Details from NCBI annotation

Gene Symbol Efcab12
Gene Name EF-hand calcium binding domain 12
Entrez Gene ID 101724435

Database interlinks

Part of NW_004624872.1 (Scaffold)

For more information consult the page for NW_004624872.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EFCAB12 ENSCPOG00000004338 (Guinea pig)

Gene Details

EF-hand calcium binding domain 12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003912, Guinea pig)

Protein Percentage 73.48%
CDS Percentage 80.68%
Ka/Ks Ratio 0.22458 (Ka = 0.1572, Ks = 0.7)

EFCAB12 ENSG00000172771 (Human)

Gene Details

EF-hand calcium binding domain 12

External Links

Gene Match (Ensembl Protein ID: ENSP00000420854, Human)

Protein Percentage 55.6%
CDS Percentage 70.22%
Ka/Ks Ratio 0.24081 (Ka = 0.3058, Ks = 1.2697)

Efcab12 ENSRNOG00000026176 (Rat)

Gene Details

Protein LOC680899

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000047958, Rat)

Protein Percentage 50.54%
CDS Percentage 63.0%
Ka/Ks Ratio 0.14757 (Ka = 0.3897, Ks = 2.6405)

Genome Location

Sequence Coding sequence

Length: 1680 bp    Location: 451972..437056   Strand: -
>XM_004870450.1
ATGGTCGAGTCCTACGACGTCTATGACTGCCTGAGCTCGGCGCTGCTCGGGTTTGGCCAGCCTGAGACTCTGGAGGGCAATGACAGCACCAGTGTGGTCCCTGCCTTTGATCCTGAGCCAGTCATTGCCCACTGCTTCAAGCAGTTCAAGCAGGAGGACTTCCACCTGCTGAAGAGCCACCAGCGGGTCATCATCGTGCCTACCCAGCAGGGACAGGCGCCCATGGATCGTGAGCCCCAGCCCCCACCACCTGCCCCCAACCTCAGAGTCCTGGGTTCTGGGGACATCCCCGGGCTGAGGGAGAACAGGGCAGCCTGGCTGCACCACAGGGTGAAGCTGCGGAAGGAGCTGGAGGCCCTGGGTGACGTGACTCGGTGGCTGGAGAACAAGCCCAGCATCACCCCCTTGGAGGCCAAGGTCCTGAACATGCTCCATGAGGAGCGAAAGGCCCAGCTTACGGTCGAGGTGACCACCACCACAGTCGCCAAGGTGAGCAGGGCACTGGGCAGGTGCCCCCGACGAGTGGTGCCCCAGCTTTGGCTGCCCAAGCCACCAGCCTTGTCGGCCCTGTACACCTACCTGCGCCACCGCAAAATTCAGGTGCTGGAGCTGTTTGCCAAGGGCCTGGGCACACAGCGGAGAGTCCCCCGGGAGGAATTCCTCACCACACTGAGGACGGTTGGGGTACCCCTGAAGCAGCAGGAGATGGAGGATGTGGTGATCTACCTGAGCTCCCTCGAGAACCACCATGACATCACTATGGAGGCCCTGGCCAGCACCTACAAGCAGTGGTCTCTGGCCCAGCTGAGGAGCACGGTACCCACCGTGCACAAGTGCTCTGTCCCGGCCCAGGGCATGTCATCCCCACATCCCTGTAGGAAGGACCTGCTCATGGTGCCCGAGTTCCCTGTGCCCATGGAGGCTCGGCCCCTGACGCTGGAGGAGATGGAGGATGTGGGCAGGCACTACCGTGAGCGCAAGCGGCAGCTCAAGCTCCCCATCCCCTCTATCGAGTACACGGAGAGCTGCCGCCTGGTGCACAGTGGGGACGAGCGCGTGGACCAGCACTGCCTGCCATCCACGGTGGCTGGTGAGGGCCAGGAGCTTCTGGACACAGCCCGCATGGACGGCTTCCTGCTCTACTTGCGCTGTGGGCAGCAGTGTGCGGCCTCGGGCCTGCCAGTGACCAAGGAGGTCCTCACCCGAGCACTGCTGTACCCGGGGGACAGGATAGTCTTCCAGGACACCCAAGTGCGCCCCATCCGGCAGCCCGGCGGCTTCTACTCTGACTCGAGGGCCCTGGCCCCGCATCTGGCCACACACAGGACCAAGGGACCGAGGCTGGGTCCCCAGAAGAGCAACAAGAAGACACCCAAGGATGGCAGGAAGATGCCCTTTAAAGAAGCTCAGGAGGGTACCAGGAAGCTGAAGGCAAGGAGACTCAGGGGGCCCCAGCGCACCCACCCCAATGTCTTCTGGCCAGGCCACCTACTGGACAAGATGCGGCTGTGCCTGCCCACAGAGGCCACTGACCGGAGCCTGGCACTGTTCAGCTGCATCCAGCACAAGCGCCACGCCTACCAAGCCATCTACCACCCTGACCGCTGGTGGCCCCTGAGGGAGGAGAACTACATGAGCCGCACCTATTACAATTCCCCCAAGGTGTATGCCATCAACTAG

Related Sequences

XP_004870507.1 Protein

Efcab12 PREDICTED: EF-hand calcium-binding domain-containing protein 12 [Heterocephalus glaber]

Length: 559 aa     
>XP_004870507.1
MVESYDVYDCLSSALLGFGQPETLEGNDSTSVVPAFDPEPVIAHCFKQFKQEDFHLLKSHQRVIIVPTQQGQAPMDREPQPPPPAPNLRVLGSGDIPGLRENRAAWLHHRVKLRKELEALGDVTRWLENKPSITPLEAKVLNMLHEERKAQLTVEVTTTTVAKVSRALGRCPRRVVPQLWLPKPPALSALYTYLRHRKIQVLELFAKGLGTQRRVPREEFLTTLRTVGVPLKQQEMEDVVIYLSSLENHHDITMEALASTYKQWSLAQLRSTVPTVHKCSVPAQGMSSPHPCRKDLLMVPEFPVPMEARPLTLEEMEDVGRHYRERKRQLKLPIPSIEYTESCRLVHSGDERVDQHCLPSTVAGEGQELLDTARMDGFLLYLRCGQQCAASGLPVTKEVLTRALLYPGDRIVFQDTQVRPIRQPGGFYSDSRALAPHLATHRTKGPRLGPQKSNKKTPKDGRKMPFKEAQEGTRKLKARRLRGPQRTHPNVFWPGHLLDKMRLCLPTEATDRSLALFSCIQHKRHAYQAIYHPDRWWPLREENYMSRTYYNSPKVYAIN