Details from NCBI annotation

Gene Symbol Lhx1
Gene Name LIM homeobox 1
Entrez Gene ID 101704561

Database interlinks

Part of NW_004624871.1 (Scaffold)

For more information consult the page for NW_004624871.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LHX1 ENSCPOG00000027154 (Guinea pig)

Gene Details

LIM homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014380, Guinea pig)

Protein Percentage 99.26%
CDS Percentage 94.83%
Ka/Ks Ratio 0.00998 (Ka = 0.0031, Ks = 0.3093)

LHX1 ENSG00000132130 (Human)

Gene Details

LIM homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000254457, Human)

Protein Percentage 99.01%
CDS Percentage 93.35%
Ka/Ks Ratio 0.00813 (Ka = 0.004, Ks = 0.4954)

Lhx1 ENSMUSG00000018698 (Mouse)

Gene Details

LIM homeobox protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000018842, Mouse)

Protein Percentage 99.01%
CDS Percentage 88.59%
Ka/Ks Ratio 0.00517 (Ka = 0.0043, Ks = 0.8243)

Lhx1 ENSRNOG00000002812 (Rat)

Gene Details

LIM homeobox 1 (Lhx1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003799, Rat)

Protein Percentage 99.01%
CDS Percentage 88.67%
Ka/Ks Ratio 0.0052 (Ka = 0.0043, Ks = 0.8187)

Genome Location

Sequence Coding sequence

Length: 1221 bp    Location: 3954504..3961716   Strand: +
>XM_004870404.1
ATGGTGCACTGTGCTGGCTGCAAAAGGCCCATCCTGGACCGCTTCCTCTTGAATGTGCTGGACAGGGCCTGGCATGTCAAGTGTGTCCAGTGCTGTGAATGTAAATGCAACCTGACCGAGAAGTGCTTCTCCCGGGAAGGCAAGCTCTACTGTAAGAACGACTTCTTCCGATGTTTCGGTACGAAATGCGCGGGCTGCGCGCAGGGCATCTCCCCTAGCGACCTGGTGCGGAGGGCGCGAAGCAAAGTGTTTCACCTGAACTGCTTTACCTGCATGATGTGTAACAAGCAGCTTTCCACCGGCGAGGAGCTCTACATCATAGACGAGAACAAGTTCGTCTGCAAAGAGGATTACCTAAGTAACAGCAATGTCGCCAAAGAGAACAGCCTCCACTCGGCCACCACGGGCAGTGACCCCAGTTTGTCTCCGGATTCCCAAGACCCATCGCAGGACGATGCCAAGGACTCAGAGAGCGCAAATGTGTCTGACAAGGAAGGGGGCAGCAATGAGAATGATGACCAGAACTTGGGCGCCAAGCGGCGGGGGCCGCGCACCACCATTAAAGCCAAGCAGCTGGAGACACTGAAGGCCGCTTTCGCAGCTACACCCAAGCCCACACGACACATCCGTGAGCAGCTGGCGCAAGAGACCGGCCTCAACATGCGTGTCATCCAGGTCTGGTTCCAGAATCGGCGCTCCAAGGAACGGAGGATGAAGCAGCTGAGCGCGCTGGGTGCCCGGCGCCACGCTTTCTTCCGCAGTCCGCGCCGGATGCGGCCGCTGGTGGACCGCCTGGAGCCGGGCGAGCTCATCCCCAATGGCCCCTTCTCCTTCTACGGAGATTACCAGAGCGAGTACTACGGCCCGGGCGGCAACTATGACTTCTTCCCGCAAGGCCCTCCATCCTCGCAGGCCCAGACGCCCGTGGACCTTCCCTTCGTGCCGTCTACCGGGCCGTCCGGGACGCCCCTGGGCGGCCTGGAGCACCCGCTGCCAGGCCACCACCCGTCCAGCGAGGCGCAGCGATTCACCGACATCCTGGCGCACCCCCCAGGGGACTCACCCAGCCCCGAGCCCAGCCTGCCCGGGCCTCTGCACTCCATGTCGGCTGAGGTGTTCGGGCCGAGCCCGCCCTTCTCGTCGCTGTCGGTAAACGGCGGGGCGAGCTACGGGAACCACCTGTCCCATGCCCCCGAAATGAACGAGGCGGCCGTGTGGTAG

Related Sequences

XP_004870461.1 Protein

Lhx1 PREDICTED: LIM/homeobox protein Lhx1 [Heterocephalus glaber]

Length: 406 aa      View alignments
>XP_004870461.1
MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSNSNVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRPLVDRLEPGELIPNGPFSFYGDYQSEYYGPGGNYDFFPQGPPSSQAQTPVDLPFVPSTGPSGTPLGGLEHPLPGHHPSSEAQRFTDILAHPPGDSPSPEPSLPGPLHSMSAEVFGPSPPFSSLSVNGGASYGNHLSHAPEMNEAAVW