Details from NCBI annotation

Gene Symbol Tubd1
Gene Name tubulin, delta 1, transcript variant X3
Entrez Gene ID 101722316

Database interlinks

Part of NW_004624871.1 (Scaffold)

For more information consult the page for NW_004624871.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TUBD1 ENSCPOG00000004947 (Guinea pig)

Gene Details

tubulin, delta 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004453, Guinea pig)

Protein Percentage 91.15%
CDS Percentage 91.0%
Ka/Ks Ratio 0.16444 (Ka = 0.0449, Ks = 0.2733)

TUBD1 ENSG00000108423 (Human)

Gene Details

tubulin, delta 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000320797, Human)

Protein Percentage 87.39%
CDS Percentage 89.16%
Ka/Ks Ratio 0.20346 (Ka = 0.0643, Ks = 0.3162)

Tubd1 ENSMUSG00000020513 (Mouse)

Gene Details

tubulin, delta 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020821, Mouse)

Protein Percentage 84.07%
CDS Percentage 83.55%
Ka/Ks Ratio 0.13805 (Ka = 0.0855, Ks = 0.6194)

Tubd1 ENSRNOG00000003938 (Rat)

Gene Details

tubulin, delta 1 (Tubd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063872, Rat)

Protein Percentage 83.41%
CDS Percentage 82.23%
Ka/Ks Ratio 0.13133 (Ka = 0.0924, Ks = 0.7034)

Genome Location

Sequence Coding sequence

Length: 1359 bp    Location: 1666136..1643222   Strand: -
>XM_004870366.1
ATGTCAATAGTAACAGTGCAGCTTGGTCAGTGTGGCAACCAGATTGGCTTTGAAGTGTTCAACGCTTTGTTTACTGACTCACAGAGTTCCCAGGGATTGTGCTCTAAGAGAGAGAATGAAGCATATCAAGCGTCTTGCAAAGAAAGATTCTTCAGGGAGGAAAAAGGAGTTCCAATTGCCCGGGCCGTGCTTGTTGACATGGAACCTAAAGTTATCAATCACGTGCTGTCAAAGGCTGCCCAGTCTGGCCAGTGGAAGTACAGTCAGCATGCATGCTTCTGTCAGAAGCAGGGTTCTGGAAACAACTGGGCATATGGTTACTCTGTTCATGGACCCAAGCATGAAGACTCCATTATGAACCTAATCCAGAAGGAAGTGGAGAAATGTGACTCTTTGAATGGTTTTTTCATCATAATGAGTATAGCCGGGGGCACAGGATCAGGGCTGGGAGCCTTCCTTACACAGCATCTACACGATCACTATTCAAACGCTTTGAAAATGAATCAGATTATATGGCCCTATGGAACTGGTGAGGTTATTGTTCAGAACTACAACTCCATTTTGACACTCTCTCACTTGTACCGATCTTCAGATGCTCTCCTTATTCATGAGAATGATACAATCCATAAAATCTGTGCAAAACTGATGAATATTAAGCAAATCTCCTTTGGTGATATAAATCAAGTCCTGGCACATCAGCTGGGAAGTGTGTTCCAGCCTACTTATTCTGTGGAAGGCTCATTTCACTACAGAAGAAATCCACTAGGAGACTTAATGGAGAATTTAGTTCCACATCCTGAATTCAAGATGCTGGGTGTTCGTAACATTCCTCAGATGTCTGAGAATTCACTGCCATACAGCACATTTACTTGGGCTGGCCTCCTGAAGCATTTGAGACAGATGCTCATTTCTAATGCAAAAATGGAAGAAGGTATTGATTGGCAAGTGCGGCCTCCTTTACCAGGACTTCCACCTCTTGGCAAAATGTCTCAAAACAGGGAGCAGCATTTTAACACTTCCCTTGCTAACTTGGTCATCCTTCGTGGGAAAGATGTGCAGAATGCAAATCTGGAGGGTTTTAAGGACCCAGCCCTCTATACTTCCTGGTTAGGGCCTGACGAGGCCTTCACGGTGTGGAAAACCCAGCGAGCCTTTAGCAGATACGAGAAGTCCGCAGCGTTGGTCAGCAACAGCCAGTTCTTCGTGAAGCCGCTTGATACAATTGTGGGCAAAGCATGGAATATGTTCGCTTCAAAAGCCTATGTTCATCAGTACACAAAATTTGGAATTGAAGAAGAAGGCTTTTTGGACAGTTTCACACTGTTAGAACAGGTTGTTGCTAGTTACCGTAACCTCTGA

Related Sequences

XP_004870423.1 Protein

Tubd1 PREDICTED: tubulin delta chain isoform X3 [Heterocephalus glaber]

Length: 452 aa      View alignments
>XP_004870423.1
MSIVTVQLGQCGNQIGFEVFNALFTDSQSSQGLCSKRENEAYQASCKERFFREEKGVPIARAVLVDMEPKVINHVLSKAAQSGQWKYSQHACFCQKQGSGNNWAYGYSVHGPKHEDSIMNLIQKEVEKCDSLNGFFIIMSIAGGTGSGLGAFLTQHLHDHYSNALKMNQIIWPYGTGEVIVQNYNSILTLSHLYRSSDALLIHENDTIHKICAKLMNIKQISFGDINQVLAHQLGSVFQPTYSVEGSFHYRRNPLGDLMENLVPHPEFKMLGVRNIPQMSENSLPYSTFTWAGLLKHLRQMLISNAKMEEGIDWQVRPPLPGLPPLGKMSQNREQHFNTSLANLVILRGKDVQNANLEGFKDPALYTSWLGPDEAFTVWKTQRAFSRYEKSAALVSNSQFFVKPLDTIVGKAWNMFASKAYVHQYTKFGIEEEGFLDSFTLLEQVVASYRNL