Sequence details NCBI ID: XM_004869718.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Stx3
Gene Name syntaxin 3, transcript variant X4
Entrez Gene ID 101705394

Database interlinks

Part of NW_004624864.1 (Scaffold)

For more information consult the page for NW_004624864.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

STX3 ENSCPOG00000005033 (Guinea pig)

Gene Details

syntaxin 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004530, Guinea pig)

Protein Percentage 84.91%
CDS Percentage 85.03%
Ka/Ks Ratio 0.13319 (Ka = 0.0893, Ks = 0.6707)

STX3 ENSG00000166900 (Human)

Gene Details

syntaxin 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000338562, Human)

Protein Percentage 83.92%
CDS Percentage 82.05%
Ka/Ks Ratio 0.09544 (Ka = 0.0978, Ks = 1.0252)

Stx3 ENSMUSG00000041488 (Mouse)

Gene Details

syntaxin 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000069529, Mouse)

Protein Percentage 83.22%
CDS Percentage 81.7%
Ka/Ks Ratio 0.09839 (Ka = 0.102, Ks = 1.0365)

Stx3 ENSRNOG00000021013 (Rat)

Gene Details

syntaxin 3 (Stx3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028535, Rat)

Protein Percentage 83.22%
CDS Percentage 80.77%
Ka/Ks Ratio 0.08468 (Ka = 0.1024, Ks = 1.2093)

Genome Location

Sequence Coding sequence

Length: 861 bp    Location: 1090417..1056500   Strand: -
Raw sequence   
>XM_004869718.1
ATGAAGGACCGGCTGGAGCAGCTGAGGGCGAAGCAGCTGACACAGGATGATGATACTGATGAGGTTGAGATCTCGATCGACAACACAGCCTTCATGGATGAATTCTTCTCTGAGATTGAGGAAACTCGACTCAACATTGACAAGATCTCGGAGCACGTGGAGGAGGCAAAGAAACTCTACAGTATCATTCTCTCTGCACCCATTCCGGAGCCAAAAACCAAGGATGACCTCGAACAGCTCACCGTGGACATCAAGAAAAGGGCCAACAGTGTCCGGAACAAACTCAAGAGTATGGAGAGGCACATTGAGGAAGATGAGGCCCGGTCGTCAGCTGACCTTCGCATTCGGAAATCCCAGCACTCTGTCCTCTCCCGGAAGTTTGTGGAGGTGATGACCAAATACAATGAGGCACAGGTGGACTTCCGTGAACGCAGCAAAGGGCGAATCCAGCGGCAGCTTGAAATTACTGGGAAAAAGACTACAGATGAGGAGCTGGAGGAGATGTTGGAGAGTGGCAATCCTGCCATCTTCACTTCCGGGATCATTGACTCGCAGATTTCCAGGCAAGCCCTCAGTGAGATTGAGGGTCGGCATAAGGACATTGTAAGGCTGGAGAGCAGCATCAAGGAGCTCCATGACATGTTCATGGACATCGCCATGCTGGTGGAGAACCAGGGAGCCATGATTGACCGTATTGAGAACAACATGGACCAGTCAGTGGGCTTCGTGGAGCGGGCTGTCGCAGATACCAAAAAGGCGGTCAAGTATCAGAGTGAAGCCCGGAGGTTGTTTCTGATCTCTCCTTTCTACTTCCTGGGTTTGTGGCTGAATTCTCCAGTTGTTCACCATCCTGAACACTGA

Related Sequences

XP_004869775.1 Protein

Stx3 PREDICTED: syntaxin-3 isoform X4 [Heterocephalus glaber]

Length: 286 aa      View alignments
>XP_004869775.1
MKDRLEQLRAKQLTQDDDTDEVEISIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSIILSAPIPEPKTKDDLEQLTVDIKKRANSVRNKLKSMERHIEEDEARSSADLRIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGIIDSQISRQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGAMIDRIENNMDQSVGFVERAVADTKKAVKYQSEARRLFLISPFYFLGLWLNSPVVHHPEH