Details from NCBI annotation

Gene Symbol Atp6v1c2
Gene Name ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2, transcript variant X5
Entrez Gene ID 101726403

Database interlinks

Part of NW_004624865.1 (Scaffold)

For more information consult the page for NW_004624865.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATP6V1C2 ENSCPOG00000008738 (Guinea pig)

Gene Details

ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007844, Guinea pig)

Protein Percentage 88.76%
CDS Percentage 87.9%
Ka/Ks Ratio 0.09893 (Ka = 0.0533, Ks = 0.5387)

ATP6V1C2 ENSG00000143882 (Human)

Gene Details

ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2

External Links

Gene Match (Ensembl Protein ID: ENSP00000272238, Human)

Protein Percentage 88.06%
CDS Percentage 83.45%
Ka/Ks Ratio 0.07569 (Ka = 0.0661, Ks = 0.8728)

Atp6v1c2 ENSMUSG00000020566 (Mouse)

Gene Details

ATPase, H+ transporting, lysosomal V1 subunit C2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020884, Mouse)

Protein Percentage 88.99%
CDS Percentage 84.39%
Ka/Ks Ratio 0.06703 (Ka = 0.0561, Ks = 0.8362)

Atp6v1c2 ENSRNOG00000050553 (Rat)

Gene Details

ATPase, H+ transporting, lysosomal V1 subunit C2

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066981, Rat)

Protein Percentage 90.24%
CDS Percentage 84.62%
Ka/Ks Ratio 0.05774 (Ka = 0.0518, Ks = 0.8979)

Genome Location

Sequence Coding sequence

Length: 1284 bp    Location: 4734349..4711104   Strand: -
>XM_004869954.1
ATGTCTGAATTTTGGCTAATTTCGGCCCCTGGAGATAAGGAAAATTTACAAGCACTGGAAAGGATGAACACGGTCACCTCCAAATCCAACCTGTCCCACAACACGAAGTTCTCAATTCCCGACTTCAAGGTGGGGACCTTGGATTCACTGGTCGGTCTCTCCGATGAGCTGGGGAAACTCGATACCTTTGCTGAAAGCCTCATAAAGCGAATGGCACAAACCGTGGCAGACGTCATGGAGGACTCCGAGGGCAAGGTGCAGGAGAACCTTCTGGCTAATGGAGATAACCTGACGTCCTTCGTGAGCCACTTCGAATGGGACATGGCCAAGTACCCCACCAAGCAGACGCTGGTCAGTGTGGTGGACACAGTGGCAAAGCAACTTGCGCAGATTGAAGCAGATCTGAAATCACGAACAGCCACCTATAGTGCACTGAAGACGGCGCTGGAGAACCTGGAGAAGAGGTCCACGGGGAACCTCTTCACACGGACACTGAGTGACATCGTGAGCAAGGAGGACTTCGTGCTGGATTCCGAATACCTGGTCACCCTCCTGGTCATTGTCCCCAAGGCCAGCTACGCACAGTGGCAGAAGACTTACGAATCCCTCTCGGACATGGTGGTACCTCGGTCGACCAAATTGATTGCAGAGGACCCCGAGGGCGGCCTCTTCACCGTGACGCTGTTCCGGAGAGTGATGGATGATTTCAAAACCAAAGCCAAAGAGAACAAGTTCATGGTTCGTGAGTTTTACTATGATGAGAAAGAAATTAAGAAAGAGAGGGAAGAGATGACCAGGTTGCTGTCGGACAAGAAGCAGCAGTATCAAAATTCCTGTGTTACTCTTAAAAAGGGATCATCCATCTCCCGGGACCACAAGGTTAAGGGAGCCCCACTAGGGAGCCCCACTAGGCTCGCTGCGGGGCAGCCCGACAGAGAGAGAGAGAGTGAGGGCGAGGGTGAGGGTCCACTGCTGCGCTGGCTCAAGGTGAACTTCAGTGAGGCCTTCACCGCCTGGATCCATATCAAGGCCCTCAGGGTGTTCGTGGAGTCCGTGCTCAGGTACGGGCTGCCAGTGAACTTCCAGGCTGTGCTCCTGCAGCCGCACAAGAAGTCGGCCACCAAACGCTTGAGGGAGGTGCTGAACTCGGTCTTCCGGCATCTGGACGAGGTGGCGGCTGCGAGTGTCCTGGATGCGTCGGTGGAGATCCCGGGGCTGCAGCTCGGCAGCCAGGACTACTTCCCCTACGTCTACTTCCGCATCGACCTCAGCCTCCTGGACTAG

Related Sequences

XP_004870011.1 Protein

Atp6v1c2 PREDICTED: V-type proton ATPase subunit C 2 isoform X5 [Heterocephalus glaber]

Length: 427 aa      View alignments
>XP_004870011.1
MSEFWLISAPGDKENLQALERMNTVTSKSNLSHNTKFSIPDFKVGTLDSLVGLSDELGKLDTFAESLIKRMAQTVADVMEDSEGKVQENLLANGDNLTSFVSHFEWDMAKYPTKQTLVSVVDTVAKQLAQIEADLKSRTATYSALKTALENLEKRSTGNLFTRTLSDIVSKEDFVLDSEYLVTLLVIVPKASYAQWQKTYESLSDMVVPRSTKLIAEDPEGGLFTVTLFRRVMDDFKTKAKENKFMVREFYYDEKEIKKEREEMTRLLSDKKQQYQNSCVTLKKGSSISRDHKVKGAPLGSPTRLAAGQPDRERESEGEGEGPLLRWLKVNFSEAFTAWIHIKALRVFVESVLRYGLPVNFQAVLLQPHKKSATKRLREVLNSVFRHLDEVAAASVLDASVEIPGLQLGSQDYFPYVYFRIDLSLLD