Sequence details NCBI ID: XM_004870038.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ndst3
Gene Name N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
Entrez Gene ID 101708542

Database interlinks

Part of NW_004624867.1 (Scaffold)

For more information consult the page for NW_004624867.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NDST3 ENSCPOG00000003838 (Guinea pig)

Gene Details

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003464, Guinea pig)

Protein Percentage 98.05%
CDS Percentage 95.23%
Ka/Ks Ratio 0.05553 (Ka = 0.0093, Ks = 0.1673)

NDST3 ENSG00000164100 (Human)

Gene Details

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000296499, Human)

Protein Percentage 97.14%
CDS Percentage 93.32%
Ka/Ks Ratio 0.05476 (Ka = 0.0137, Ks = 0.2503)

Ndst3 ENSMUSG00000027977 (Mouse)

Gene Details

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000118207, Mouse)

Protein Percentage 93.7%
CDS Percentage 89.16%
Ka/Ks Ratio 0.07601 (Ka = 0.0324, Ks = 0.4261)

Ndst3 ENSRNOG00000015781 (Rat)

Gene Details

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 (Ndst3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021335, Rat)

Protein Percentage 93.24%
CDS Percentage 88.58%
Ka/Ks Ratio 0.07304 (Ka = 0.0339, Ks = 0.4636)

Genome Location

Sequence Coding sequence

Length: 2622 bp    Location: 5142479..5314516   Strand: +
Raw sequence   
>XM_004870038.1
ATGAGTTTTATCATGAAGCTTCACAGACACTTTCAAAGGACTGTCATTCTGCTTGCCACTTTTTGTATGGTGAGCATTATTATTTCTGCTTACTATCTGTACAGTGGCTACAAACAGGAAAATGAACTCTCTGAGATGGCTTTAGAAGTAGACTGTAGTGACCTGCAACACCTACCATATCGGCTAATGGAAGTGAAGACAACAAAGCTCTTTGATGCCTCAAGGACAGATCCCATAGTCCTGGTGTTTGTAGAAAGCCAGTACTCATCCCTTGGTCAAGACATAATTATGATTCTAGAATCAAGCAGATTCCAATATCACATTGAAATTGCTCCTGGAAAAGGAGATCTCCCAGCACTTATAGACAAAACTAAAGGCAAATACATTCTCATCATTTATGAGAATATTTTAAAGTATATTAATATGGACTCTTGGAATCGAAGCCTTCTAGATAAATACTGTTTGGAATATGGTGTGGGTGTTATTGGATTCCACAAAACTAGTGAGAAGAGTCTACAGAGCTTTCAGTTAAAAGGTTTCCCTTTTTCCATATATGGAAACCTTGCAGTAAAAGATTGTTGTATTAATCCTCACTCTCCATTGCTTCATGTGACCAAGTCTTCTAAGCTCGAAAAAGGCTCTTTACCTGGAACCGACTGGACAGTTTTTCAGATTAATCACTCAGCTTACCAACCAGTAATATCTGCCAAAGTAAAGACCCCAGAAAACTTTTCTCCTCCCATCTCTAAAGGTGCTTTTTATGCCACTATCATACATGACTTGGGGCTTCATGATGGAATTCAGAGAGTTCTCTTTGGCAACAACTTAAACTTTTGGCTACATAAGCTCATCTTTGTAGATGCCATCTCCTTCTTGTCAGGGAAGAGACTGACATTGTCCTTGGACAGGTATATTCTCGTGGACATTGATGATATATTTGTGGGGAAGGAGAGAACAAGGATGAACACCAACGATGTTAAGGCCCTGCTTGATACTCAGAATCTTTTACGTGCACAAATCACAAATTTTACATTCAACCTGGGATTTTCAGGGAAATTTTACCATACAGGAACTGAAGAGGAAGATGAAGGGGATGACTGTCTGTTGGGATCTGTGGATGAGTTCTGGTGGTTTCCTCACATGTGGAGTCATATGCAGCCCCACCTCTTTCATAATGAGTCATCTTTGGTGGAGCAGATGATTCTCAACAAAAAATTTGCCTTAGAGCATGGCATTCCTACTGACATGGGCTATGCAGTAGCCCCACATCATTCAGGTGTCTATCCTGTACATGTTCAGCTTTACGAGGCTTGGAAGAAAGTTTGGAATATTAAAATCACCAGCACTGAAGAATATCCACATCTGAAACCAGCTAGATATCGGAGAGGATTCATCCACAAAAACATCATGGTTCTTCCAAGACAGACCTGTGGGCTTTTCACTCACACAATTTTCTACAAAGAATATCCAGGAGGCCCTAAAGAGCTGGACAAAAGTATTCAAGGAGGTGAACTTTTCTTCACTGTTGTACTCAACCCAATCAGTATTTTCATGACTCATTTGTCCAACTATGGGAATGACCGACTGGGATTATATACATTTGTTAATCTGGCCAACTTTGTACAGACCTGGACCAACCTGCGTCTTCAGACTCTGCCTCCAGTGCAACTAGCTCACAAGTATTTTGAGCTGTTTCCTGATCAGAAAGACCCTCTCTGGCAGAATCCATGCGATGACAAACGCCACAGAGACATTTGGTCTAAAGAAAAAACCTGTGATCGCTTACCAAAATTCTTGGTAATAGGACCCCAGAAAACTGGTACCACTGCTTTGTATTTGTTCCTGGTTATGCATCCTTCCATCCTTAGTAACTCCCCCAGCCCAAAAACCTTTGAGGAGGTACAGTTCTTTAATAGAAATAACTACCACAGGGGGATTGATTGGTACATGGATTTCTTTCCAGTTCCATCGAATGTCACCACTGACTTTCTGTTTGAGAAGAGTGCAAATTACTTCCACTCTGAGGAAGCTCCTAAAAGAGCTGCTTCCCTTGTCCCCAAAGCCAAGATCATCACCATTCTCATTGACCCGTCAGACCGAGCATATTCCTGGTATCAGCATCAGCGATCACATGAAGACCCTGCAGCTCTAAAGTTCAGCTTCTATGAAGTCATCTCTGCCAGGCCCCATGCACCCTCGGAACTCAGAACCTTGCAGAAGAGATGTTTGGTTCCTGGGTGGTATGCCAGTCACATCGAGAGATGGCTTGTTTATTTCCCCCCCTTTCAGTTGCTAATTATCGATGGGCAGCAGCTAAGAACTGATCCAGCTACAGTGATGGATGAAGTTCAGAAGTTTCTAGGAGTCTCTCCTCACTATAATTACTCAGAAGCGTTAACATTTGATTCTCATAAAGGCTTCTGGTGTCAGTTACTGGAAGAAGGTAAAACAAAATGCCTTGGAAAGAGTAAAGGAAGAAAATACCCTCCAATGGATTCTGATAGCAGAGCATTTCTGTCAAGCTACTACAGAGATCACAACGTGGAACTCTCAAAGCTGCTTCACAAACTGGGGCAGCCTCTGCCATCCTGGCTGAGACAGGAGCTGCAGAAAGTGAGATAG

