Sequence details NCBI ID: XM_004870048.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101715579

Database interlinks

Part of NW_004624867.1 (Scaffold)

For more information consult the page for NW_004624867.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRSS12 ENSCPOG00000010027 (Guinea pig)

Gene Details

protease, serine, 12 (neurotrypsin, motopsin)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009000, Guinea pig)

Protein Percentage 82.6%
CDS Percentage 83.86%
Ka/Ks Ratio 0.32695 (Ka = 0.1264, Ks = 0.3865)

PRSS12 ENSG00000164099 (Human)

Gene Details

protease, serine, 12 (neurotrypsin, motopsin)

External Links

Gene Match (Ensembl Protein ID: ENSP00000296498, Human)

Protein Percentage 83.41%
CDS Percentage 85.03%
Ka/Ks Ratio 0.24906 (Ka = 0.1012, Ks = 0.4064)

Prss12 ENSMUSG00000027978 (Mouse)

Gene Details

protease, serine, 12 neurotrypsin (motopsin)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029603, Mouse)

Protein Percentage 78.7%
CDS Percentage 80.07%
Ka/Ks Ratio 0.20586 (Ka = 0.1313, Ks = 0.6377)

Prss12 ENSRNOG00000015353 (Rat)

Gene Details

protease, serine, 12 neurotrypsin (motopsin) (Prss12), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021116, Rat)

Protein Percentage 78.97%
CDS Percentage 79.89%
Ka/Ks Ratio 0.20277 (Ka = 0.1317, Ks = 0.6496)

Genome Location

Sequence Coding sequence

Length: 2610 bp    Location: 5450931..5340831   Strand: -
Raw sequence   
>XM_004870048.1
ATGACGCTCGCTCGGTTCCTGCTGGCTCTGATGTTGGGGGCGCTCCCCGAAGTGGTCAGCGTTGATCCGATCCTCGGTTATCCGCTGTGCCTCCGCCACCGCCATTCGCCCCGTGGGGGTGCCCAGTATCCCGACTACCGGACGCCTCCGTCACCCCTGTGCCCCCGGCGGGCAGTCCCTGCCCTTCGTCCGCAAGCGCTCCAGGCTGGACACTCGTCGCGGTCCCACCCTGGGGGCTGTCCCGCCGGGCAGGCCGGGGCTAACGTGACGGACCTGGGCGCCCCGTGTCTGAGCTGGTCGGAGGTGCCACCCTTCCTGGAGCGGTCGCCCCCGGCTAGCTGGGCTCAGCTGCGAGGACAGCGACACAACTTTTGCTGGAGCCTGGACGGCAAGAGCAGACCCTGGTGCTTCTATGCGAACGCCCGTGGCCAGGTGGACTGGGGCTACTGCGCCTGCAGACTCGGTGAGTGGCGGCGGGGCAGCGGCGACACCGCGGGTTGCACGGAGCCAGCTGGGCTTGGGGAGGCGTCCCTGCCTCTTGGAGAAGGAGGGAAGGGGTGGTGGGCGAGATGCGAGTTTGTCTTGTGTAGTGTGCCTGTGGCCACCACAGAGTTACCAGTAAAAGGGGAAAACATAGCAAAACAAACCCCGTTTTTTGGAGTAGGCCATATTCCTATTTATTGGAGCAATGTCTGTTGCCGAGGAGATGAAGAAAACATACTTCTTTGTGAAAAAGACATCTGGCAGGGTGGAATGTGTCCTGTGAAGATGGTAGCTGCTGTCATATGTAGCTTTTCCCATGGCCCATCGTTGACTGTCATTCGCCTCACTGGTGGCAGCAGTGTGCAGGAAGGTCGTGTGGAGCTCTACCATGCTGGCCAGTGGGGGACCATCTGCGATGACCAGTGGGATGATGCAGATGCAGAAGTGATCTGCAGGCAGCTGGGCCTCAGTGGCATTGCCAAAGCATGGAATGAGGCACATTTTGGGGAAGGATCTGGCCCCATATTGTTGGATGAAGTGCACTGCACTGGGAATGAGCTTTCGATTGAGCAGTGTCCAAAGAGTTCCTGGGGTGAGCATGACTGTGGCCACAGAGAAGATGCTGGGGTGTCCTGTACCCCCCTTACAGATGGGGCCATCAGACTTGCAGGTGGGAAAGGCAGCCACGAGGGTCACTTGGAGGTGTACTACAGGGGACAGTGGGGCACTGTCTGTGATGATGGCTGGACTGAGCTCAATACTTACGTGGTTTGTAGACAGCTGGGATTTAAGTATGGCAAACAAGCCTCTCCAAACCATTTTGAAGAAAGCCCAGGGCCCATCTGGTTGGATGATGTGAGCTGCTCAGGAGAGGAAACCAGTTTCCTTCAGTGTTCCAGGAGACAATGGGGAAAGCATGACTGCAGCCATCAGGAAGATGTGGGCATCGCCTGCTACCCTGGCAGCAATGGGCATAAACTCCCTCTGGGTTTTCCTATAAGACTTATGGATGGAGAAAATAAAAAAGAAGGACGAGTGGAGGTTTTTATCAATGGCCAGTGGGGAACAATTTGTGATGATGGATGGACTGATAAGGATGCAGCTGTGATCTGTCGACAGCTTGGTTATAAGGGTCCTGCCAAAGCAAGAACCATGGCTTATTTTGGGGAAGGGAAAGGACCCATCCACATGGACAATGTGGAGTGTACAGGAAATGAGAGGTCTTTAGCTGACTGTATAAAGCAAGATATTGGAAGTCACAACTGTCGTCACAGTGAAGACGCAGGAGTTATCTGTGATTATTTTGGCAAGAAAGCATCAGGTAACAGTAATAAAGAGTCCCTCTCATCTGTTTGTGGTTTGAGATTATTGCACCGTCGGCAGAAGCGGATCATTGGTGGGAAAAATTCTTTAAGGGGTGGTTGGCCTTGGCAGGTTTCCCTCCGGCTGAAGTCATCCCACGGAGATGGCAGGCTCCTTTGTGGGGCAACGCTCCTGAGCAGCTGCTGGGTCCTGACTGCAGCGCACTGTTTCAAGAGGTACGGTAACAGCAGTAGGAACTATGTTATCCGGGTTGGAGACTATCATACTTTGGTGCCAGAGGAGTTTGAAGAAGAGATTGGAGTTCAACAGATTGTGATTCATGGGGCATATCGCCCAGTCAGCAATGACTATGACATTGCCCTGGTTAGATTACAAGGACCAGAGGAACAATGTGCCAGATTCAGCAGCCATGTCTTGCCAGCCTGTTTACCACTCCGCAGGGAGAAGCCACAGAAGACAGCCTCCAATTGTTACATAACAGGGTGGGGAGACACAGGACGAGCATATTCAAGAACACTACAACAAGCAGCCATCCCCTTACTGCCCAAGAGATTTTGTGAAGAACGCTATAAAGGAAGGTTTACTGGGAGAATGCTCTGTGCTGGAAACCTCTGGGAACACAGTCGAATGGACAGCTGCCAGGGAGACAGTGGAGGACCACTCATGTGTGAGCGTCCCGGAGAGACCTGGGTTGTGTACGGGGTAACTTCCTGGGGGTATGGCTGTGGAGCCAAGGATTCTCCTGGTGTTTATACCAAAGTTTCAACCTTTGTACCTTGGATAAAAAGTGTCACCGAATTATAA

