Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101723597

Database interlinks

Part of NW_004624868.1 (Scaffold)

For more information consult the page for NW_004624868.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SIT1 ENSCPOG00000000394 (Guinea pig)

Gene Details

signaling threshold regulating transmembrane adaptor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000345, Guinea pig)

Protein Percentage 83.33%
CDS Percentage 87.36%
Ka/Ks Ratio 0.3261 (Ka = 0.0951, Ks = 0.2915)

SIT1 ENSG00000137078 (Human)

Gene Details

signaling threshold regulating transmembrane adaptor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000259608, Human)

Protein Percentage 78.57%
CDS Percentage 86.22%
Ka/Ks Ratio 0.50282 (Ka = 0.1272, Ks = 0.2529)

Sit1 ENSMUSG00000028460 (Mouse)

Gene Details

suppression inducing transmembrane adaptor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030180, Mouse)

Protein Percentage 75.57%
CDS Percentage 81.06%
Ka/Ks Ratio 0.3131 (Ka = 0.1501, Ks = 0.4795)

Sit1 ENSRNOG00000021546 (Rat)

Gene Details

signaling threshold regulating transmembrane adaptor 1 (Sit1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036171, Rat)

Protein Percentage 75.0%
CDS Percentage 79.36%
Ka/Ks Ratio 0.28217 (Ka = 0.1612, Ks = 0.5712)

Genome Location

Sequence Coding sequence

Length: 594 bp    Location: 5139065..5140068   Strand: +
>XM_004870157.1
ATGAATGTGGCCGAGCCTCAGCTCAGCGCAGTGTGCTTGTGGACCGGTTTCACATCAGCAGTCATGATCAAAGGTGACAACTGCACGGATCCACCAGTGTTGGGATTCCCCTCCATAACCCAGGCCTGGGGTCTGTGGGCCCTCTTAGGGGTTGTGACCCTCCTGCTTCTCATCTCACTGGCTGCACTCTTGTTCCAGTGGACCAATGGCCAGAGCAGAAGCCAGCCGGGGCACGGACACTCCGGAGCGTCTGTGGAAGAGGTCCCCCTGTATGGGAACCTGCACTATCTACAGACAGGACGGCTGTCACAAGAGCCAGGGCCAGGCCAACAGGATCCTTCCCTTGGAGGCTCTGCCAAGGTTGCAGAGGAGGTGATGTGCTACACCAGCCTGCAGCTGCCGCCTCCTCAGGGCTGGATTCCCAGCTCTGGGACTCCCATCAAGTACTCGGAGGTGGTGGTGGACTCTGAACCAAAGCTCCAGGCTCTGGACATCGAGCCAGAGCTCTATGCCTCAGTATGTGCCCAGACCCGCAGAGCCCGGGCCTCCTTCCCAGATCAGGCTTATGCCAACAGCCAGCCTGTGCCCAGCTGA

Related Sequences

XP_004870214.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: signaling threshold-regulating transmembrane adapter 1 [Heterocephalus glaber]

Length: 197 aa      View alignments
>XP_004870214.1
MNVAEPQLSAVCLWTGFTSAVMIKGDNCTDPPVLGFPSITQAWGLWALLGVVTLLLLISLAALLFQWTNGQSRSQPGHGHSGASVEEVPLYGNLHYLQTGRLSQEPGPGQQDPSLGGSAKVAEEVMCYTSLQLPPPQGWIPSSGTPIKYSEVVVDSEPKLQALDIEPELYASVCAQTRRARASFPDQAYANSQPVPS