Sequence details NCBI ID: XM_004869756.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ctnnd1
Gene Name catenin (cadherin-associated protein), delta 1, transcript variant X8
Entrez Gene ID 101717872

Database interlinks

Part of NW_004624864.1 (Scaffold)

For more information consult the page for NW_004624864.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CTNND1 ENSCPOG00000005316 (Guinea pig)

Gene Details

catenin (cadherin-associated protein), delta 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004780, Guinea pig)

Protein Percentage 95.54%
CDS Percentage 90.18%
Ka/Ks Ratio 0.0402 (Ka = 0.02, Ks = 0.4979)

CTNND1 ENSG00000198561 (Human)

Gene Details

catenin (cadherin-associated protein), delta 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000382004, Human)

Protein Percentage 95.76%
CDS Percentage 88.16%
Ka/Ks Ratio 0.04165 (Ka = 0.0229, Ks = 0.5503)

Ctnnd1 ENSMUSG00000034101 (Mouse)

Gene Details

catenin (cadherin associated protein), delta 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000064518, Mouse)

Protein Percentage 94.88%
CDS Percentage 85.7%
Ka/Ks Ratio 0.03461 (Ka = 0.0268, Ks = 0.7753)

Ctnnd1 ENSRNOG00000030790 (Rat)

Gene Details

catenin (cadherin associated protein), delta 1 (Ctnnd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063519, Rat)

Protein Percentage 95.06%
CDS Percentage 86.54%
Ka/Ks Ratio 0.0371 (Ka = 0.0258, Ks = 0.6954)

Genome Location

Sequence Coding sequence

Length: 2964 bp    Location: 3000353..2952599   Strand: -
Raw sequence   
>XM_004869756.1
ATGGAGGACTCAGAGGTGGAGTCGACCGCCAGCATCTTGGCCTCTGTGAAGGAGCAAGAGGCCCAGTTTGAGAAGCTGACCCGGGCGCTGGAGGAGGAACGGCGCCACGTCTCGGCGCAGCTGGAGCGCGTCCGGGTCTCGCCACAAGATGCCAACCCTCTCATGGCCAACGGCACCCTCACCCGCCGTCATCAGAACGGCCGGTTTGTGGGCGATGCTGACCTTGAGAGACAGAAACTGTCAGATCTGAAACTCAACGGACCCCAGGAGCACAGTCACCTTCTGTACAGCACCATCCCCAGGATGCAGGAGCCAGGGCAGATCGTGGAGACCTACACAGAGGAGGACCCTGAGGGAGCCATGTCGGTGGTCTCTGTGGAGACCTCAGATGATGGGACCACGCGCCGCACGGAGACCACGGTGAAGAAAGTAGTGAAGACCGTGACGACCCGGACAGTGCAGCCCATGCCTGTGGGACCAGACGGGCTGCCTGTGGACACCTCCTCGGCTTCTAACAGCTACATCCAGACTCTGGGCCGTGACTTCCGCAAGAATGGCAACGGGGGCCCGGGTCCCTGCGTGGGGCAGGCGGGCACCGCCACCCTTCCTCGGAACTTCCATTACCCTCCCGACGGGTACAGCCGCCACTACGAAGACGGCTACCCAGGGGGCACCGACAGCTACGGCAGCCTGTCCCGGGTGGCCCGCATCGAGGAGCGGTACCGGCCCAGCATGGAGGGCTACCGGGCCCCCAGTCGGCAGGACGTCTACGGGCCCCAGCCCCAGGTGCGGGTGGGTGGGAGCAGCGTGGATCTGCACCGCTTCCACCCAGAGCCCTACGGGCTGGAGGACGACCAGCGCAGCGTGGGCTATGACGACCTGGACTACGGCATGATGTCTGACTACGGCACTGCCCGCCGCACCGGAACGCCCTCCGACCCTCGCCGCCGCCTCAGGAGCTATGAAGACATGATTGGGGAGGAGGTGCCGTCGGATCAGTACTACTGGGCTCCTCTGGCCCAGCATGAGCGAGGAAGCCTCGCAAGCTTGGACAGCCTTCGCAAGGGAGGCCCCCCGCCTCCAAACTGGAGACAGCCAGAGCTGCCAGAGGTGATCGCCATGCTGGGGTTCCGCCTGGATGCCGTCAAGTCCAACGCAGCCGCGTACCTGCAGCACTTGTGCTACCGCAATGACAAGGTGAAGACCGATGTGCGGAAGCTCAAGGGCATCCCAGTGCTGGTGGGATTGCTAGACCACCCCAAAAAGGAAGTGCACCTTGGGGCCTGCGGTGCTCTCAAGAATATCTCTTTTGGACGGGACCAAGATAACAAGATTGCCATAAAAAACTGTGACGGTGTTCCTGCCCTTGTGCGGCTGCTGCGAAAAGCTCGTGATCTGGACCTTACTGAAGTCATTACTGGAACCCTGTGGAACCTGTCATCCCACGACTCGATCAAGATGGAAATCGTGGACCACGCGCTGCACGCCTTGACGGATGAAGTGATCATCCCGCACTCTGGCTGGGAGAGGGAGCCGAGTGAGGACTGCAAGCCGCGCCATATCGAGTGGGAGTCCGTGCTCACCAACACAGCTGGCTGCCTGAGGAATGTAAGCTCAGAGAGGAGTGAAGCCCGCCGGAAGCTTCGGGAGTGCGATGGCCTAGTTGATGCCCTCATTTTCATTGTCCAGGCTGAGATTGGACAGAAGGATTCTGACAGCAAGCTCGTGGAGAACTGCGTCTGCCTCCTGCGGAACTTGTCCTATCAGGTTCACCGGGAGATCCCACAGGCCGAGCGCTACCAGGAGGCACCGCCCACTGTTGCCAACAACTCAGGGCCCCACGCGGCCAGCTGCTTTGGCGCCAAGAAGGGCAAAGATGAATGGTTCTCCAGAGGGAAAAAACCCACAGAGGATCCAGCAAATGATACAGTGGACTTCCCTAAAAGAACCAGTCCTGCTCGAGGCTATGAGCTCCTGTTTCAGCCAGAGGTGGTCCGGATATACATCTCACTTCTCAAAGAAAGCAAGACCCCTGCCATCCTGGAAGCCTCTGCCGGAGCCATTCAGAACTTGTGTGCTGGGCGCTGGACATACGGCCGATACATCCGCTCCGCCCTGCGTCAGGAGAAGGCTCTCTCGGCCATAGCGGACCTCCTGACCAATGAGCACGAGCGCGTGCTGAAGGCCGCCTCCGGGGCACTGAGGAACCTGGCTGTGGATGCTCGCAACAAGGAGCTCATTGGTAAACATGCCATTCCCAACTTGGTGAAGAATTTGCCAGGAGGGCAGCAGAACGCCTCCTGGAGTTTCTCAGAGGATACCGTCATCTCTCTTTTGAACACCATCAATGAGGTTATTGCTGAGAACTTGGAGGCTGCCAAAAAGCTTCGCGAGACACAGGGCATTGAGAAGCTGGTGTTGATCAACAAATCAGGGAATCGCTCGGAAAAAGAAGTTCGAGCAGCAGCACTGGTGTTGCAGACAATCTGGGGGTACAAGGAGCTGAGGAAGCCCCTGGAAAAAGAAGGCTGGAAGAAGTCAGACTTCCAGGTGAACCTCAGCAGTGCTACGCGGAGCCAGAGCAGCCGTTCCTATGACGACACCACGCTGCCCCTCATCGACCGCACCCAGCAGCTAGATAAGAAACCTGACCGGGAAGAAATTCAAATGAGCAATATGGGATCAAACACAAAATCACTAGATAACAACTATTCTACACTGAACGAGAGGGATCACAGCAGAACACTGGATCGAAGCGGGGATCTGGGTGACATGGAGCCTTTGAAGGGAACGCCCTTGATGCAGGACCAGGGGCAGGAGTCTCTGCAGGAAGAGTTGGATGTGTTGGTTTTGGATGATGAGGGGGACCCGGTGTCTTACCCCTCCATGGTATGTCCTCCAGCCACTCGCAGACTGGCCCGGGAAGGAGCCCTGTGTGCCAGCCATTGCCAATCACCCCTCTGA

