Details from NCBI annotation

Gene Symbol Ssrp1
Gene Name structure specific recognition protein 1, transcript variant X4
Entrez Gene ID 101696992

Database interlinks

Part of NW_004624864.1 (Scaffold)

For more information consult the page for NW_004624864.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SSRP1 ENSCPOG00000000480 (Guinea pig)

Gene Details

structure specific recognition protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000423, Guinea pig)

Protein Percentage 97.6%
CDS Percentage 92.56%
Ka/Ks Ratio 0.01595 (Ka = 0.0097, Ks = 0.6083)

Genome Location

Sequence Coding sequence

Length: 2130 bp    Location: 3253876..3262109   Strand: +
>XM_004869785.1
ATGGCAGAGACGCTGGAGTTCAACGACATCTACCAGGAGGTGAAAGGCTCCATGAATGATGGTCGCCTAAGGCTGAGCCGCCAGGGGATCATCTTCAAGAACAGCAAGACGGGCAAAGTGGACAATGTCCAGGCCGGGGAGCTGACTGAGGGCATCTGGCGACGGGTAGCTCTGGGCCACGGACTGAAACTGCTCACGAAGAATGGCCATGTCTACAAGTATGACGGGTTCCGGGAATCGGAGTTTGAGAAACTCTCCGATTTCTTCAAAACCCACTACCGCCTGGAACTCATGGAGAAGGACCTGTGTGTGAAGGGTTGGAACTGGGGCACAGTGAAGTTTGGGGGGCAGCTGCTCTCCTTCGACATCGGTGAGCAGCCCGTCTTCGAGATCCCCCTCAGCAACGTGTCCCAGTGCACCACAGGCAAGAACGAGGTGACGCTGGAGTTTCACCAGAATGATGACGCAGAGGTCTCCCTCATGGAGGTGCGGTTCTACGTGCCTCCCACGCAGGAGGATGGCATAGACCCTGTCGAGGCCTTCGCCCAGAATGTGCTGTCGAAGGCGGATGTCATCCAGGCCACCGGAGACGCCATCTGCATCTTCCGGGAGCTGCAGTGCCTGACCCCGCGTGGCCGCTATGACATCCGCATCTACCCCACCTTCCTGCACCTGCACGGCAAGACCTTTGACTACAAGATCCCCTACACCACGGTGCTGCGCCTCTTCCTGCTGCCCCACAAGGACCAGCGCCAGATGTTCTTCGTGATCAGCCTGGACCCCCCGATCAAGCAGGGCCAGACCCGGTACCACTTCCTCATCCTCCTCTTCTCCAAGGACGAGGACATCTCCTTGACCCTCAACATGAATGAGGAGGAGGTGGAGAAGCGCTTTGAGGGGCGGCTCACCAAGAACATGTCTGGCTCGCTCTACGAGATGGTTAGTCGGGTCATGAAAGCCCTTGTGAACCGCAAGATCACGGTCCCTGGCAACTTCCAAGGGCACTCGGGGGCCCAGTGCATCACCTGCTCCTACAAGGCCAGCTCGGGGCTGCTGTACCCCCTGGAGCGGGGCTTCATCTACGTGCATAAGCCCCCAGTGCACATCCGCTTCGACGAGATTGCCTTCGTCAACTTCGCCCGCGGCACCACCACCACCCGCTCCTTTGACTTCGAGATCGAGACCAAGCAAGGCACGCAGTACACCTTCAGCAGCATTGAGAGGGAGGAGTACGGGAAGCTGTTCGATTTCGTCAATGCGAAGAAGCTCAACATCAAGAACCGCGGCCTGAAAGAGGGCATGAACCCAAGCTACGACGAGTATGCCGACTCCGACGAGGACCAGCACGATGCCTACCTGGAGCGCATGAAGGAGGAGGGCAAGATCCGGGAGGAGAACGCCAACGACAGCAGCGAGGACTCGGGCGAGGAGACGGACGAGTCCTTCAACCCTGGGGAGGAGGAGGAGGACGTGGCTGAGGAGTTCGACAGCAATGCCTCGGCCAGCTCCTCCAGCAATGAGGGTGACAGCGCCCGGGAAGAGAAGAGGAGGAAACAGCTCAAAAGGGCCAAGGTGGCCAAGGATCGCAAGAGCCGCAAGAAGACCGTGGAGGCGAAGAAGGGCAAAGACCCCAACGCCCCTAAGAGGCCGATGTCTGCGTACATGCTGTGGCTCAACGCCAGCCGGGAGAAGATCAAGTCCGACCACCCTGGGATCAGCATCACGGACCTTTCCAAGAAGGCCGGTGAGATCTGGAAGGGGATGCCCAAGGAGAAGAAGGAGGAGTGGGACCACAAGGCTGAGGATGCCAGGAGGGAGTATGAAAAAGCCATGAAAGAATACGAAGGGGGCCGAGGTGAGCCTTCGAAGAGGGACAAGTCGAAGAAGAAGAAGAAAGTGAAAGCCAAGATGGATAAGAAATCCACGCCCTCTCGGGGCTCCTCATCCTCCAAGTCTTCGTCCAGGCAGCTAAGTGAGAGCTTTAAGAGCAAGGAATTTGTGTCCAGCGACGAGAGCTCTTCAGGAGAGAACAAGAGCAAGAAGAAGAGGCGGCGGAGTGAGGACTCAGAAGAAGAGGACCTGGCCAGTACTCCCAGCTCAGAGGGCTCGGCGTCTGGATCCGACGAGTAG

Related Sequences

XP_004869842.1 Protein

Ssrp1 PREDICTED: FACT complex subunit SSRP1 isoform X4 [Heterocephalus glaber]

Length: 709 aa      View alignments
>XP_004869842.1
MAETLEFNDIYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNVQAGELTEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLSFDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGIDPVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEIAFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSEDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSAREEKRRKQLKRAKVAKDRKSRKKTVEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMPKEKKEEWDHKAEDARREYEKAMKEYEGGRGEPSKRDKSKKKKKVKAKMDKKSTPSRGSSSSKSSSRQLSESFKSKEFVSSDESSSGENKSKKKRRRSEDSEEEDLASTPSSEGSASGSDE