Details from NCBI annotation

Gene Symbol Clp1
Gene Name cleavage and polyadenylation factor I subunit 1
Entrez Gene ID 101723956

Database interlinks

Part of NW_004624864.1 (Scaffold)

For more information consult the page for NW_004624864.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLP1 ENSCPOG00000012554 (Guinea pig)

Gene Details

cleavage and polyadenylation factor I subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011296, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 91.79%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.4912)

CLP1 ENSG00000172409 (Human)

Gene Details

cleavage and polyadenylation factor I subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000434995, Human)

Protein Percentage 99.76%
CDS Percentage 87.22%
Ka/Ks Ratio 0.0012 (Ka = 0.0011, Ks = 0.9017)

Clp1 ENSMUSG00000027079 (Mouse)

Gene Details

CLP1, cleavage and polyadenylation factor I subunit

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000129300, Mouse)

Protein Percentage 98.82%
CDS Percentage 85.96%
Ka/Ks Ratio 0.00523 (Ka = 0.0054, Ks = 1.0292)

Clp1 ENSRNOG00000007416 (Rat)

Gene Details

cleavage and polyadenylation factor I subunit 1 (Clp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009726, Rat)

Protein Percentage 98.82%
CDS Percentage 86.12%
Ka/Ks Ratio 0.00545 (Ka = 0.0054, Ks = 0.9946)

Genome Location

Sequence Coding sequence

Length: 1278 bp    Location: 3067051..3063555   Strand: -
>XM_004869771.1
ATGGGCGAGGAGGCCAATGACGACAAGAAGCCCACGACCAAATTCGAACTAGAGCGAGAAACAGAACTGCGCTTTGAGGTGGAGGCGTCGCAGTCGGTTCAGCTGGAGCTGTTGGCTGGCATGGCAGAGATCTTTGGCACCGAGCTGACACGAAACAAGAAGTTCACCTTTGACGCCGGGGCCAAGGTGGCTGTTTTCACTTGGCATGGCTGCTCCGTGCAGCTGAGTGGCCGCACCGAGGTGGCTTACGTCTCCAAGGACACCCCTATGTTGCTTTATCTCAACACTCACACGGCCCTGGAGCAGATGCGGAGGCAGGCTGAAAAGGAAGAGGAGCGTGGGCCCCGGGTGATGGTTGTCGGCCCCACAGATGTGGGCAAATCCACGGTGTGTCGCCTGCTGCTCAACTATGCAGTGCGTTTGGGACGCCGTCCTACTTACGTGGAGCTGGATGTGGGCCAGGGCTCTGTGTCCATCCCTGGTACCATGGGAGCCCTGTACATTGAGCGGCCTGCAGATGTGGAAGAAGGTTTCTCCATCCAGGCCCCGCTGGTGTATCATTTTGGCTCCACCACTCCGGGGACCAACATCAAGCTGTATAATAAGATTACATCTCGCCTAGCAGATGTGTTTAACCAGCGGTGTGAGGTGAACCGAAGGGCTTCCGTGAGCGGCTGCGTTATAAATACTTGCGGCTGGGTCAAGGGCTCGGGCTACCAGGCGCTGGTGCACGCAGCCTCTGCCTTCGAGGTGGACGTGGTCGTGGTGCTGGACCAGGAGCGGCTGTACAATGAGCTGAAGCGGGACCTGCCTCACTTCGTTCGCACGGTGCTGCTCCCCAAGTCTGGGGGCGTGGTGGAGCGCTCTAAGGACTTCCGGCGGGAGTGCAGGGACGAGCGCATTCGTGAGTATTTCTACGGCTTCCGGGGCTGCTTCTATCCCCATGCCTTCAATGTCAAATTTTCTGATGTGAAAATCTACAAGGTGGGCGCGCCCACCATCCCCGACTCCTGTCTCCCGCTGGGCATGTCCCAGGAGGACAACCAGCTCAAGCTGGTGCCCGTCACCCCGGGCCGGGACATGGTGCACCACCTGCTGAGCGTCAGCACGGCTGAGGGCACCGAGGAGAACCTCTCGGAGACCAGCGTGGCCGGCTTCATCGTGGTGACCAGCGTGGACCTGGAGCACCAGGTGTTCACTGTGCTCTCCCCGGCGCCCCGCCCTCTGCCCAAGAACTTCCTGCTCATCATGGACATCCGGTTCATGGATCTCAAGTAG

Related Sequences

XP_004869828.1 Protein

Clp1 PREDICTED: polyribonucleotide 5'-hydroxyl-kinase Clp1 [Heterocephalus glaber]

Length: 425 aa      View alignments
>XP_004869828.1
MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAGAKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSIQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIRFMDLK