACAAGCAGTTCCGGAACTGCATGCTCACTACCATCTGCTGTGGCAAGAGCCCACTGGGCGATGACGAGGCCTCCACCACTGCCTCCAAGACCGAAACCAGCCAGGTGGCCCCGGCCTAA

Related Sequences

XP_004870518.1 Protein

Rho PREDICTED: rhodopsin [Heterocephalus glaber]

Length: 348 aa      View alignments
>XP_004870518.1
MNGTEGPNFYVPFSNITGMVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPVNFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVICGFTTTLYTSMHGYFVFGATGCNMEGFFATLGGEIALWSLVVLAIERYMVVCKPMSNFRFGENHAIVGVAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTPKPEINNESFVIYMFVVHFTIPLVIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAMYIFTHQGSDFGPIFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTICCGKSPLGDDEASTTASKTETSQVAPA