Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101724076

Database interlinks

Part of NW_004624870.1 (Scaffold)

For more information consult the page for NW_004624870.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ABCA9 ENSCPOG00000011990 (Guinea pig)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 9

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010788, Guinea pig)

Protein Percentage 87.4%
CDS Percentage 90.23%
Ka/Ks Ratio 0.31168 (Ka = 0.0686, Ks = 0.2202)

ABCA9 ENSG00000154258 (Human)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 9

External Links

Gene Match (Ensembl Protein ID: ENSP00000342216, Human)

Protein Percentage 82.51%
CDS Percentage 86.39%
Ka/Ks Ratio 0.30716 (Ka = 0.1001, Ks = 0.326)

Abca9 ENSMUSG00000041797 (Mouse)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 9

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000036338, Mouse)

Protein Percentage 77.14%
CDS Percentage 80.78%
Ka/Ks Ratio 0.25275 (Ka = 0.1401, Ks = 0.5543)

Abca9 ENSRNOG00000004295 (Rat)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 9

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005775, Rat)

Protein Percentage 76.44%
CDS Percentage 79.72%
Ka/Ks Ratio 0.25151 (Ka = 0.1492, Ks = 0.5931)

Genome Location

Sequence Coding sequence

Length: 4875 bp    Location: 3993497..3924169   Strand: -
>XM_004870288.1
ATGAGCAAGAGACACATATGCGTGCATCAACAAATGTGGACTCTTCTCTGCAAGAACTGCCTTAAAAAGTGGAGAATGAAAAGAGAGACCATGTTGGAATGGCTTTTATCATTTCTTCTAGTACTGTTTGCATTCCTATTTTCTTCCAATTTACATCAAGTCAATGACTCTTCCCAAATACCTGCGATGGATCTAGGACGTGTAGATAGTTTCAATGATTCTAATTATATTATTGCATTCGCACCCGAATCCAAAACCACCCAAGAGATAATGAGCAAGGTAGCTTCAGCTCCATTCATGAAAGGAAGGACAATCATGGGATGGCCTGATGAAAAGAGCATGACTGAACTGAATTTAAATTATTCAACAGATGCAGTGAGAGTTATCTTTAATGATATGTTCTCATATCATTTGAAATTTTCTTGGGGACATAGAATCCCTAAGATCAAGGAACACAAAGACCATTCAGCTCATTGTCAAGCAGTGGATGAAAAAATCACATGTGAAAGTTCAATGTTTTGGGAGAAAGGTTTTGTAGCTTTTCAAGCTGCCATTAATGCTGCTATCATAGAAATCGCAGTGAATCATTCAATAATGGAAGAGCTGATGTCAATTACTGGTGTAAATATGAAGATACTGCCTTTTATTGCTCAAGGAGGAATTACAACTGATTTTTTCATTTTCTTCTGCATTATTTCTTTTTCTTCATTTATATATCATTTGTCAGTCAATGTTACACAAGAAAGACAATACATTAAATCACTGATGACAATGATGGGACTTCGAGAATCAGCATTCTGGCTTTCCTGGGGCTTCATGTATGCTGGCTTCATCCTTGTCATGGCTGTTTTGATGGCTCTTATTGTAAAATCTACCCAAATTGTTGCGTTAACTGGCTTCATGGTGGTCTTCATTCTCTTTTTCCTCTATGGCTTGTCTTTGATAACTTTGGCTTTCTTGATGAGCATGTTGATAAAGAAACCTCACCTCACTGGTTTGGCCGTATTTCTGCTTATCATTTTTTGGGGCAGCCTGGGATTCACTGCCTTGTACAGACATCTTCCTGCATTTTTGGAATGGATCTTATGTCTTCTTAGTCCATTTGCTTTCACTGCTGGAATGGCCCAGCTTATACATTTGGACTATGATGTGAATTCTAATGTCCATTTGGATGCTTCAAACAACTCATTCATAATAATAGCTACTCTTTTTATGCTGGTTTTTGACGCTCTTCTCTATTTGATATTGACATTATATTTTGACAAAATTTTGCCCACCCAATATGGACAGCGACATTCTGCCATGTTTTTCCTAAAGTCCCCTTTTTGGTGTAAATATCAAAGAACTGATCATGCGGTACTTGAGAATGAAATAGAATCTGATCCTTCATCCAATGACTCCTTCGAACTAGTGCCTGCAGAATTCCATGGAAAAGAAGCCATCAGAATCAAAAACCTTAAAAAAGAATATAAAGGACAGTGTGAAAAAGTAGAAGCTTTGAAAGGTCTGGTACTTGACATATATGAAGGCCAGATCACTGTCCTCCTTGGTCACAGCGGAGCTGGGAAAACCACCTTGTTAAACCTGCTTAGTGGACTGTCACTCCCAACATCAGGTTCTATCACTATCTATAATCACACACTTTCAGAAATGGCTGACTTTGAAACTGTCAGCAAGCTCATCGGAGTTTGTCCACAGTCCAATGTACAATTTGGCTTTCTCACCGTGAAAGAAAATCTCAGGTTGTTTGCTAAAGTAAGAGGGATTTTGCCACATGAAGTGGAACAAGAGGTACAGCAAATTCTACGGTACTTAGAGATGGAAAATATTCAGGACATTCTTGCTGAAAATTTAAGTGGTGGTCAAAAAAGGAAACTAACTTTTGGGATTGCCATTTTAGGAGATCCTCAGGTTTTGCTATTGGATGAACTAACTGCTGGATTGGATCCTCTTTCAAGGCACCACTTATGGAATTTCCTGAAAGAGAGGAAATCAGACAGAGTAATTCTCTTCAGTACCCAGTTTATGGATGAGGCTGATATCTTAGCTGATAGGAAGGTATTGATATCCCATGGCAGGCTGAAGTGCGCTGGTTCTTCTCTGTTCCTGAAGAAGAGGTGGGGTATTGGCTACCATTTAAGTTTGCATCTGAATGAAATGTGTGATCCAAAGAGTGTCACGTCACTGGTTAAACAGCACATCCCTGATGCCAAATTAACAGAGCAAAGTGAAGAAAAACTTGTTTATATTTTGCCTTTGGAAAGGACAAACAAATTTCCAGACCTTTACAGGGATCTTGATAGATGTCCTAACAAAGGCATTGAGAATTATGGTGTTTCCATGACAACTTTGAATGAGGTGTTCCTGAAGTTAGAAGGAAAATCAACTATTGATGAATCAGATATTGCAAGTTGGGGACAATCACAAAGTGATGAGATAAAAGACATGGCAAGCCTTGTTGTGCTGGAACAAGTTTTGTCGTCCCTCCATGTAAAAAGGAAAATAGCAGGTGGCATGGCACTCTGGAGGCAGCAGCTCTGTGCAATAGCAAAAGTTCGCTTTCTGAAGTTAAAGAATGAAAGAAAAAGCCTGTTGGCCATATTATTGCTTTTTGGGATTAGCTTTTTCCCTCAACTCCTGGAACACTTATTCTATGAATTATATCAAAAAAGTTACTCTTGGGAGCTATCTCCAAATATATACTTCCTCTCACCAGGACAACCTCCACAGGATCCTCTGACTCATTTACTGGTCATCAATAAAACAGGATCCAGCATTGATAACTTTATACAAGCACTGGGGCGACAGAACATAGCGTTGGAAGTGGATGCCTTTGGAATTAGAAATGGCACAGAGGAGCTGTCTTACAATGGAGCCATCACAGTGTCAAGGGATAAAGAGGATCACAGATTTTCAATAGCCTGTAATACTAAGAGGCTAAATTGTTTTCCTGTCCTCATTGATATTATCAGCAATGGGTTACTTGGAACATTTAATTCTACAGAACACATTCAGACAGATAGAAGCACATTTTTTGCAGAACATATGTCTTATGACTATGGGTACCTGAGCAGCGCCTTCTTCTGGATACCACTGGCTGCCTGTTTCACTCCTTACATTGCCATGAGCAGCATTGACGACACTAAAAAAAAAGTTCACTCCCAGCTATGGATTTCAGGCCTGTATCCTTCAGCTTACTGGTTTGGACAGGCACTGGTGGATATTCCCCTCTACTTTTTGATTCTCCTTCTGATGCAAATAATGGATTATGTTTTTAGCCCAGAAGAGATTATATTCATAATTCAAAACCTGTTAATCCAGATCCTGTGTAGCATTGGATATGTCTCATCTCTTGTTTTCTTGACATATGTGATTTCATTTATTTTTCGCAATGGCAGAAAAAATAGTGGCATTTGGTCATTTTTCTTCTTAACTGTCACCATCTTCACAATAGTTGCTACTGATCTAAGTGAATATGGATTTCTGAGGCTATTTTTCTGCACTATATTAATACCACCCTTCACACTGATTGGTTCTCTATCCATGTTTTCTGAGATTTCTTATGACTCTGCAGATTACTTAGGAACTTCAGAATCTCAAGTAGTATTTCTGGCATTGCTAATACCTTACTTCCAGTTTTTCATTTTCCTTTTTGTTCTACGATGTCTGGAAGGACACATTAGGAAGAAATCGTTGCAAAAGGACCCTGTGTTCAGAATTTCTCCAAGAAGCAGTGATGTTTTTCCAAACCCAGAAGAACCTGAAGGAGAAGATGAAGATGTTAACATGGAAAGAGTAAGAACAACAAATGCTATGGCCGTCTTGGATGAGGAAGAGAAACCAGTTATCACTGCCAGCTGTCTCCGGAAGGAATATGCAGGCAAAAAGAAAAATTGCTTTTCCAGAGGGAAGAAAAAAATTGCCACAAGAAACGTCTCTTTCTGTGTTAAAAAAGGTGAAGTTGTAGGGCTTTTGGGACACAACGGAGCTGGTAAAAGTACAATGATTAAAATGATAACTGGAGATATAAAACCAACTGCAGGGCAGGTGATTTTGAAAAGGAGCAGTGAAGGGGACACCCAGGAGTTCTTGGGGTACTGTCCTCAGGAGAATGTGCTGTGGCCCAACCTGACAGTGAGGGAACACCTGGAAGTATATGCTGCTGTGAAAGGGCTGAAGAAAAGGGATGCCACGGTCACCATTACACAGTTGGTGGAAGCCCTCAAGCTGCAGGACCAGCTGAAGACACCTGTGAAGACCTTGTCAGAGGGAATAAAGAGAAAGCTGTGCTTTGTGCTGAGCATCCTGGGAAACCCATCAGTGGTGCTTCTGGATGAGCCATCCACTGGGATGGACCCCGAGGGCCAGCAGCAGATGTGGCAGGCAATCAGGGCCACCTTTAGACACGCGGAGAGGGGCGCCCTCCTGACGACCCATTACATGGCGGAGGCCGAGGCTGTTTGTGATCGCATAGCCATCATGGTGTCCGGGAGGCTGAGGTGTATCGGTTCCACCCAACACCTAAAGAGTAAATTTGGCAAAGACTACCTGCTGGAGATGAAGGTGAGGACCCTCACGCAGGTGGAGCCCCTCCATGAAGAGATCCTGAGGCTCTTCCCCCAGGCTGCTAGGCAGGAAAGGTACTCCTCTCTGATGGTCTACAAGTTGCCTGTTGAAGATGTACAACCTTTATCACAGACTTTCTCCAAATTAGAGATCGTTAAACAGAGCTTTGACCTGGAGGAGTACAGCCTCTCGCAGTCCACCCTGGAGCAGCTTTTCCTGGAGCTCTCCAAAGAGCAGGAACTGTATGACTTTGAAGAGGAACTGGATCCCTCTGTGAAGTGGAAGCTCCTCCCACAGGAGGAGCCCTAA

