Details from NCBI annotation

Gene Symbol Vmp1
Gene Name vacuole membrane protein 1, transcript variant X3
Entrez Gene ID 101721487

Database interlinks

Part of NW_004624871.1 (Scaffold)

For more information consult the page for NW_004624871.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VMP1 ENSCPOG00000014728 (Guinea pig)

Gene Details

vacuole membrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013269, Guinea pig)

Protein Percentage 97.04%
CDS Percentage 94.99%
Ka/Ks Ratio 0.11021 (Ka = 0.0168, Ks = 0.1529)

VMP1 ENSG00000062716 (Human)

Gene Details

vacuole membrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000262291, Human)

Protein Percentage 97.29%
CDS Percentage 93.19%
Ka/Ks Ratio 0.05521 (Ka = 0.0141, Ks = 0.2552)

Vmp1 ENSMUSG00000018171 (Mouse)

Gene Details

vacuole membrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000018315, Mouse)

Protein Percentage 95.32%
CDS Percentage 90.31%
Ka/Ks Ratio 0.05876 (Ka = 0.0227, Ks = 0.3855)

Vmp1 ENSRNOG00000003967 (Rat)

Gene Details

vacuole membrane protein 1 (Vmp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005658, Rat)

Protein Percentage 95.57%
CDS Percentage 90.56%
Ka/Ks Ratio 0.05725 (Ka = 0.0214, Ks = 0.3733)

Genome Location

Sequence Coding sequence

Length: 1221 bp    Location: 1533152..1625034   Strand: +
>XM_004870363.1
ATGGCAGAGAATGGAAAAAATTGTGACCAGAGACGTGTAGCAATGAATAAAGAACAACACAATGGAAATTTCACAGACCCCTCTTCAGTGAATGAAAAGAAGAGGAGGGATCGGGAAGAAAGACAGAATATTGTCCTGTGGAGACAACCACTCATTACCTTGCAGTATTTTTCTCTGGAAACCCTTGTAATCTTAAAGGAATGGACCTCAAAATTATGGCATCGTCAAAGCATTGTGGTGTCTTTTTTACTGCTGCTTGCTGTGCTTGTAGCTACGTATTATGTTGAAGGAGCACATCAACAGTATGTGCAGCGTATAGAGAAACAATTTCTTCTGTATGCCTACTGGATAGGCTTGGGAATTTTGTCTTCTGTGGGGCTTGGAACAGGGCTGCACACTTTTCTGCTTTATCTGGGCCCACACATAGCTTCAGTTACATTAGCTGCTTATGAATGCAATTCAGTTAATTTCCCCGAACCACCCTATCCTGATCAGATTATTTGTCCAGACGAAGAGGGCACGGAAGGAACCATTTCCTTGTGGAGTATCATCTCGAAAGTTAGGATCGAGGCCTGCATGTGGGGTATTGGTACAGCAATCGGAGAGCTGCCTCCATATTTCATGGCCAGGGCAGCTCGCCTCTCAGGTGCTGAACCTGATGATGAAGAGTATCAGGAATTTGAAGAGATGCTGGAACATGCGGAGTCTGCACAGGACTTTCCCTCTCGAGCTAAACTGGCAGTTCAGAGACTCGTACAGAAGGTTGGATTTTTTGGAATATTGGCCTGTGCTTCTATTCCAAATCCTCTATTTGATCTTGCTGGAATAACATGTGGACATTTTCTTGTACCTTTTTGGACCTTCTTTGGTGCAACCCTGATTGGAAAAGCAATAATTAAAATGCATATCCAGAAAATCTTTGTTATTATAACATTCAGCAAGCACATCGTGGAGCAGATGGTGGCTTTCATTGGTGCTGTCCCAGGCATAGGTCCGTCTCTGCAGAAGCCCTTCCAGGAATACCTCGAGGCCCAGCGGCAGAAGCTGCACCACAGGAGCGAGGCGGGTGCGCCCCAGGGAGAAAACTGGCTGTCCTGGATGTTTGAGAAGTTGGTGGTTGTGATGGTGTGTTACTTTGTCCTGTCTATCATTAACTCCATGGCACAGAGTTATGCCAAACGAATTCAGCAGCGGTTGAACTCAGAGGAGAAGACTAAATAA

Related Sequences

XP_004870420.1 Protein

Vmp1 PREDICTED: vacuole membrane protein 1 isoform X3 [Heterocephalus glaber]

Length: 406 aa      View alignments
>XP_004870420.1
MAENGKNCDQRRVAMNKEQHNGNFTDPSSVNEKKRRDREERQNIVLWRQPLITLQYFSLETLVILKEWTSKLWHRQSIVVSFLLLLAVLVATYYVEGAHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAYECNSVNFPEPPYPDQIICPDEEGTEGTISLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQDFPSRAKLAVQRLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIITFSKHIVEQMVAFIGAVPGIGPSLQKPFQEYLEAQRQKLHHRSEAGAPQGENWLSWMFEKLVVVMVCYFVLSIINSMAQSYAKRIQQRLNSEEKTK