Related Sequences

XP_004870095.1 Protein

Ndst3 PREDICTED: bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3 [Heterocephalus glaber]

Length: 873 aa      View alignments
>XP_004870095.1
MSFIMKLHRHFQRTVILLATFCMVSIIISAYYLYSGYKQENELSEMALEVDCSDLQHLPYRLMEVKTTKLFDASRTDPIVLVFVESQYSSLGQDIIMILESSRFQYHIEIAPGKGDLPALIDKTKGKYILIIYENILKYINMDSWNRSLLDKYCLEYGVGVIGFHKTSEKSLQSFQLKGFPFSIYGNLAVKDCCINPHSPLLHVTKSSKLEKGSLPGTDWTVFQINHSAYQPVISAKVKTPENFSPPISKGAFYATIIHDLGLHDGIQRVLFGNNLNFWLHKLIFVDAISFLSGKRLTLSLDRYILVDIDDIFVGKERTRMNTNDVKALLDTQNLLRAQITNFTFNLGFSGKFYHTGTEEEDEGDDCLLGSVDEFWWFPHMWSHMQPHLFHNESSLVEQMILNKKFALEHGIPTDMGYAVAPHHSGVYPVHVQLYEAWKKVWNIKITSTEEYPHLKPARYRRGFIHKNIMVLPRQTCGLFTHTIFYKEYPGGPKELDKSIQGGELFFTVVLNPISIFMTHLSNYGNDRLGLYTFVNLANFVQTWTNLRLQTLPPVQLAHKYFELFPDQKDPLWQNPCDDKRHRDIWSKEKTCDRLPKFLVIGPQKTGTTALYLFLVMHPSILSNSPSPKTFEEVQFFNRNNYHRGIDWYMDFFPVPSNVTTDFLFEKSANYFHSEEAPKRAASLVPKAKIITILIDPSDRAYSWYQHQRSHEDPAALKFSFYEVISARPHAPSELRTLQKRCLVPGWYASHIERWLVYFPPFQLLIIDGQQLRTDPATVMDEVQKFLGVSPHYNYSEALTFDSHKGFWCQLLEEGKTKCLGKSKGRKYPPMDSDSRAFLSSYYRDHNVELSKLLHKLGQPLPSWLRQELQKVR