Sequence details NCBI ID: XM_004870187.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tbca
Gene Name tubulin folding cofactor A, transcript variant X1
Entrez Gene ID 101715358

Database interlinks

Part of NW_004624869.1 (Scaffold)

For more information consult the page for NW_004624869.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TBCA ENSCPOG00000012187 (Guinea pig)

Gene Details

tubulin folding cofactor A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010960, Guinea pig)

Protein Percentage 98.15%
CDS Percentage 95.68%
Ka/Ks Ratio 0.04353 (Ka = 0.0082, Ks = 0.1888)

TBCA ENSG00000171530 (Human)

Gene Details

tubulin folding cofactor A

External Links

Gene Match (Ensembl Protein ID: ENSP00000369736, Human)

Protein Percentage 95.37%
CDS Percentage 91.67%
Ka/Ks Ratio 0.07657 (Ka = 0.0265, Ks = 0.3463)

Tbca ENSMUSG00000042043 (Mouse)

Gene Details

tubulin cofactor A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000038781, Mouse)

Protein Percentage 97.22%
CDS Percentage 91.36%
Ka/Ks Ratio 0.0246 (Ka = 0.0123, Ks = 0.4986)

Genome Location

Sequence Coding sequence

Length: 327 bp    Location: 2228086..2153602   Strand: -
Raw sequence   
>XM_004870187.1
ATGGCCGATCCTCGCGTGAGGCAGATCAAGATCAAGACCGGCGTGGTGAAGCGATTGGTCAAAGAAAAAGTGATGTATGAAAAAGAAGCAAAGCAACAAGAAGAAAAGATTGAAAAAATGAAAGCTGAAGATGGCGAAAATTATGCCATTAAAAAGCAGGCAGAGATCCTGCAAGAGTCCCGGATGATGATCCCAGATTGCCAGCGCAGGTTAGAGGCAGCTTATACTGATCTTCAGCAAATATTAGAAAGTGAAAAAGATTTGGAAGAAGCTGAAGAATATAAAGAAGCACGTTTAGTTTTGGATTCAGTGAAGTTAGAAGCCTGA

Related Sequences

XP_004870244.1 Protein

Tbca PREDICTED: tubulin-specific chaperone A isoform X1 [Heterocephalus glaber]

Length: 108 aa      
>XP_004870244.1
MADPRVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMKAEDGENYAIKKQAEILQESRMMIPDCQRRLEAAYTDLQQILESEKDLEEAEEYKEARLVLDSVKLEA