Details from NCBI annotation

Gene Symbol Rif1
Gene Name RAP1 interacting factor homolog (yeast)
Entrez Gene ID 101726637

Database interlinks

Part of NW_004624866.1 (Scaffold)

For more information consult the page for NW_004624866.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RIF1 ENSG00000080345 (Human)

Gene Details

RAP1 interacting factor homolog (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSP00000243326, Human)

Protein Percentage 77.72%
CDS Percentage 85.12%
Ka/Ks Ratio 0.33067 (Ka = 0.1259, Ks = 0.3807)

Rif1 ENSMUSG00000036202 (Mouse)

Gene Details

Rap1 interacting factor 1 homolog (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000108313, Mouse)

Protein Percentage 70.6%
CDS Percentage 78.36%
Ka/Ks Ratio 0.31089 (Ka = 0.1934, Ks = 0.6221)

Rif1 ENSRNOG00000006267 (Rat)

Gene Details

Rap1 interacting factor 1 homolog (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008201, Rat)

Protein Percentage 67.92%
CDS Percentage 75.97%
Ka/Ks Ratio 0.31459 (Ka = 0.2228, Ks = 0.7084)

Genome Location

Sequence Coding sequence

Length: 7359 bp    Location: 5680105..5625824   Strand: -
>XM_004870030.1
ATGTCGGCTCCAGGTGAGAATCCCCTCCTGCCACTGTTGGAGACTTTGGAAGACTCGTCCGCCTCCCCTGGAGAGCAGACCGACGCTTACTTATCCCTGACCAGTCGTATGACTGGAGAAGAAGGAAAAGAAGTCATTGTAGAAATTGAGAAAAATCTTCCTCAGCTGTACAAAGTTTTAAAGATTCACATTTCCAGTCAAAACTCAGAGCTGAGTAGTGCTGCTCTTCAGGCCTTGGGCTTTTGCTTGTATAATCCCAAAATTACTTCAGGATTATCAGAAGCAGATATTCAAGAACTGCTTTCAGAATTGAATGATATTGTTAAAAGTTCAGACAAAAATGTACGTACCAGGGCTCTTTGGGTAATATCCAAACAGACGTTTCCCACTGAAGTTGTTGGCAAAATGGTATCCAGTATAATTGATTCATTAGAAATAGTATTTAATAAAGGAGAGATACATTCTGCAGTTGTTGATTTTGAAGCATTAAATGTTATCATAAGGCTAATTGAACAAGCCCCAATTCAGATGGGAGAAGAGTCAGTAAGGTGGGCAAAACTAGTCATACCTTTGGTGGTTCATTCAGCACAGAAAGTACATTTACGGGGAGCCACAGCTCTAGAGATGGGAATGCCATTGTTGCTTCAGAAACAACAAGAAATAGCATCTATTACAGAGCACCTTATGACTACCAAATTAATCCCAGAACTCCAAAAGCTATTTATGAGTAAAAATGAGACGTATGTTTTAAAATTGTGGCCCTTGTTCGTTAGACTTCTTGGAAAGACCTTGCATCGAAGTGGGACTTTCATCAATTCTTTGCTACAGCTGGAAGAATTAGGATTTCGCAGTGGAGCACCCATGATTAAAAAAATAGCTTTTATTGCTTGGAAGAGCTTAATAGATAATTTTGCTTTAAATCCAGATATACTATGTAGTGCAAAAAGACTGAAGTTGTTAATGCAGCCTTTGAGTTCCATCCACGTGAGAACAGAAACCCTAGCATTAACGAAGTTAGAAGTCTGGTGGTATTTACTAATGAGACTCGGACCTCATCTCCCTGCTAATTTTGAACAGGTTTGTGTGCCTCTGATTCAGAGCGCAATAAGTGATTCTAGCACTTCGCCTCAAGGAAATTCATCTCGTATAGCTTCTTCTCCAGGATTAAATCCTATGACTCCTGTACACAAAGGTCCTTCCCTATATGGAGGTCCTGTAACTCCACGAATACACATAAGTACAAATTCAAGTGGAATGGCAACAATCCCTTCCATTCAACTTTTGGGACTTGAAATGCTGCTTCATTTTTTGCTGGGTCCAGAAGTCTTGAGTTTTGCTAAGCAACACAAACTTGTATTGAGCTTAGAACCACTTGAACATCCATTAATCAGCAGCCCTTCTTTTTTTTCCAAACATGCACATACACTTATCACTGCTGTTCATGACAGCTTTGTTGCAGTTGGGAGAGATGCTTCTGATGCAGTTGTCAGTGCTATCTGGAAGGAGCTAATTAGCTTAGTGAATTCACTTACTGAATCTGGTAACAAAAAAGAGAGACCAGGTTCTGAAGTATTGACCCTCCTACTGAAATCTTTGGAAAGCATAATGAAGTCTGAAGTACTTCCTGTATCGAAAACGCTGGTCCTCATGGAAATTACAATTAAAGGACTTCCTCAGAAAGTATTAGGTTCACCAGCATATCAGGTTGCTAATATGGATATTCTTAATGGAACTCCAGCTTTGTTCTTAATTCAGTTAATTTTCAGCAGTTATCTCCAGGAATGTGGTATAGCAGATGAAAGGTTTTTTCTAAATCTGGAAACACTTGTAGGCTGTGTGCTTTCTGGTCCAACTTCACCACTAGCTTTTAGTGACTCTGTTTTAAATGTAATTAATCAAAATGCAAAGCAAGTGGAAAATAAGGAACATCTCTGGAGAATGTGGAGCATTATAGTCACACCTTTAACTGAATTCATTAATCAGACCAATGAAGTAAATCAAGGTGATGCCTTAGAACATAATTTTAGTGCCATCTATAGTGCATTGGCTTTACCAATACATCATATTTTTGCAGTACAGAGATTGCCTGTGGTGACGATGAAGGCTTTACTTCAAACTTGGTCAGAATTATATAGAGTATTTGCTCGCTGTGCTGCTTTGGTGGCAACAGCAGAAGAGAATTTGTGTTGTGAAGAACTTTCTTCTAAGATAATGTCCATTTTGGATGATGAAGCCTTTTTGAATTTGTGGTTCTTGGACAGGATCATTCATATTATTACTGTAATAGTGGATTGCATTGACTTTTCACCATATAATACTAAATATCAGCGCAAAGTTAAATCACCACAGAGATCTTCAGATTGGGCCAAAAAGAAGAAAGACCCCCTAGGAAAATTGGCCTCTTTAGTTAAACTTATTGTAAGAGTCATCTGTTCTTTCCACACTTTGAGCTTCAAGGAAGCACATTCTGATGCGCTACTTGGTGTCGGCAACTCAATCATTAGCATGATTTCCAATCTACTTGGACATATTTCTTTGCCTTCTGTGATTCGAAAAATATTTGCAGTATTAACAAGACCCTTGGCATTGTTTTATGAAAACTCCAAGCTTGATGAAGTTCCTAAAGTGTATAGTTCTCTGAACAACAAGTTAGAAAAGCTACTAGGAGAAATTATTACTTGTCTACAGTCCTGCGCTGGCACTTATGACAGTGAACTTCTTGAACAGCTCTCCCCACTGTTATGCATAATATTTCTGCACAAGAATAAACAGATTCGAAAGCAGAGTGCTCAGTTCTGGAATGCTACATTTGCTAAAGTGATGACGTTGAACTATCCTGAAGAGTTAAAACCAGTACTAAGAGAAGCCAAACAAAAAGTTTTACTTCTGTTGCCTGGTTTGGAAAATGTTGAAATAATAGAGGAATCCAGTGGATCATATTCAGATGCAACAGAAAATTCACAATTAAACATGAAGATAAGTGGTGTGGAAAGAAAATCAAATGGAAAAAGGGATTCTTTTTTGGCACAAACAAAGGAAAAACAAGAAAATATGAAGCCATCTGCCAAACTGAAACGAGAATCTTCATCTCCAAAAGTAAAGAGGGAAATGCTTTTGGAAGAAGAAAAGTCTACTGATTTTGTGTTTATACCTCCAGAAGGAAAAGAATTAAAGGAAAGAATACTAACTGAACACCAAAAAGAAGTACTCAAGACAAAGCGGTGTGATATTCCTGCCATGTATAATAATCTGGATGTTTCACAAGATACCTTATTTTCTGATCACTATAGTCAAGAAGAGTCTGTGCAAACTCCTACTTTAACTGAAAAACCAAAGGAAGATACCAAGATGGTGATTAAGGAGGAACAAATGAAGAGTGATACTGTTATTCAAGATGCCTTGGAAAACTGTGGTATGGATGAACATATCGAAAAGCCTTCTTTTTCAAATAATGAGTGTGGTTTTGTTCCCAAAACCAATCCAGAAATACTGAGCAGTAATAACAAAGCCAGAAAAAACACTTTAATTTCATCAAAGAAAACTTCAACTGAATGTACATCTAGTGCAGAAAATTCATTACCCAGCAGTCGATCAGTTTCTGATGCCAGTATTTCTGGAACTCACCCACAGCCTACAAGTCGGAGGCAAAGCTTTATTACCTTGGAGAAGTTTGATGGTTCAGATAATAGACCTTTCAGCCCATCCTCCTTGGGTAATATGTCTTCAGATATTTCAGTGCAAAATAACTGTGAAAATGTGACTACAACAGATAGTACACCAAAAACAAAGAAGAGAGAAGTGATGCATTCAAAATCTGATTCTGAAAAAATACTGAATGGAGTTAAGCGATCAAGCAGAAGATTGAGTAAAGCTGAGAGGGCAGCAAATAAAAGATCAAAACCCTTGATAAAATCTGAACAGGAGGAAAATAATCAAGAACCTGTTGAAGGGACAATAGCTTTAGAAAATATTAACTCACCTGATTTGCATAATCAAACAGAATGTTTGTCAGATGGTCAGGTTCATTTTTCTGAATCTGTTGGGGAGCATGAAGATAAGCCTAAACCAACAGTAGAAAATGCTGTGTTATTGGAAACCAGTACTGTCCAAGAGAAAAACATGGGGGTTAATTTAGAATCCAAAGAAAATACACCTCCAGCAGTGACTCCAGCAGATGAAGTGGTTAATGAAGAAAGTCAAGTTCAGGTAACTCCAAATCAAAAAACCCTGAGACGGTCTTCAAGGCGACGTTCAGAAATAACAGACTGTATTGGTGATAACCAAGATAAAGAAAATAGTCATCAAAAAAGGGAAAGACGTAAGGAAGAGGAAAAACCTCAGAGTTTATTGCATGTGTCACCTAAGCAGAAACTGACTTCTGAACAAACAGAACAGGACAAATTACTTGAGAAAGAAAATAATTTACATGAGAAGGCTTCTGGTGAAACCAGTGCTAATGCTGACATTGACCAAAATAAAAGAAAACCAGACCTTGAAAATGTTAATTCTGAGGGTGATAGTGCCCTGGACATTGTAGATAAGTCCTCTGAGAAACCTTTAAGAGGCCGAACACGTTATCAAACAAGAAGAGCATCTCAGGGTTTACTTTCCAGCATTGAAAATTCAGAATCTGATAGTTCTGAGGCAAAAGAAGAAGGTTCTAGGAAGAAGAGATCTGGAAAATTGAAAAACAAAAACAATGACAGTGTTAATATTGAAGAACAAGAAAAAATGGTAGAAAAGGAATCTCTAAATGTAGAGAATCACACACAGGATCATAAAGCAACTTCTGAAGTAGATGTAGACAAAAAGCCTCCGGTTTGTGAAAAAGATGCAAGTAGTCCTGAAATACTTCAGGATTCTACAGCAGCTACAGATACTTTACAAGTTTCTGATGTTGTGCCAAATACATATGAGGGAAACGCTAAGACTAGCAAATGTGCAGAGTATACCTTTGCAAGTTCACCTATGCCAGAATCAAATTTAAGGACTAGAAATGCAAGTAAGAGATTGCTTAAGCGAGATTCTGGTAACAGTGTGGGAGAATGTTCCAAAACTAGGACATCAGAAATTTCTGTGCTTTCTGAAAAAAATGTGCAGACATTTGAATGCCAGCATAAGAGAAGTCGGAGGGTGAGGCGATCTAAAGGTTGTGACTGCTGTGGGGAAAAATCTCAACTTCAGGAAAAGTCATCCATTGGGTTAAAGAACACAGAAAATTTTGACATAAAGAGTAACGAAACAAAAAAGACAGATGTGCAAACACCTGACACAGTATTAGAAACAGATTCTAAAGCTAATTTGTGTTCTGAAGCAAAATTTTTAGATGAATGTGGAAGTGTGAATTTTAATTTGGTTCTTAAGGGGAATGATACTATTAATGACTTTGTACCTGAAATAGAGTCAAAAGAAAATACTATTCAAAAATCTTCTGAAATAGTAAATTTGAAAGAAAAAGCTTGTGATGTGGATTCTGGTGAAGTGTCTCTTGAAAGTGAAGAGCCAACAAATAAGAAATTTAAAGCAGTGGGCCCATGTTTAGGTGATTGTAAGGACATTTCAGAAGAATATCATTTGGACACCAAGGAAGAAAAGCCAGAAACAACCCTCAAAAAAGAACTTACTGTTGTTAATATTGAAGGAAATGCATGTCAAGTGATAGGAGAATCCAATCTAGAGGGAGTAAAAGCTATGGAATTAGATGTAGAAAACAATAAATCTGAAGCTAGTGTTTCTGAAAAAGAGTATGTCGAAACTGATACTTCTAAAGTGGCAACAGAGGAATGTAAGAGTAGTGATGACCCTAACACAGAAACAGCTGACAAAGTAGATGTTGAAGCAGCAGCTGAGGAATTTTATTCAGGTGTTAGTCTTTGTGATAACACCACACTTATAAATGTGAATACTCAGACTCAGATTTCTGAACAAATAGGCAGGGAGGCAGGTGACAGAAGTAATGAGTCAGATTTAGGCACATCTGAAGAAATGAATGCTAAAATGGAAAACTATGAAGAAACGCTGATTGGTCACATGAATAATGAAATTGCCAGTGTCAAAGAATCAGAGGATGAGGACATGACTCCTAAAACTAAGTCAGAAGAAACCAAAACAGAACAGTTGAGTGCAGAACTTGACAGTTTTGTTCTTGACAAACTTGAAATGACTAACAAGGAAGAAAAGGTTGACTCTAATAAAACTGAAACAAATACTGAATTTAGTAAGTCTGAAGAAGCAAATTTAGATGACAATCAAATGGTAGTGGGAAATGACATTTTACTGGAAGTTAATCATACTCCACATAAAGTGGAGGAACCATCACAGTCTTTGACATCTGAAACAACTATCTCTGAGCTAGTAACAGAGGACAATAATTCATCTCCTGAAAAATTACGAGAACTTGATTCTTTATTCATGTCAGCAAGTGATAGTCCTAGTGGCATACAGACACGCTGTGTCTGGTCTCCTTTGGCTTCTCCATCTACCAGCATTTTAAAGAGAGGACTAAAACGACTCCAAGAAGATGAGATCTCATCACCTGTTAACAAGGTTCGTCGTGTCTCATTTGCAGATCCAATATACCAAGCAGGATTGGCAGATGACATTGATAGGCGATGTTCTCTTGTGAGGTCTCATTCTTCAAATAGTTCTCCTGTAATTAAAAGTGTTAAAACTTCACCTACTACACAAACTAAGCATAATACCACTTCAGCCAAAGGATTTCTGTCCCCAGGATCACGTAACTGTAAATTTAAGAGCTCAAAGAAGTGTTTAATTACAGAAATGACCAAAGAATCCATGCCATGCCCCACAGAAAGTGTTTACCCAGCTTTGATGAATTGTGCAGCGCCAGTCGACATCATTTTACCTCAGATTACATCCAACATGTGGGCAAGAGGTCTAGGACAACTTATCAGAGCCAAGAATATAAAAACTATTGGGGATTTGAGTACTCTTACAGCATCAGAAATAAAAACTCTTCCTATTCGTTCTCCAAAAGTGTCTAATGTAAAAAAGGCTCTCAGAATATATCATGAACAGCAGATGAAGTCTCATGGACTTGAAGAAATTCCAGTTTTTGATATTTCTGAGAAAACACTAAATGGAATGGAAAATAAATCAGCTGATGAAGAAAGGCTTGTCTCAGATTTGATTAATCCTGTTGCTTTAGAAACTCCATTATCTAAAAATCTTTTGGCACAAATTAGTGCTCTTGCTCTTCAGTTGGATTCAGAAGATCTTCATAATTATTCAGGAAGCCAGCTATTTGAAATGCATGAGAAACTTGGTACTATGGCAAACTCTATAATAAAAAATCTACAGTCACGTTGGAGATCACCAGCCCATGAAAATACTAGTTAG

