Sequence details NCBI ID: XM_004869932.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ddx1
Gene Name DEAD (Asp-Glu-Ala-Asp) box helicase 1
Entrez Gene ID 101718684

Database interlinks

Part of NW_004624865.1 (Scaffold)

For more information consult the page for NW_004624865.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

DDX1 ENSCPOG00000009816 (Guinea pig)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box helicase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008811, Guinea pig)

Protein Percentage 97.81%
CDS Percentage 92.42%
Ka/Ks Ratio 0.0342 (Ka = 0.011, Ks = 0.3211)

DDX1 ENSG00000079785 (Human)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box helicase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000370745, Human)

Protein Percentage 97.7%
CDS Percentage 88.06%
Ka/Ks Ratio 0.01635 (Ka = 0.0107, Ks = 0.6552)

Ddx1 ENSMUSG00000037149 (Mouse)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000065987, Mouse)

Protein Percentage 96.89%
CDS Percentage 87.03%
Ka/Ks Ratio 0.01959 (Ka = 0.0144, Ks = 0.7343)

Ddx1 ENSRNOG00000006652 (Rat)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box helicase 1 (Ddx1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009100, Rat)

Protein Percentage 97.43%
CDS Percentage 87.57%
Ka/Ks Ratio 0.01712 (Ka = 0.0119, Ks = 0.6956)

Genome Location

Sequence Coding sequence

Length: 2409 bp    Location: 927383..898850   Strand: -
Raw sequence   
>XM_004869932.1
ATGAGCATGCGCGCAGCTGCCCGGCGGGTCTTTTCTTGCCTCGGTACCTTTTTCCCGGGATCCAGTTCCCGCCGGGCGGGACTCGGAACCCCGAAGGCCGCGGCCCGGAAGTGCGTGCAGCAGCGATACGGCAAGTCATTGGGGACAGAGGGAGTGTGCTGGAGGAGCCGCGAGGACGGTGCGAACATGGCGGCCTTCTCCGAAATGGGTGTTATGCCTGAGATAGCCCAGGCAGTGGAAGAGATGGATTGGCTTCTCCCCACTGACATCCAGGCGGAGTCTATCCCCCTGATCCTAGGAGGGGGTGACGTGCTGATGGCTGCAGAAACAGGAAGTGGGAAAACTGGTGCATTCAGTATTCCGGTCATCCAGATAGTGTATGAAACTCTGAAAGACCAACAGGAAGGCAAAAAGGGGAAAACAACAATTAAAACTGGTGCTTCAGTGCTCAACAAGTGGCAGATGAACCCATATGATAGAGGCTCTGCTTTTGCGATTGGGTCAGATGGGGTTTGTTGTCAAAGCAGAGAAGTGAAGGAGTGGCACGGATGCCGAGCTACCAAAGGACTGGTGAAAGGGAAACACTACTATGAAGTATCCTGTCATGACCAAGGGCTCTGCAGAGTCGGGTGGTCTACCATGCAGGCCTCCTTAGACCTTGGTACTGACAAGTTTGGATTCGGCTTTGGTGGAACGGGAAAGAAATCCCACAATAAACAGTTTGATAATTATGGAGAGGAATTCACTATGCATGATACTATTGGATGTTACCTGGATATTGATAAAGGGCATGTAAAGTTCTCCAAAAATGGAAAAGACCTTGGTCTGGCCTTTGAAATCCCCCCACATATGAAAAACCAAGCCCTCTTTCCTGCCTGTGTTTTGAAGAATGCTGAGCTGAAATTTAACTTCGGCGAAGAAGACTTTAAGTTTCCACCAAAAGATGGATTTGTTGCTCTCTGCAAGGCACCAGATAGCTATGTGGTCAAGTCACAGCATTCAGGCAACGCACAGGTGACTCAAACAAAGTTTCTCCCCAACGCTCCCAAGGCTCTCATAGTCGAACCCTCCCGGGAGCTCGCTGAACAAACTTTGAATAATGTCAAGCAGTTTAAGAAATACATTGATAATCCTAGATTAAGGGAGCTTCTGATAATTGGAGGTGTTGCAGCACGGGACCAGCTCTCTGTTTTGGAGAATGGGGTGGATATCGTCGTCGGGACTCCTGGAAGGCTAGATGACTTGGTGTCGACTGGAAAGCTGAACCTGTCTCAAGTTCGGTTCCTGGTCCTGGATGAAGCAGACGGTCTTCTTTCTCAAGGTTATTCTGATTTTATAAATCGGATGCACAGCCAGATTCCTCAGATTACCTCTGATGGAAAAAGACTCCAGGTGATCGTTTGCTCTGCTACCTTGCACTCCTTTGATGTGAAGAAGCTGTCTGAGAAGATAATGCATTTTCCTACGTGGGTGGATTTAAAGGGAGAAGATTCTGTTCCAGACACTGTGCACCACGTGGTTGTCCCTGTGAACCCCAAGACTGACAGACTCTGGGAACGGCTGGGGAAAAACCATATCCGGACCGATGATGTCCATGCAAAAGACAACACAAGACCTGGGGCCAACAGCGCAGAGATGTGGTCTGAAGCTGTCAAAGTCCTGAAGGGAGAGTATGCCGTCCGAGCCATCAAGGAGCACAAGATGGACCAGGCAATCATCTTCTGCAGAACCAAGATCGACTGTGACAACTTGGAGCAGTACTTCATGCAGCAGGGAGGAGGCCCTGATAAGAAAGGACACCAGTTCTCGTGTGTTTGTCTTCATGGTGACAGGAAGCCTCACGAGAGAAAGCAGAACTTGGAAAGATTCAAGAAAGGAGATGTAAGATTCTTGATCTGCACAGACGTAGCTGCCAGAGGGATTGATATCCACGGTGTTCCTTACGTTATAAACGTGACCCTGCCTGATGAGAAGCAGAACTACGTGCACCGCATCGGCCGCGTAGGGAGAGCAGAAAGGATGGGACTGGCCATTTCTCTGGTGGCGACCGAAAAAGAAAAGGTGTGGTACCACGTGTGCAGCAGCCGCGGGAAGGGCTGCTACAACACCCGGCTCAAGGAGGACGGTGGCTGCACCATCTGGTACAACGAGATGCAGCTGCTGTCTGAGATAGAAGAACACCTGAACTGCACCATTTCTCAGGTGGAGCCAGACATAAAGGTTCCGCTGGATGAGTTTGACGGGAAGGTTACCTACGGTCAGAAAAGGGCCGCCGGGGGTGGGAACTACAAAGGCCACGTGGACATCCTGGCCCCTACCGTCCAGGAGCTGGCTGCCCTGGAGAAGGAGGCCCAGACCTCCTTCCTGCACCTGGGCTACCTCCCCAACCAGCTCTTCAGGACCTTCTGA

Related Sequences

XP_004869989.1 Protein

Ddx1 PREDICTED: ATP-dependent RNA helicase DDX1 [Heterocephalus glaber]

Length: 802 aa      View alignments
>XP_004869989.1
MSMRAAARRVFSCLGTFFPGSSSRRAGLGTPKAAARKCVQQRYGKSLGTEGVCWRSREDGANMAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGVCCQSREVKEWHGCRATKGLVKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEDFKFPPKDGFVALCKAPDSYVVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNVKQFKKYIDNPRLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGANSAEMWSEAVKVLKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPLDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQLFRTF