Details from NCBI annotation

Gene Symbol Mbd4
Gene Name methyl-CpG binding domain protein 4, transcript variant X1
Entrez Gene ID 101724783

Database interlinks

Part of NW_004624872.1 (Scaffold)

For more information consult the page for NW_004624872.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MBD4 ENSCPOG00000004970 (Guinea pig)

Gene Details

methyl-CpG binding domain protein 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004474, Guinea pig)

Protein Percentage 78.66%
CDS Percentage 84.77%
Ka/Ks Ratio 0.44253 (Ka = 0.1354, Ks = 0.306)

MBD4 ENSG00000129071 (Human)

Gene Details

methyl-CpG binding domain protein 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000249910, Human)

Protein Percentage 73.72%
CDS Percentage 81.19%
Ka/Ks Ratio 0.37056 (Ka = 0.1666, Ks = 0.4495)

Mbd4 ENSMUSG00000030322 (Mouse)

Gene Details

methyl-CpG binding domain protein 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032469, Mouse)

Protein Percentage 66.61%
CDS Percentage 75.15%
Ka/Ks Ratio 0.36481 (Ka = 0.2343, Ks = 0.6423)

Mbd4 ENSRNOG00000010919 (Rat)

Gene Details

Protein Mbd4

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014537, Rat)

Protein Percentage 65.58%
CDS Percentage 74.94%
Ka/Ks Ratio 0.42717 (Ka = 0.2487, Ks = 0.5822)

Genome Location

Sequence Coding sequence

Length: 1704 bp    Location: 462625..453560   Strand: -
>XM_004870451.1
ATGACGAATCCGAGCCCGGGGGACGGCGGAGAAGTCTCCGAGCGCCGAGACCCAGAGCCTCTGCGTGACCTCCGTGAGGAAGATGGTGCTACAGGTTTGGAAAAAGTGGGAAAAGATGAAAAACAAATGGTGATAAACAGAAGCAGGGAGTGTAATGCCCTGCTACAGAAACCTATTGCTTCTACTCAGTTTGTTGGTGCTGCAGTGACAGAATGTCATAAACCTGTCCTCTGTGGATGGGAAAGAATTGTGAAGCAAAGGTTATCTGGGAAAACAGCAGGAAGATTTTATGTGTACTTTATCAGCCCACAGGGACTGAAGTTCAGATCCAAGAGTTCACTTGCTAATTATCTTCACAAAAATGGAGACACAGCTCTAGAGCCAGAAGATTTTGACTTTTCTGTACTTTCTAAAAGGAACATCAAGTCAAGATGTAAGGGCTCTAGTGTGGCAGCTCTGACAGCCCAACAGCAAAATGAAAGTAACGTTTCAAACCGGAACCTTCGGACTCGAAGGTGGCAGAAAATGGATGTTTCTCCTCTGCCAAGTAATACTTCAGAGTTGCAAGATGACAGAGGACTATCCAACCTTGATTCCATCAGAATGCTTTTGAAAGAAGAAGAGAATGTTAATGATGTTAGCTCTGGGAAGATTAGGAAGTTCAAAGGAAACGTGACTATTTTGGAAGGAATTCAAATTAAGAAAACCAGAAAACAGTGCAGGAACAGTCTTTCAGATTCTCTCCAAAGTAATACAAAAAAAGAATCTGTGTTTGATAAAGCAGAGGCTGAAAGTATGTCTGTTACACAAGGAAATCAGCTTAATAGAGCTTTCTGCATTTCTGATGCCATAGCAGCCAATGGTACCTTCAGTGTGACTGAGAAGGAAAAGAGCCTCATAAAAGAAAAATCACCAAGCTCAGGATCAGATTTTCATTTTGAACAAATAACATCTGGTACCACAAACAAATCATGTCCAACCACAGAAGCAGAACATGAGAAGTATGAGGAAAGCTTTTTAGAATCAGAGGAAATGAGAACAAAAGTAGAAGATAGAGAAAGAAAGGAACATTTGCATACTGACATTTTACAGTATGGCTCTGAAGTGGACAACAGCTGCTCACAAAACAGGAAAGACTTTACTTCTGAGAAAATATGTCCAGAAGACAGCATCCCACGAATACACACAGAAAAGCGGAAGACAAGCCAGTACTTCTCCAGCAAGTATAACAGAGAAGCTCTTAGCCCTCCTCGACGCAAAGCCTTTAAAAAGTGGACCCCACCTCGGTCGCCTTTTAATCTCGTCCAGGAGACACTGTTCCATGACCCGTGGAAGCTCCTCATCGCAACGATATTTCTCAATCGGACCTCAGGTAAGATGGCAATCCCCGTGCTCTGGGAGTTCCTGGAGAAGTACCCCTCGGCCGAGGCAGCGAGAGCTGCAAACTGGAGGGATGTGTCGGAGCTGCTTAAACCTCTCGGCCTCTATGAGCTCCGAGCCAAAACCATTGTCAAGTTTTCAGATGAGTACCTGACGAAGCAGTGGAAATATCCAATTGAGCTTCATGGGATCGGCAAATACGGCAATGACTCTTACCGGATTTTTTGCGTCAATGAGTGGAAGCAGGTGCACCCAGAAGACCACAAGCTGAACAAGTACCACGACTGGCTTTGGGAAAACCATGAAAAGCTGAGTCTGTCCTGA

Related Sequences

XP_004870508.1 Protein

Mbd4 PREDICTED: methyl-CpG-binding domain protein 4 isoform X1 [Heterocephalus glaber]

Length: 567 aa      View alignments
>XP_004870508.1
MTNPSPGDGGEVSERRDPEPLRDLREEDGATGLEKVGKDEKQMVINRSRECNALLQKPIASTQFVGAAVTECHKPVLCGWERIVKQRLSGKTAGRFYVYFISPQGLKFRSKSSLANYLHKNGDTALEPEDFDFSVLSKRNIKSRCKGSSVAALTAQQQNESNVSNRNLRTRRWQKMDVSPLPSNTSELQDDRGLSNLDSIRMLLKEEENVNDVSSGKIRKFKGNVTILEGIQIKKTRKQCRNSLSDSLQSNTKKESVFDKAEAESMSVTQGNQLNRAFCISDAIAANGTFSVTEKEKSLIKEKSPSSGSDFHFEQITSGTTNKSCPTTEAEHEKYEESFLESEEMRTKVEDRERKEHLHTDILQYGSEVDNSCSQNRKDFTSEKICPEDSIPRIHTEKRKTSQYFSSKYNREALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEAARAANWRDVSELLKPLGLYELRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS