Details from NCBI annotation

Gene Symbol Hnf1b
Gene Name HNF1 homeobox B, transcript variant X3
Entrez Gene ID 101711309

Database interlinks

Part of NW_004624871.1 (Scaffold)

For more information consult the page for NW_004624871.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HNF1B ENSCPOG00000001234 (Guinea pig)

Gene Details

HNF1 homeobox B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001116, Guinea pig)

Protein Percentage 98.74%
CDS Percentage 96.47%
Ka/Ks Ratio 0.0332 (Ka = 0.0054, Ks = 0.1638)

HNF1B ENSG00000108753 (Human)

Gene Details

HNF1 homeobox B

External Links

Gene Match (Ensembl Protein ID: ENSP00000225893, Human)

Protein Percentage 97.85%
CDS Percentage 94.55%
Ka/Ks Ratio 0.03419 (Ka = 0.0093, Ks = 0.272)

Hnf1b ENSMUSG00000020679 (Mouse)

Gene Details

HNF1 homeobox B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021016, Mouse)

Protein Percentage 95.87%
CDS Percentage 91.26%
Ka/Ks Ratio 0.0412 (Ka = 0.0185, Ks = 0.4481)

Hnf1b ENSRNOG00000002598 (Rat)

Gene Details

HNF1 homeobox B

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000046025, Rat)

Protein Percentage 86.69%
CDS Percentage 83.03%
Ka/Ks Ratio 0.11865 (Ka = 0.0927, Ks = 0.781)

Genome Location

Sequence Coding sequence

Length: 1674 bp    Location: 4713019..4662104   Strand: -
>XM_004870427.1
ATGGTGTCCAAGCTCACGTCGCTCCAGCAAGAACTCCTGAGCGCCCTGCTGAGCTCTGGGGTCACCAAGGAGGTGCTGGTCCAGGCCTTGGAAGACTTACTGCCATCCCCGAACTTCGGGGTGAAACTGGAGACTCTGCCCCTGTCCCCCGGGAGCGGGACCGATCCGGACACCAAGCCGGTCTTCCATACTCTCACCAACGGCCACGCTAAGGGCCGCTTGTCCGGGGACGAGGGCTCCGAGGACGGCGACGACTATGACACCCCTCCCATCCTCAAGGAGCTGCAGGCGCTCAACACCGAGGAGGCAGCTGAGCAGCGGGCGGAGGTGGACCGGATGCTCAGTGAGGATCCGTGGAGGGCTGCCAAAATGATCAAGGGCTACATGCAGCAACACAACATCCCCCAGAGGGAAGTGGTCGATGTCACAGGCCTGAATCAGTCACACCTTTCCCAGCATCTCAACAAGGGCACCCCTATGAAGACCCAGAAACGTGCTGCCCTGTACACCTGGTACGTCAGAAAGCAACGAGAGATCCTCCGACAGTTCAACCAGACAGTCCAGAGTTCTGGAAATATGACAGACAAAAGCAGTCAGGATCAGCTGCTGTTTCTCTTTCCAGAGTTCAGTCAACAGAGCCAGGGGCCTGGGCAGTCCGATGATGCCTGCTCTGAGCCCACCAACAAGAAGATGCGCCGCAACCGGTTCAAATGGGGGCCCGCATCCCAGCAAATCTTGTACCAGGCCTACGACCGGCAAAAGAACCCCAGCAAGGAAGAGAGGGAGGCCTTAGTGGAAGAGTGCAACAGGGCAGAATGTTTGCAACGAGGAGTTTCCCCCTCCAAAGCCCACGGGCTGGGATCCAACTTGGTCACTGAGGTCCGTGTCTACAATTGGTTTGCAAACCGGAGAAAGGAGGAGGCGTTCCGGCAGAAGCTGGCCATGGACGCCTATAGCTCCAATCAGACACACACCCTGAACCCCCTGCTTGCCCATGGCTCCCCCCACCACCAGCCCAGTGCCTCGCCTCCAAATAAGCTGTCAGGAGTACGCTACAGCCAGCAAGGAAACAATGAGGTCACTTCCTCCTCAACAATCAGTCACCATGGTAACAGCGCCATGGTAACCAGCCAGTCAGTTTTACAGCAAGTCTCCCCAGCCAGCCTGGACCCAGGCCACAATCTCCTCTCACCTGATGGTAAAATGATAGCAGTCTCAGGAGGAGGCCTGCCCCCGGTCAGCACCTTGACGAATATCCACAGCCTCTCCCACCATAATCCCCAGCAATCTCAGAACCTCATCATGACCCCACTGTCTGGAGTCATGGCCATTGCACAAAGCCTCAACACTTCCCAAGCACAGAGCGTCCCAGTCATCAACAGCGTGGCCGGCAGCCTGGCGGCCTTGCAGCCCGTCCAGTTCTCCCAGCAGCTGCACAGCCCTCATCAGCAGACCCTCATGCAGCAGAGCCCAGGCAGCCACATGGCCCAGCAGCCCTTCATGGCTGCTGTGACTCAGCTGCAGAACGCACACATGTACACACACAAGCAGGAACCCCCCCAGTATTCCCATACCTCCCGGTTTCCATCTGCGATGGTGGTCACAGATACCAGCAGCATCAGTACACTCACCAACATGTCTTCCAGTAAACAGTGCCCATTGCAAGCCTGGTGA

Related Sequences

XP_004870484.1 Protein

Hnf1b PREDICTED: hepatocyte nuclear factor 1-beta isoform X3 [Heterocephalus glaber]

Length: 557 aa      View alignments
>XP_004870484.1
MVSKLTSLQQELLSALLSSGVTKEVLVQALEDLLPSPNFGVKLETLPLSPGSGTDPDTKPVFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEEAAEQRAEVDRMLSEDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREILRQFNQTVQSSGNMTDKSSQDQLLFLFPEFSQQSQGPGQSDDACSEPTNKKMRRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSSNQTHTLNPLLAHGSPHHQPSASPPNKLSGVRYSQQGNNEVTSSSTISHHGNSAMVTSQSVLQQVSPASLDPGHNLLSPDGKMIAVSGGGLPPVSTLTNIHSLSHHNPQQSQNLIMTPLSGVMAIAQSLNTSQAQSVPVINSVAGSLAALQPVQFSQQLHSPHQQTLMQQSPGSHMAQQPFMAAVTQLQNAHMYTHKQEPPQYSHTSRFPSAMVVTDTSSISTLTNMSSSKQCPLQAW