Sequence details NCBI ID: XM_004870353.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gdpd1
Gene Name glycerophosphodiester phosphodiesterase domain containing 1
Entrez Gene ID 101718687

Database interlinks

Part of NW_004624871.1 (Scaffold)

For more information consult the page for NW_004624871.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GDPD1 ENSCPOG00000011797 (Guinea pig)

Gene Details

glycerophosphodiester phosphodiesterase domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010611, Guinea pig)

Protein Percentage 96.82%
CDS Percentage 96.18%
Ka/Ks Ratio 0.13838 (Ka = 0.015, Ks = 0.1087)

GDPD1 ENSG00000153982 (Human)

Gene Details

glycerophosphodiester phosphodiesterase domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000284116, Human)

Protein Percentage 93.95%
CDS Percentage 93.1%
Ka/Ks Ratio 0.17406 (Ka = 0.0319, Ks = 0.1831)

Gdpd1 ENSMUSG00000061666 (Mouse)

Gene Details

glycerophosphodiester phosphodiesterase domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020804, Mouse)

Protein Percentage 92.99%
CDS Percentage 87.05%
Ka/Ks Ratio 0.07373 (Ka = 0.038, Ks = 0.5159)

Gdpd1 ENSRNOG00000005596 (Rat)

Gene Details

glycerophosphodiester phosphodiesterase domain containing 1 (Gdpd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000048572, Rat)

Protein Percentage 91.4%
CDS Percentage 86.84%
Ka/Ks Ratio 0.08903 (Ka = 0.0453, Ks = 0.5086)

Genome Location

Sequence Coding sequence

Length: 945 bp    Location: 1102799..1149910   Strand: +
Raw sequence   
>XM_004870353.1
ATGTCGTCCACCGCAGCTTTTTGCCTTCTCTCTACCCTGGGAGGGTACTTGGTGACCTCATTCTTGTTGCTTAAATACCCGACCTTGCTGCACCAGAAGAAGAAGCAGCGATTCCTCAGTAAACACATTTCTCACCGCGGAGGTGCCGGAGAAAATTTGGAGAATACAATGGCAGCTTTTCAGCATGCAGTTACAATTGGAACTGACATGCTAGAATTGGACTGCCATATCACAAAAGATGAGCAAGTTGTAGTGTCACATGATGAGAACCTAAAGAGATCAACTGGGATCAATGCAAATGTCTCTGATCTCAAGTATTGTGAGCTCCCACCTTACCTTGGCAAACTGGATGTCCCATTTCAAAGAGCGTGCCAATGTGAAGGAAAAGATACCCGAATTCCATTACTGAAGGAAGTTTTTGAGGCCTTTCCTAACACCCCCATTAACATCGATATCAAAGTCAACAACAATGTGCTAATTAAGAAGGTTTCAGAATTGGTGAAGCAGTATAAGCGAGAACACTTAACAGTGTGGGGTAATGCAAGTTATGAAATTGTGGAAAAGTGCTACAAAGAGAATTCAGATATTCCTATACTCTTCAGTCTACAACGTGTTCTGCTTATTCTTGGCCTTTTCTTCACTGGCCTCTTGCCTTTTGTGCCTATTCGAGAGCAGTTTTTTGAAATCCCAATGCCTGCTATCACATTGAAGTTAAAAGAGCCCCACACCATGTCCAGAAGTCAAAAGTTTCTCATCTGGCTTTCTGATACATTATTAATGAGGAAAGCTTTATTTGACCACCTCACTGCCCGAGGCATTCAAGTGTATGTTTGGGTATTAAATGACGAACAAGAGTACAAAAGAGCTTTTGATCTGGGAGCAACTGGAGTCATGACTGACTATCCAACAAAGCTTAAGGATTTTTTACATAATTTTCCAGCATAG

Related Sequences

XP_004870410.1 Protein

Gdpd1 PREDICTED: glycerophosphodiester phosphodiesterase domain-containing protein 1 [Heterocephalus glaber]

Length: 314 aa      View alignments
>XP_004870410.1
MSSTAAFCLLSTLGGYLVTSFLLLKYPTLLHQKKKQRFLSKHISHRGGAGENLENTMAAFQHAVTIGTDMLELDCHITKDEQVVVSHDENLKRSTGINANVSDLKYCELPPYLGKLDVPFQRACQCEGKDTRIPLLKEVFEAFPNTPINIDIKVNNNVLIKKVSELVKQYKREHLTVWGNASYEIVEKCYKENSDIPILFSLQRVLLILGLFFTGLLPFVPIREQFFEIPMPAITLKLKEPHTMSRSQKFLIWLSDTLLMRKALFDHLTARGIQVYVWVLNDEQEYKRAFDLGATGVMTDYPTKLKDFLHNFPA