Related Sequences

XP_004870087.1 Protein

Rif1 PREDICTED: telomere-associated protein RIF1 [Heterocephalus glaber]

Length: 2452 aa     
>XP_004870087.1
MSAPGENPLLPLLETLEDSSASPGEQTDAYLSLTSRMTGEEGKEVIVEIEKNLPQLYKVLKIHISSQNSELSSAALQALGFCLYNPKITSGLSEADIQELLSELNDIVKSSDKNVRTRALWVISKQTFPTEVVGKMVSSIIDSLEIVFNKGEIHSAVVDFEALNVIIRLIEQAPIQMGEESVRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEHLMTTKLIPELQKLFMSKNETYVLKLWPLFVRLLGKTLHRSGTFINSLLQLEELGFRSGAPMIKKIAFIAWKSLIDNFALNPDILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQVCVPLIQSAISDSSTSPQGNSSRIASSPGLNPMTPVHKGPSLYGGPVTPRIHISTNSSGMATIPSIQLLGLEMLLHFLLGPEVLSFAKQHKLVLSLEPLEHPLISSPSFFSKHAHTLITAVHDSFVAVGRDASDAVVSAIWKELISLVNSLTESGNKKERPGSEVLTLLLKSLESIMKSEVLPVSKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFSSYLQECGIADERFFLNLETLVGCVLSGPTSPLAFSDSVLNVINQNAKQVENKEHLWRMWSIIVTPLTEFINQTNEVNQGDALEHNFSAIYSALALPIHHIFAVQRLPVVTMKALLQTWSELYRVFARCAALVATAEENLCCEELSSKIMSILDDEAFLNLWFLDRIIHIITVIVDCIDFSPYNTKYQRKVKSPQRSSDWAKKKKDPLGKLASLVKLIVRVICSFHTLSFKEAHSDALLGVGNSIISMISNLLGHISLPSVIRKIFAVLTRPLALFYENSKLDEVPKVYSSLNNKLEKLLGEIITCLQSCAGTYDSELLEQLSPLLCIIFLHKNKQIRKQSAQFWNATFAKVMTLNYPEELKPVLREAKQKVLLLLPGLENVEIIEESSGSYSDATENSQLNMKISGVERKSNGKRDSFLAQTKEKQENMKPSAKLKRESSSPKVKREMLLEEEKSTDFVFIPPEGKELKERILTEHQKEVLKTKRCDIPAMYNNLDVSQDTLFSDHYSQEESVQTPTLTEKPKEDTKMVIKEEQMKSDTVIQDALENCGMDEHIEKPSFSNNECGFVPKTNPEILSSNNKARKNTLISSKKTSTECTSSAENSLPSSRSVSDASISGTHPQPTSRRQSFITLEKFDGSDNRPFSPSSLGNMSSDISVQNNCENVTTTDSTPKTKKREVMHSKSDSEKILNGVKRSSRRLSKAERAANKRSKPLIKSEQEENNQEPVEGTIALENINSPDLHNQTECLSDGQVHFSESVGEHEDKPKPTVENAVLLETSTVQEKNMGVNLESKENTPPAVTPADEVVNEESQVQVTPNQKTLRRSSRRRSEITDCIGDNQDKENSHQKRERRKEEEKPQSLLHVSPKQKLTSEQTEQDKLLEKENNLHEKASGETSANADIDQNKRKPDLENVNSEGDSALDIVDKSSEKPLRGRTRYQTRRASQGLLSSIENSESDSSEAKEEGSRKKRSGKLKNKNNDSVNIEEQEKMVEKESLNVENHTQDHKATSEVDVDKKPPVCEKDASSPEILQDSTAATDTLQVSDVVPNTYEGNAKTSKCAEYTFASSPMPESNLRTRNASKRLLKRDSGNSVGECSKTRTSEISVLSEKNVQTFECQHKRSRRVRRSKGCDCCGEKSQLQEKSSIGLKNTENFDIKSNETKKTDVQTPDTVLETDSKANLCSEAKFLDECGSVNFNLVLKGNDTINDFVPEIESKENTIQKSSEIVNLKEKACDVDSGEVSLESEEPTNKKFKAVGPCLGDCKDISEEYHLDTKEEKPETTLKKELTVVNIEGNACQVIGESNLEGVKAMELDVENNKSEASVSEKEYVETDTSKVATEECKSSDDPNTETADKVDVEAAAEEFYSGVSLCDNTTLINVNTQTQISEQIGREAGDRSNESDLGTSEEMNAKMENYEETLIGHMNNEIASVKESEDEDMTPKTKSEETKTEQLSAELDSFVLDKLEMTNKEEKVDSNKTETNTEFSKSEEANLDDNQMVVGNDILLEVNHTPHKVEEPSQSLTSETTISELVTEDNNSSPEKLRELDSLFMSASDSPSGIQTRCVWSPLASPSTSILKRGLKRLQEDEISSPVNKVRRVSFADPIYQAGLADDIDRRCSLVRSHSSNSSPVIKSVKTSPTTQTKHNTTSAKGFLSPGSRNCKFKSSKKCLITEMTKESMPCPTESVYPALMNCAAPVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASEIKTLPIRSPKVSNVKKALRIYHEQQMKSHGLEEIPVFDISEKTLNGMENKSADEERLVSDLINPVALETPLSKNLLAQISALALQLDSEDLHNYSGSQLFEMHEKLGTMANSIIKNLQSRWRSPAHENTS