Details from NCBI annotation

Gene Symbol Psmd12
Gene Name proteasome (prosome, macropain) 26S subunit, non-ATPase, 12, transcript variant X1
Entrez Gene ID 101714054

Database interlinks

Part of NW_004624870.1 (Scaffold)

For more information consult the page for NW_004624870.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMD12 ENSCPOG00000004023 (Guinea pig)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003629, Guinea pig)

Protein Percentage 99.34%
CDS Percentage 94.23%
Ka/Ks Ratio 0.01181 (Ka = 0.003, Ks = 0.2569)

PSMD12 ENSG00000197170 (Human)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 12

External Links

Gene Match (Ensembl Protein ID: ENSP00000348442, Human)

Protein Percentage 98.9%
CDS Percentage 93.35%
Ka/Ks Ratio 0.01666 (Ka = 0.0051, Ks = 0.3034)

Psmd12 ENSMUSG00000020720 (Mouse)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 12

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021063, Mouse)

Protein Percentage 97.81%
CDS Percentage 88.74%
Ka/Ks Ratio 0.01783 (Ka = 0.0111, Ks = 0.6246)

Psmd12 ENSRNOG00000003117 (Rat)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 (Psmd12), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004283, Rat)

Protein Percentage 98.25%
CDS Percentage 89.04%
Ka/Ks Ratio 0.01522 (Ka = 0.0091, Ks = 0.5982)

Genome Location

Sequence Coding sequence

Length: 1371 bp    Location: 1057455..1083547   Strand: +
>XM_004870257.1
ATGGCGGACGGCGGTTCGGAGCGGGCTGATGGGCGCATTGTCAAGATGGAGGTGGACTACAGCGCCACGGTGGATCAGCGTCTGCCTGAGTGCGAGAAGCTGGCCAAGGAAGGAAGACTTCAAGAAGTCATTGAAACCCTTCTTTCTTTAGAAAAACAGACCCGTACTGCTTCAGATATGGTGTCTACATCTCGCATCTTAGTTGCGGTAGTGAAGATGTGCTATGAGGCTAAAGAATGGGATTTGCTTAATGAAAATATCATGCTTTTGTCAAAAAGGAGGAGTCAGTTAAAACAAGCTGTTGCAAAAATGGTTCAACAGTGCTGTACTTATGTTGAGGAAATCACAGACCTCCCAGTCAAACTTCGGTTAATTGATACCCTACGAATGGTTACAGAAGGAAAGATTTATGTTGAAATTGAGCGTGCTCGATTGACTAAAACATTAGCAACCATAAAAGAGCAAAATGGTGATGTCAAAGAAGCAGCCTCCATTTTACAAGAGTTACAGGTGGAAACCTATGGATCAATGGAAAAAAAAGAGCGAGTGGAGTTTATTTTGGAGCAAATGCGGCTCTGCCTTGCTGTGAAGGATTACATTCGGACACAGATCATCAGCAAGAAAATTAATACGAAGTTTTTCCAGGAAGAAAACACAGAGAAATTAAAGTTGAAATACTATAATTTAATGATTCAGCTGGATCAGCATGAGGGATCCTATCTGTCTATTTGTAAGCACTACAGGGCAATATATGATACTCCCTGTATACAGGCAGAAAATGAAAAGTGGCAACAGGCTCTGAAAAGTGTTGTTCTTTATGTTATCCTGGCTCCTTTTGACAATGAACAGTCAGATTTGGTTCACCGAATAAGTGGTGACAAGAAGTTAGAAGAAATTCCCAAATACAAGGATCTTTTAAAGCTTTTCACCACAATGGAGTTGATGCGTTGGTCCACACTTGTTGAGGACTATGGGATGGAATTAAGGAAAGGTTCCCTCGAGAATCCTGCAACTGATGTTTTTGCCTCTACAGAAGAAGGTGAAAAAAGGTGGAAAGATTTGAAGAACAGAGTCGTTGAACATAATATTAGAATAATGGCCAAGTACTACACTCGGATTACAATGAAAAGGATGGCACAACTTCTGGATCTGTCTGTTGATGAGTCAGAGGCTTTTTTGTCGAATTTAGTAGTTAACAAGACCATCTTTGCTAAAGTTGACAGGTTGGCAGGAATTATCAACTTCCAGAGACCCAAGGATCCAAATAATTTATTAAATGACTGGTCTCAGAAACTGAACTCATTGATGTCTCTGGTTAACAAAACCACACACCTCATAGCCAAAGAGGAGATGATACATAATCTACAATAA

Related Sequences

XP_004870314.1 Protein

Psmd12 PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 isoform X1 [Heterocephalus glaber]

Length: 456 aa      View alignments
>XP_004870314.1
MADGGSERADGRIVKMEVDYSATVDQRLPECEKLAKEGRLQEVIETLLSLEKQTRTASDMVSTSRILVAVVKMCYEAKEWDLLNENIMLLSKRRSQLKQAVAKMVQQCCTYVEEITDLPVKLRLIDTLRMVTEGKIYVEIERARLTKTLATIKEQNGDVKEAASILQELQVETYGSMEKKERVEFILEQMRLCLAVKDYIRTQIISKKINTKFFQEENTEKLKLKYYNLMIQLDQHEGSYLSICKHYRAIYDTPCIQAENEKWQQALKSVVLYVILAPFDNEQSDLVHRISGDKKLEEIPKYKDLLKLFTTMELMRWSTLVEDYGMELRKGSLENPATDVFASTEEGEKRWKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWSQKLNSLMSLVNKTTHLIAKEEMIHNLQ