Related Sequences

XP_004870105.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: neurotrypsin [Heterocephalus glaber]

Length: 869 aa      View alignments
>XP_004870105.1
MTLARFLLALMLGALPEVVSVDPILGYPLCLRHRHSPRGGAQYPDYRTPPSPLCPRRAVPALRPQALQAGHSSRSHPGGCPAGQAGANVTDLGAPCLSWSEVPPFLERSPPASWAQLRGQRHNFCWSLDGKSRPWCFYANARGQVDWGYCACRLGEWRRGSGDTAGCTEPAGLGEASLPLGEGGKGWWARCEFVLCSVPVATTELPVKGENIAKQTPFFGVGHIPIYWSNVCCRGDEENILLCEKDIWQGGMCPVKMVAAVICSFSHGPSLTVIRLTGGSSVQEGRVELYHAGQWGTICDDQWDDADAEVICRQLGLSGIAKAWNEAHFGEGSGPILLDEVHCTGNELSIEQCPKSSWGEHDCGHREDAGVSCTPLTDGAIRLAGGKGSHEGHLEVYYRGQWGTVCDDGWTELNTYVVCRQLGFKYGKQASPNHFEESPGPIWLDDVSCSGEETSFLQCSRRQWGKHDCSHQEDVGIACYPGSNGHKLPLGFPIRLMDGENKKEGRVEVFINGQWGTICDDGWTDKDAAVICRQLGYKGPAKARTMAYFGEGKGPIHMDNVECTGNERSLADCIKQDIGSHNCRHSEDAGVICDYFGKKASGNSNKESLSSVCGLRLLHRRQKRIIGGKNSLRGGWPWQVSLRLKSSHGDGRLLCGATLLSSCWVLTAAHCFKRYGNSSRNYVIRVGDYHTLVPEEFEEEIGVQQIVIHGAYRPVSNDYDIALVRLQGPEEQCARFSSHVLPACLPLRREKPQKTASNCYITGWGDTGRAYSRTLQQAAIPLLPKRFCEERYKGRFTGRMLCAGNLWEHSRMDSCQGDSGGPLMCERPGETWVVYGVTSWGYGCGAKDSPGVYTKVSTFVPWIKSVTEL