Sequence details NCBI ID: XM_004870298.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Smurf2
Gene Name SMAD specific E3 ubiquitin protein ligase 2
Entrez Gene ID 101697984

Database interlinks

Part of NW_004624870.1 (Scaffold)

For more information consult the page for NW_004624870.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMURF2 ENSCPOG00000007168 (Guinea pig)

Gene Details

SMAD specific E3 ubiquitin protein ligase 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006465, Guinea pig)

Protein Percentage 99.45%
CDS Percentage 96.23%
Ka/Ks Ratio 0.02355 (Ka = 0.0032, Ks = 0.1379)

SMURF2 ENSG00000108854 (Human)

Gene Details

SMAD specific E3 ubiquitin protein ligase 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000262435, Human)

Protein Percentage 97.99%
CDS Percentage 93.27%
Ka/Ks Ratio 0.05674 (Ka = 0.0152, Ks = 0.2685)

Smurf2 ENSMUSG00000018363 (Mouse)

Gene Details

SMAD specific E3 ubiquitin protein ligase 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000090177, Mouse)

Protein Percentage 97.46%
CDS Percentage 90.33%
Ka/Ks Ratio 0.03868 (Ka = 0.0174, Ks = 0.4499)

Smurf2 ENSRNOG00000014623 (Rat)

Gene Details

SMAD specific E3 ubiquitin protein ligase 2 (Smurf2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019781, Rat)

Protein Percentage 95.77%
CDS Percentage 88.57%
Ka/Ks Ratio 0.06194 (Ka = 0.031, Ks = 0.5005)

Genome Location

Sequence Coding sequence

Length: 2316 bp    Location: 315491..246265   Strand: -
Raw sequence   
>XM_004870298.1
ATGGAGTTGATGTTTGATGAGTACGAGTTTGAAGATCCATTGGATGTATTTGATAATGATGTCACTGGGGCTTTGGCGAAGCAGATTAGGTGGCTGTGGTGGATTGAGGAATTAGTGGGAGTACTCTGTGCAAAAAACTTGGTGAAGAAGGATTTTTTCCGACTTCCTGATCCATTTGCTAAGGTAGTGGTTGATGGATCTGGACAATGCCATTCTACAGATACTGTGAAGAATACACTCGATCCAAAATGGAATCAACATTATGACCTGTATATTGGAAAGTCTGATTCAGTTACAATCAGTGTATGGAATCACAAGAAGATCCATAAAAAACAAGGTGCTGGATTTCTTGGTTGTGTTCGTCTTCTTTCCAATGCCATCAACCGCCTCAAAGACACTGGTTATCAGAGGTTGGATCTATGCAAACTTGGGCCAAATGACAATGATACAGTTAGAGGACAGATAGTAGTAAGTCTTCAGTCCAGAGACCGAATAGGCACAGGAGGACAAGTTGTGGACTGCAGTCGTTTGTTTGATAATGATTTACCAGACGGCTGGGAAGAAAGGAGAACTGCCTCTGGACGAATCCAATATCTAAACCACATAACAAGAACTACACAATGGGAACGCCCAACAAGACCGGCATCTGAATATTCTAGTCCTGGCAGACCTCTTAGCTGCTTTGTTGATGAGAACACTCCAATTAGTGGAACAAATGGTGCAACATGTGGACAGTCTTCAGATCCCAGGCTGGCAGAGAGGAGAGTCAGGTCACAGCGACATAGAAATTACATGAGCAGGACACATTTACATACTCCTCCAGACCTACCAGAAGGCTATGAACAGAGGACAACGCAGCAAGGTCAGGTGTATTTCTTACACACTCAGACTGGTGTGAGCACATGGCATGATCCGAGAGTACCTAGGGATCTTAGCAACATCAATTGTGAAGAGCTTGGTCCTTTGCCTCCTGGATGGGAGATCCGCAATACAGCAACAGGCAGAGTTTATTTCGTTGACCATAACAACAGAACAACACAATTTACAGATCCTCGGCTCTCTGCTAACTTGCATTTAGTTTTAAATCGGCAGAACCAGTTGAAAGACCAACAGCAACAGCAAGTGGTGTCATTATGCCCGGATGATACAGAGTGCCTGACAGTACCAAGATACAAGCGAGACCTGGTTCAGAAACTAAAAATCTTGCGCCAAGAACTTTCCCAGCAACAGCCTCAGGCTGGCCACTGCCGCATTGAGGTTTCCAGGGAAGAGATTTTTGAGGAGTCATATCGACAGGTCATGAAAATGAGACCAAAAGATCTCTGGAAGCGATTAATGATAAAATTTCGTGGAGAAGAAGGCCTTGATTATGGAGGGGTTGCTAGGGAGTGGTTGTATCTCTTGTCACATGAGATGTTGAATCCATACTATGGCCTGTTCCAGTACTCAAGAGATGATATCTACACATTACAGATCAATCCTGATTCTGCTGTTAATCCAGAACATTTGTCGTATTTCCACTTTGTTGGACGAATAATGGGAATGGCTGTGTTTCATGGACATTACATTGATGGTGGTTTTACACTGCCTTTTTATAAACAGTTGCTTGGAAAGTCAATTACTTTGGATGACATGGAGTTAGTTGATCCAGACCTTCATAATAGTTTGGTGTGGATACTTGAGAATGATATTACAGGTGTTTTGGACCATACCTTCTGTGTTGAACATAATGCATATGGTGAAATTATCCAGCATGAACTTAAACCAAATGGCAAAAGTATCCCTGTTACTGAAGAAAATAAAAAAGAGTATGTCAGATTGTATGTGAACTGGAGATTTTTACGAGGCATTGAGGCTCAATTCCTGGCTCTGCAGAAAGGATTTAATGAAGTAATTCCACAGCATCTGCTGAAGACATTTGATGAGAAGGAGTTAGAGCTCATTATTTGTGGACTTGGAAAGATAGATGTCAATGATTGGAAAGTAAACACCCGGTTAAAGCACTGTACACCAGACAGCAATATTGTCAAGTGGTTCTGGAAAGCTGTGGAGTTTTTTGATGAAGAGCGGCGAGCGCGATTGCTACAGTTTGTAACAGGATCATCTAGAGTGCCTCTGCAGGGCTTCAAAGCACTACAAGGTGCTGCAGGCCCACGGCTCTTCACCATACACCAGATCGACGCCTGCACTAACAATCTGCCCAAAGCCCACACGTGCTTCAATCGAATAGACATTCCGCCCTATGAAAGCTATGAAAAGCTCTATGAAAAGCTGCTAACAGCCATTGAAGAAACATGTGGATTTGCTGTGGAATGA

Related Sequences

XP_004870355.1 Protein

Smurf2 PREDICTED: E3 ubiquitin-protein ligase SMURF2 [Heterocephalus glaber]

Length: 771 aa      View alignments
>XP_004870355.1
MELMFDEYEFEDPLDVFDNDVTGALAKQIRWLWWIEELVGVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPKWNQHYDLYIGKSDSVTISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLCKLGPNDNDTVRGQIVVSLQSRDRIGTGGQVVDCSRLFDNDLPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEYSSPGRPLSCFVDENTPISGTNGATCGQSSDPRLAERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNRQNQLKDQQQQQVVSLCPDDTECLTVPRYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKSITLDDMELVDPDLHNSLVWILENDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTEENKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKELELIICGLGKIDVNDWKVNTRLKHCTPDSNIVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDACTNNLPKAHTCFNRIDIPPYESYEKLYEKLLTAIEETCGFAVE