Related Sequences

XP_004869813.1 Protein

Ctnnd1 PREDICTED: catenin delta-1 isoform X8 [Heterocephalus glaber]

Length: 987 aa      View alignments
>XP_004869813.1
MEDSEVESTASILASVKEQEAQFEKLTRALEEERRHVSAQLERVRVSPQDANPLMANGTLTRRHQNGRFVGDADLERQKLSDLKLNGPQEHSHLLYSTIPRMQEPGQIVETYTEEDPEGAMSVVSVETSDDGTTRRTETTVKKVVKTVTTRTVQPMPVGPDGLPVDTSSASNSYIQTLGRDFRKNGNGGPGPCVGQAGTATLPRNFHYPPDGYSRHYEDGYPGGTDSYGSLSRVARIEERYRPSMEGYRAPSRQDVYGPQPQVRVGGSSVDLHRFHPEPYGLEDDQRSVGYDDLDYGMMSDYGTARRTGTPSDPRRRLRSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDLDLTEVITGTLWNLSSHDSIKMEIVDHALHALTDEVIIPHSGWEREPSEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERYQEAPPTVANNSGPHAASCFGAKKGKDEWFSRGKKPTEDPANDTVDFPKRTSPARGYELLFQPEVVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVLKAASGALRNLAVDARNKELIGKHAIPNLVKNLPGGQQNASWSFSEDTVISLLNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDFQVNLSSATRSQSSRSYDDTTLPLIDRTQQLDKKPDREEIQMSNMGSNTKSLDNNYSTLNERDHSRTLDRSGDLGDMEPLKGTPLMQDQGQESLQEELDVLVLDDEGDPVSYPSMVCPPATRRLAREGALCASHCQSPL