Details from NCBI annotation

Gene Symbol Papd4
Gene Name PAP associated domain containing 4, transcript variant X1
Entrez Gene ID 101725038

Database interlinks

Part of NW_004624869.1 (Scaffold)

For more information consult the page for NW_004624869.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PAPD4 ENSCPOG00000005462 (Guinea pig)

Gene Details

PAP associated domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004917, Guinea pig)

Protein Percentage 94.42%
CDS Percentage 94.49%
Ka/Ks Ratio 0.1884 (Ka = 0.0271, Ks = 0.1439)

PAPD4 ENSG00000164329 (Human)

Gene Details

PAP associated domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000397563, Human)

Protein Percentage 95.66%
CDS Percentage 95.04%
Ka/Ks Ratio 0.14341 (Ka = 0.0216, Ks = 0.1509)

Papd4 ENSMUSG00000042167 (Mouse)

Gene Details

PAP associated domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000048124, Mouse)

Protein Percentage 90.91%
CDS Percentage 89.94%
Ka/Ks Ratio 0.149 (Ka = 0.0479, Ks = 0.3216)

Papd4 ENSRNOG00000012099 (Rat)

Gene Details

PAP associated domain containing 4 (Papd4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016135, Rat)

Protein Percentage 91.32%
CDS Percentage 90.22%
Ka/Ks Ratio 0.14696 (Ka = 0.0458, Ks = 0.3116)

Genome Location

Sequence Coding sequence

Length: 1455 bp    Location: 4089282..4147211   Strand: +
>XM_004870213.1
ATGTTCCCGAACTCAATTTTGGGTCGCCCGCCCTTTACTCCAAACCATCAACAACATAATAACTTCTTCACCCTGTCGCCAACTCTTTATTCACACCAGCAGCTTATTGATGCACAGTTCAACTTCCAGAATGCAGACTTGTCTAGAGCTTTGTCATTACAGCAACTGACATATGGAAATGTCAGTCCAATACAGACCTCAGCATCCCCAATATTTCGAGGAAGGAAGAGATTAAGCGATGAAAAAAACCTGCCTCTTGATGGTAAACGGCAGCGATTCCATTCACCCCACCAAGACCCAACTATAGTTAACCAGATAGTGCCTTTATCAGGTGAAGGAAGATACTCAATGCCGCCATTGTTTCATACACCCTATGTACCAGAGATAGTCAGATGTGTTCCACCTTTTCGAGAAATATCATTTTTAGAACCTAGAGAAATCACACTGCCCGAGGCCAAAGATAAGTTGAGTCAGCAGATACTGGAGTTATTTGAAACATGTCAGCAGCAAATAAGTGACTTAAAGAAGAAAGAGCTCTGTCGAACACAGCTGCAGAGAGAAATTCAGCTGCTTTTTCCACAAAGCAGACTTTTTTTGGTTGGGTCTTCTCTAAATGGATTTGGTACCCGGAGTAGTGATGGTGATTTATGCCTAGTTGTTAAAGAAGAACCATGTTTTTTTCAGGTAAATCAGAAGACTGAAGCACGGCATATACTCCTGTTAGTCCATAAACACTTCTGTACTAGACTTTCCGGCTACATTGACAGACCTCAACTGATTCGAGCAAAAGTGCCAATTGTGAAGTTCAGGGATAAAGTCAGTTGTGTGGAGTTTGACTTGAATGTAAACAATATTGTTGGAATAAGAAACACATTCCTTCTCAGAACTTATGCATACCTTGAAAATCGAGTTCGGCCATTAGTGCTGGTGATTAAGAAGTGGGCAAATCATCATGAGATAAATGATGCCAGTCGTGGTACTTTAAGCAGCTATAGCCTTGTATTGATGGTTTTGCACTATTTACAAACCCTACCTGAACCCATCCTTCCATCCCTCCAAAAAATTTACCCAGAATCTTTTAGTTCTGCTATACAGTTGCACCTTGTACATCAGACTCCATGTAATATTCCTCCTTACCTCTCAAAGAATGAATCAAGTCTTGGGGACCTCTTACTGGGCTTTCTTAAATATTATGCTACAGAATTTGACTGGAACAGTCAAATGATTTCAGTCCGTGAAGCCAAAGCCATTCCAAGGCCTGATGGTATTGAGTGGAGAAATAAATACATCTGTGTAGAAGAACCTTTTGATGGAACAAATACAGCCAGAGCCGTGCATGAAAAACAGAAGTTTGACATGATCAAAGATCAATTTTTAAAGTCATTTCACAGATTGAAAAACAAAAGAGATTTGAACAGTATACTACCTTTAAGAACTGCTCTCCTGAAAAGATAA

Related Sequences

XP_004870270.1 Protein

Papd4 PREDICTED: poly(A) RNA polymerase GLD2 isoform X1 [Heterocephalus glaber]

Length: 484 aa      View alignments
>XP_004870270.1
MFPNSILGRPPFTPNHQQHNNFFTLSPTLYSHQQLIDAQFNFQNADLSRALSLQQLTYGNVSPIQTSASPIFRGRKRLSDEKNLPLDGKRQRFHSPHQDPTIVNQIVPLSGEGRYSMPPLFHTPYVPEIVRCVPPFREISFLEPREITLPEAKDKLSQQILELFETCQQQISDLKKKELCRTQLQREIQLLFPQSRLFLVGSSLNGFGTRSSDGDLCLVVKEEPCFFQVNQKTEARHILLLVHKHFCTRLSGYIDRPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLVIKKWANHHEINDASRGTLSSYSLVLMVLHYLQTLPEPILPSLQKIYPESFSSAIQLHLVHQTPCNIPPYLSKNESSLGDLLLGFLKYYATEFDWNSQMISVREAKAIPRPDGIEWRNKYICVEEPFDGTNTARAVHEKQKFDMIKDQFLKSFHRLKNKRDLNSILPLRTALLKR