Related Sequences

XP_004870345.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 9 [Heterocephalus glaber]

Length: 1624 aa      View alignments
>XP_004870345.1
MSKRHICVHQQMWTLLCKNCLKKWRMKRETMLEWLLSFLLVLFAFLFSSNLHQVNDSSQIPAMDLGRVDSFNDSNYIIAFAPESKTTQEIMSKVASAPFMKGRTIMGWPDEKSMTELNLNYSTDAVRVIFNDMFSYHLKFSWGHRIPKIKEHKDHSAHCQAVDEKITCESSMFWEKGFVAFQAAINAAIIEIAVNHSIMEELMSITGVNMKILPFIAQGGITTDFFIFFCIISFSSFIYHLSVNVTQERQYIKSLMTMMGLRESAFWLSWGFMYAGFILVMAVLMALIVKSTQIVALTGFMVVFILFFLYGLSLITLAFLMSMLIKKPHLTGLAVFLLIIFWGSLGFTALYRHLPAFLEWILCLLSPFAFTAGMAQLIHLDYDVNSNVHLDASNNSFIIIATLFMLVFDALLYLILTLYFDKILPTQYGQRHSAMFFLKSPFWCKYQRTDHAVLENEIESDPSSNDSFELVPAEFHGKEAIRIKNLKKEYKGQCEKVEALKGLVLDIYEGQITVLLGHSGAGKTTLLNLLSGLSLPTSGSITIYNHTLSEMADFETVSKLIGVCPQSNVQFGFLTVKENLRLFAKVRGILPHEVEQEVQQILRYLEMENIQDILAENLSGGQKRKLTFGIAILGDPQVLLLDELTAGLDPLSRHHLWNFLKERKSDRVILFSTQFMDEADILADRKVLISHGRLKCAGSSLFLKKRWGIGYHLSLHLNEMCDPKSVTSLVKQHIPDAKLTEQSEEKLVYILPLERTNKFPDLYRDLDRCPNKGIENYGVSMTTLNEVFLKLEGKSTIDESDIASWGQSQSDEIKDMASLVVLEQVLSSLHVKRKIAGGMALWRQQLCAIAKVRFLKLKNERKSLLAILLLFGISFFPQLLEHLFYELYQKSYSWELSPNIYFLSPGQPPQDPLTHLLVINKTGSSIDNFIQALGRQNIALEVDAFGIRNGTEELSYNGAITVSRDKEDHRFSIACNTKRLNCFPVLIDIISNGLLGTFNSTEHIQTDRSTFFAEHMSYDYGYLSSAFFWIPLAACFTPYIAMSSIDDTKKKVHSQLWISGLYPSAYWFGQALVDIPLYFLILLLMQIMDYVFSPEEIIFIIQNLLIQILCSIGYVSSLVFLTYVISFIFRNGRKNSGIWSFFFLTVTIFTIVATDLSEYGFLRLFFCTILIPPFTLIGSLSMFSEISYDSADYLGTSESQVVFLALLIPYFQFFIFLFVLRCLEGHIRKKSLQKDPVFRISPRSSDVFPNPEEPEGEDEDVNMERVRTTNAMAVLDEEEKPVITASCLRKEYAGKKKNCFSRGKKKIATRNVSFCVKKGEVVGLLGHNGAGKSTMIKMITGDIKPTAGQVILKRSSEGDTQEFLGYCPQENVLWPNLTVREHLEVYAAVKGLKKRDATVTITQLVEALKLQDQLKTPVKTLSEGIKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIRATFRHAERGALLTTHYMAEAEAVCDRIAIMVSGRLRCIGSTQHLKSKFGKDYLLEMKVRTLTQVEPLHEEILRLFPQAARQERYSSLMVYKLPVEDVQPLSQTFSKLEIVKQSFDLEEYSLSQSTLEQLFLELSKEQELYDFEEELDPSVKWKLLPQEEP