Sequence details NCBI ID: XM_004870044.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Synpo2
Gene Name synaptopodin 2, transcript variant X2
Entrez Gene ID 101710088

Database interlinks

Part of NW_004624867.1 (Scaffold)

For more information consult the page for NW_004624867.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 3696 bp    Location: 5697124..5893128   Strand: +
Raw sequence   
>XM_004870044.1
ATGGGCACCGGAGATTTCATCTGCATTTCCATGACTGGAGGGGCCCCCTGGGGCTTCCGATTGCAAGGTGGCCGGGAGCAGAAGCAACCCTTACAAGTTGCAAAGATTCGAAGCCAGAGCAAAGCCTCAGGGTCTGGGCTGTGTGAGGGGGATGAGGTGGTGTCTATCAATGGCAACCTGTGTGCGGACCTCACCTACCCAGAAGTCATCAAACTCATGGAAAGCATCACAGACTCTCTCCAGATGCTCATCAAAAGACCATCCAGTGAAATAAATGAGGCTGTGGTCTCTGAAACTGAAAACAAAAACCTGGAGCATCTCACACAGGAGGGGTACGTGGAAAGTACCACCCTGCAGATTCGACCAGCTACAGAGACCCAGTACAGAGAATTCTCCATCTCCCTGGCCAAGAGCGGAGCTCCTGTAGCTGAGGACCAAAGAAGTGGTTCCGATTGTGCCTGGAGTATAAAAGAAGAAGGAGGCCCCAGCTATCAAACAGCTCCCCAAATGCTCGACTCTCTAGAGGGATCCTTGACAGAAGAGGTTGTCTCAAGAGAAAAGGCAGAAGCAGGGAGGCTGGGCACTGTGGTGGAGCTACAACTGTCACTTCCACAGGACAGACACAAGGACTCCAGCAGCCCTGCTGTGGGTCTCCTGAGAGCTAAAAAGCCAAAATCTCCTGACCCAGACCTGTGCTTGCAGCATGAGGGGGCTGTCCTCATAAATTCCATCCCTGCTGATGAGAAAGCAGACCTTTCTCTGAGGTCCAGCAAGACACTCCAGGTCTCCAGCAGCAGAGAGCCGAGAGTGATCCATGGGAGTGGAGTAGCAGCTGGGGGGCTGGCCCAGGTGGAAGTGATCCTTGATTGCTCTGACAGGCAGAAGACTGAAGGGTGCAGGCTGCAGGCAGAAAAGGGGTGTGTGGCTTCTCCAGGGGAAGGAGGGCAGTCCGAAGCACCTCCTTCTCTGGTCTCCTTTGCCGTCTCATCAGAAAGCACAGAGCAGGGGGAAGATCCACGCTGGGAAAAAGATCACAGCAGACCACACAAGCACAGAGCGCGGCACTCACGGCTCAGGAGGAGTGAAAGCCTATCAGAAAAACAAGTGAAGGAAGCAAAATCTAAATGCAAAAGCATTGCCCTTCTTCTCACTGATGCCCCCAACCCCAACTCCAAGGGGGTGTTGATGTTTAAGAAGCGCCGGCGGAGGGCCAGGAAGTACACCCTAGTCAGCTACGGTACTGGTGAGCTTGAACGAGAAGCAGACGAAGAGGAGGAGGAGGAAGGTGACAAAGAGGCTACATGTGAAGTGGCATTTCTCGGCACAAGTGAGTCAGAAGTGGATGAAGAGTTGCTGTCTGACATTGAAAACACCCAAGTAGTAAACTTTGACTGGGATTCTGGACTGGTGGACATTGAGAAGAAACTGAACAGAGAGGATAAGATGGAGATGTTGCCAGACACCACAGGAAAAGGAGCCCTCATGTTTGCCAAGAGGAGGGAGAGAATGGATCAGATCACAGCGCAGAGAGAAGAGGAGAGGGTTGCTGGAGCACCAGGCAGAGAGGTGGAGATTGCCCAGACAGATGGCCTGAAAACCGTGACTTCATACCAAAGGAAGGAAGAGGAATCGATGAGAATGCAGACCTCTGTGAGCAAAAGCTACATCCACATGGGCCATAGTCTTGGCCAGGTGCCCCAACAGAATGGCTTCAGTGGAGGATCCGAGACAGCAGAGGCCCAGAGGCCAATGCCTATGAACAGAACGGCCAAGCCCTTCCCTGGCTCTGCAAACCAGCAAGCAGCTCCCTTCTCGCCGACCCACAACGTCCCAAGTCCCATCACTGACTTCCCTGCTCCTCCACCTTATTCTGCGGTCACTCCTCCACCCGAAGCCTTCTCCAGAGGGGTATCAAGTCCCATTGCTGGCCCAGCACAGCCCCCTCCCTGGCCTCAGCCTGCTCCATGGTCCCAGCCAGCCTTTTATGATGCAACTGAGAGGATAGCGTCCCGGGATGAGAGGATTGCAGTGCCAGCAAAAAGAACAGGGATATTGCAAGAAGCCAAAAGGAGAAGCACCACAAAACCCATGTTCACATTTAAAGAGCCCAAAGTAAGCCCAAATCCTGAACTCTTGTCACTTCTTCAAAATTCAGAAGGCAAACGGGGCACTGGAGCTGGTGGCGATTCCGGACCTGAAGAAGACTACCTCAGCTTAGGAGCAGAGGCTTGTAACTTCATGCAAAGCTCCTCTGCTAAGCAAAAGACCCCACCTCCTGTTGCTCCAAAACCTGCAGTCAAGTCCTCATCCTCCCAACCAGTTACTCCGGTTTCTCCAGTCTGGTCTCCAGGAGCAGCTGCAACCCAACCTCCTGCCTTCCACACATCAAACCCATCACAGGGCACGGTGGTCTCCTCCATCAAAATAGCTCAGCCTTCTTGCCCTCCTGCCCGGCCTGCAAGTGTGCTGAACCTGTCTGGTCCCTTTAAAGGACCACAAGCAGCAGTAGCCAGTCAGAATTACATCCCCAAGCCAACAGCACCCATACCAACAGTCAGTGCTGCTCATGCTGGTGCAATGGGACCATCCAACGAGCTTCCCGGAATGAGTGGGAAAGGAGCCCAGCTCTTCGCTAAGAGGCAGTCGAGAATGGAGAAGTATGTGGTGGATTCCAACACTGTCCTGGCCCACACTGCCAGGGCTCAGTCTCCCACTCCATCCCTACCAGCCAGTTGGAAGTATTCCTCCAACATCCGAGCGCCTCCTCCTGTGGCCTACAATCCTATCCACTCTCCCTCCTACCCGCTGGCTGCCATCAAGTCTCAGTCATCAGGCCCACAGGCCTCCAAAGTGAGCAAGAAAAAGGGCAAGAAACCCCTCAATGCTTTGGATGTCATGAAGCACCAGCCATATCAGCTCAATGCATCCTTGTTTACTTTCCAGCCTCCAGATGCAAAGGATGGCCTTCCCCCAAAGTCATCAGTCAAGGTCAATTCAGCCCCTGCCATGAAGCAAGCTCTTCCTTCCAGGCCAGTGAATGCCACCTCACCCACGAAGGTACAGGCTTCGTCTGTGTACTCAGTACCGGCCTACACCTCTCAGTCTACCTTCTTTGCAGAGGCCACCTCCCCAGTCAGTGCATCCCCAGTGCCTGAGAGTGGGCACTCCCTGTCCCTTCCTGGAAAACCAGTCCCACCCATCATTTCTACAACATCTCCTTGGGTATACCAGCCTGCTTATAATTACTTCCGCAAACCAGCAGATGGGCTGGAGAAAGCAAACAGGAGACCAACACCTTGGGAAGCAGCAGCAAAGTCTCCTCTTGGCCTTGTGGATGATGCTTTCAAACCCAGAAACATCCAAGAGTCCATTGTGGCAAATGTGGTCTCAGCAGCTCGGAGGAAGGTGCTTCAGGGGCCCCCAGGACATTGGAATGAGAAACTGTCCTATGTTCCTCAAACACAGAAGGTCAATATGGACTTATTTGAAAGGCAAGAGTATCATGTTACCTCCGTAGCTAATAATAGCATGCCTACCAACTTTCAGTATGGTTCACAGTTGCCATATGCATATCATAGGCAGGCTTCTAGAAATGATTCTGAAATAATGTCCTTGGAGACCAGGTCTGATTACTGCCTCCCCATAGCTGATTGCAACTATAACCCACACCCCAGGGGATGGAGACACCAAACATGA

Related Sequences

XP_004870101.1 Protein

Synpo2 PREDICTED: synaptopodin-2 isoform X2 [Heterocephalus glaber]

Length: 1231 aa      
>XP_004870101.1
MGTGDFICISMTGGAPWGFRLQGGREQKQPLQVAKIRSQSKASGSGLCEGDEVVSINGNLCADLTYPEVIKLMESITDSLQMLIKRPSSEINEAVVSETENKNLEHLTQEGYVESTTLQIRPATETQYREFSISLAKSGAPVAEDQRSGSDCAWSIKEEGGPSYQTAPQMLDSLEGSLTEEVVSREKAEAGRLGTVVELQLSLPQDRHKDSSSPAVGLLRAKKPKSPDPDLCLQHEGAVLINSIPADEKADLSLRSSKTLQVSSSREPRVIHGSGVAAGGLAQVEVILDCSDRQKTEGCRLQAEKGCVASPGEGGQSEAPPSLVSFAVSSESTEQGEDPRWEKDHSRPHKHRARHSRLRRSESLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELEREADEEEEEEGDKEATCEVAFLGTSESEVDEELLSDIENTQVVNFDWDSGLVDIEKKLNREDKMEMLPDTTGKGALMFAKRRERMDQITAQREEERVAGAPGREVEIAQTDGLKTVTSYQRKEEESMRMQTSVSKSYIHMGHSLGQVPQQNGFSGGSETAEAQRPMPMNRTAKPFPGSANQQAAPFSPTHNVPSPITDFPAPPPYSAVTPPPEAFSRGVSSPIAGPAQPPPWPQPAPWSQPAFYDATERIASRDERIAVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGKRGTGAGGDSGPEEDYLSLGAEACNFMQSSSAKQKTPPPVAPKPAVKSSSSQPVTPVSPVWSPGAAATQPPAFHTSNPSQGTVVSSIKIAQPSCPPARPASVLNLSGPFKGPQAAVASQNYIPKPTAPIPTVSAAHAGAMGPSNELPGMSGKGAQLFAKRQSRMEKYVVDSNTVLAHTARAQSPTPSLPASWKYSSNIRAPPPVAYNPIHSPSYPLAAIKSQSSGPQASKVSKKKGKKPLNALDVMKHQPYQLNASLFTFQPPDAKDGLPPKSSVKVNSAPAMKQALPSRPVNATSPTKVQASSVYSVPAYTSQSTFFAEATSPVSASPVPESGHSLSLPGKPVPPIISTTSPWVYQPAYNYFRKPADGLEKANRRPTPWEAAAKSPLGLVDDAFKPRNIQESIVANVVSAARRKVLQGPPGHWNEKLSYVPQTQKVNMDLFERQEYHVTSVANNSMPTNFQYGSQLPYAYHRQASRNDSEIMSLETRSDYCLPIADCNYNPHPRGWRHQT