Details from NCBI annotation

Gene Symbol Rgp1
Gene Name RGP1 retrograde golgi transport homolog (S. cerevisiae), transcript variant X1
Entrez Gene ID 101719375

Database interlinks

Part of NW_004624868.1 (Scaffold)

For more information consult the page for NW_004624868.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RGP1 ENSCPOG00000000412 (Guinea pig)

Gene Details

RGP1 retrograde golgi transport homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000363, Guinea pig)

Protein Percentage 87.98%
CDS Percentage 87.21%
Ka/Ks Ratio 0.33351 (Ka = 0.0929, Ks = 0.2786)

RGP1 ENSG00000107185 (Human)

Gene Details

RGP1 retrograde golgi transport homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000367318, Human)

Protein Percentage 97.19%
CDS Percentage 92.24%
Ka/Ks Ratio 0.05251 (Ka = 0.0141, Ks = 0.2692)

Rgp1 ENSMUSG00000028468 (Mouse)

Gene Details

RGP1 retrograde golgi transport homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000103518, Mouse)

Protein Percentage 95.4%
CDS Percentage 88.66%
Ka/Ks Ratio 0.05429 (Ka = 0.0235, Ks = 0.4326)

Rgp1 ENSRNOG00000016309 (Rat)

Gene Details

Protein Rgp1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021888, Rat)

Protein Percentage 95.4%
CDS Percentage 89.86%
Ka/Ks Ratio 0.06485 (Ka = 0.0234, Ks = 0.3607)

Genome Location

Sequence Coding sequence

Length: 1209 bp    Location: 5045008..5040509   Strand: -
>XM_004870142.1
ATGTTTCCTTCTAGATCTGATTCCGGAGCTGCCATGATTGAGGTGGTAGCAGAGTTGAGCCGGGGTCCTGTATTTCTGGCGGGGGAGGCGCTGGAGTGTGTGGTGACCGTCACCAACCCTTTACCTCCTACAGCCACTTCTGCATCCAGTGAGGCCCTGGCCTGGGCCAGTGCACAGATACACTGCCAGTTCCATGCCAGTGAGAGTCGAGTAGTGCTGCCTCCCCCTGACTCTAGTCAACCAGATGTCCAGCCTGACAGCCAGACTGTCTTTCTGCCTCACCGAGGCGAAAGGGGTCAGTGTATCCTTTCTACCCCACCAAAAATTCTATTTTGTGACCTGAGGCTAGACCCTGGAGAATCAAAGTCATACTCCTACAGTGAAGTGCTGCCCATAGAGGGACCACCCTCCTTTCGCGGTCAGTCAGTCAAGTATGTCTACAAATTGACCATTGGCTGCCAGCGTGTCAACTCACCCATCACTTTACTCAGGGTTCCTTTGAGGGTTCTTGTGCTGACTGGCCTTCAAGATGTCCGGTTTCCCCAGGATGAGGCTGTAGCCCCATCCAGTCCATTCTTGGAGGAGGATGAAGGTGGGAAGAAAGATTCATGGCTAGCTGAGCTGGCTGGGGAGCGTCTCATGGCTGCTACATCCTGCCGAAGCCTCCATTTATACAATATCAGTGATGGCCGAGGGAAAGTTGGGACATTTGGCATCTTCAAATCTGTGTACAGGCTCGGCGAGGATGTGGTGGGGACCTTAAACTTAGGAGAAGGAACTGTAGCTTGTTTGCAGTTTTCAGTAAGCTTACAGACTGAGGAGCGTGTACAGCCTGAGTACCAGCGGCGCCGTGGGGCAGGGGGTGCCCTCTCTGTGTCCCATGTGACTCATGCCCGGCACCAGGAGTCTTGCCTACATACAACTAGAACCAGCTTCTCTCTCCCCATCCCTCTCAGCTCCTCTCCAGGCTTCTGCACTGCTGTTGTGTCCTTGAAGTGGCAATTACATTTTGAATTTGTAACATCTCGAGAACCAGGATTGGTACTGCTGCCCCCTATGGAACAGTCCGAACCTGCCACCTGGACAGGTCCTGAGCAGGTGCCTGTAGATACCTTCAGCTGGGAGCTCCCCATCAAAGTGCTGCCTACAAGCCCCACTCTGGCCTCATATGCTGTCCCGGGCCCCAGCACCAGCACCATAACCATCTGA

Related Sequences

XP_004870199.1 Protein

Rgp1 PREDICTED: retrograde Golgi transport protein RGP1 homolog isoform X1 [Heterocephalus glaber]

Length: 402 aa      View alignments
>XP_004870199.1
MFPSRSDSGAAMIEVVAELSRGPVFLAGEALECVVTVTNPLPPTATSASSEALAWASAQIHCQFHASESRVVLPPPDSSQPDVQPDSQTVFLPHRGERGQCILSTPPKILFCDLRLDPGESKSYSYSEVLPIEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLRVLVLTGLQDVRFPQDEAVAPSSPFLEEDEGGKKDSWLAELAGERLMAATSCRSLHLYNISDGRGKVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQTEERVQPEYQRRRGAGGALSVSHVTHARHQESCLHTTRTSFSLPIPLSSSPGFCTAVVSLKWQLHFEFVTSREPGLVLLPPMEQSEPATWTGPEQVPVDTFSWELPIKVLPTSPTLASYAVPGPSTSTITI