Sequence details NCBI ID: XM_004869664.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gdpd4
Gene Name glycerophosphodiester phosphodiesterase domain containing 4
Entrez Gene ID 101712373

Database interlinks

Part of NW_004624863.1 (Scaffold)

For more information consult the page for NW_004624863.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GDPD4 ENSCPOG00000008503 (Guinea pig)

Gene Details

glycerophosphodiester phosphodiesterase domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007644, Guinea pig)

Protein Percentage 76.74%
CDS Percentage 86.32%
Ka/Ks Ratio 0.74738 (Ka = 0.1438, Ks = 0.1924)

GDPD4 ENSG00000178795 (Human)

Gene Details

glycerophosphodiester phosphodiesterase domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000320815, Human)

Protein Percentage 71.43%
CDS Percentage 81.92%
Ka/Ks Ratio 0.65043 (Ka = 0.1904, Ks = 0.2928)

Gdpd4 ENSMUSG00000035582 (Mouse)

Gene Details

glycerophosphodiester phosphodiesterase domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000036772, Mouse)

Protein Percentage 61.97%
CDS Percentage 72.74%
Ka/Ks Ratio 0.50763 (Ka = 0.2908, Ks = 0.5728)

Gdpd4 ENSRNOG00000028470 (Rat)

Gene Details

Protein Gdpd4

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000038374, Rat)

Protein Percentage 64.33%
CDS Percentage 74.29%
Ka/Ks Ratio 0.47351 (Ka = 0.2645, Ks = 0.5585)

Genome Location

Sequence Coding sequence

Length: 2166 bp    Location: 405923..299979   Strand: -
Raw sequence   
>XM_004869664.1
ATGCCTAGGAAGGTTAACAGGATTGAATCCAGAAGAAAGGAGGAAGAAAACCGTAATCCACAGATTGCACACATCTTCAATTACAAGCGCTATATCACCTTCCTTACTGGCTGCTACAGTTGCCATTGGAAATTCAGACGGTGGGAAAAAACTAAACTTGGATCCTGTTGCTGCACTCGGAGAGAACAATGCTTTTGTGTGTTCCTGGCAGTTGCATTTGTCTTCTCTGTGATCATGCTCTTCACATGGATAGAAACCTCTAATGAGTACTTCGGCTTTGACTGGGTCGTTTTTCTAGTAACAGGAGCCTGGTTCTTCTGGTCCATTCTAATGCTGAGTTTATTTGGGATACTGACTGTCTACACTTCGTTGTTATTGATACTTGGAGTTTTGTTGCTTTGGGAGAGGATTGAGCTATATCTGCACACATGTCATAAGATCCTGATTGTGTTAATGATCCTGGTGCACATTTTCTTAATGGTGATTTTATTCAAATTCTGGAATGAAAGGTGGCTGGTAGTTGGGCTGTCACTGAAGATCTTTGCTCCTTACGTGCACCTGAGCTGCATAATTCTGATGGTTATCATTTCCTGGCCTCTGACCTTCTACGTGGTGCATTTGGAAGGAAAAATTAGAATAAGAAGACACAGAATGGCATATTACGAGAAAGAAAGACTCAAGAAATGTAATATATTCACAAGGTTAAGAGCTCTACAATTGGCTGTTGGATTGCCCTTTTTTCTTATTCTCATATGTCTCTATGCGATGCCACTGGGGATTTATTCTCCCTGCATTCAAGAGAAGGAAGAGTTGGGACCTAAGCCAGCCTTCTTTGCACACAGAGGTTCACCCATGGTAGGGCCAGAAAATACCATGATGGCCTTTGAGAAAGCTGTTGAAGAAGGAGCCTCTGGTCTGGAGACTGATGTACATATAAGTTTTGATAATGTGCCTTATCTCATGCATGACTATGACTTGAGAAGAACAACCAATATCAGAGAGGTCATGCCAGAGGCTGCTTATAGTCACCCTTCCTCCTTCAATTGGACTACTTTGTCAACTCTGAATGCTGGTGAATGGTTCTTGAAAACGAGACCATTTTTCAATATGAAACGTCTATCACAGGCTGATAAAAAACGAGCAAGAAACCAGTCAATTCCACGACTAGCTGATTTATTGAAAATTGCAAAGAAGGAAAAAAAAATTGTGATATTTGATCTTTTTGGCCCTCCACAAAAACATCCTCTCAGACACACATTTGTCCATCAGGTAGTAAGCGTGATCCTTGCTTCTAAAATTGAACAAAATCTGATTTTTTGGTTGCCAGGTCATGATAGGCAGTATGTCAGGTTCATGGCCCCTGGTTTTCAGCATGTGGGCCGTTTAGTCTCTGTTGAACACCTAACAAAAGAAAATATCAGTATAATAAATGTGGACTACAAGAGGTTATTCTACAAAGGGTTAAGGGATTATCAAGCAGCTAATATCTATATCAATTTATACATTGTAAATGAGCCTTGGATTTTCTCACTGGCCTGGTGCTCCAGAATTAACTCAGTGACAACAGACAACATTCCAGTTCTGAGTCAGCTTACTCACCCTCACTTCTTCATGACACCACGGTATTATCTGTCCATATGGCTCCTCCTGGATATTGTTTCTGCAATTTTCATTGCTGCCATATTTTGTTTTCACTGGTGGAGAGAGGTCAAAGAAGAAAAATTGCTTGAAGCCTCCAGAATTTTCAGAGATTCTCAAAGTTTAAGCCTCTCTGTGGAACAAAGTGAAAGTCAAGAAGCTTCACACTTACCTAAAAAGTCTCCTCCCCGAGTTGGAGAAAGTCCTTGGACTCCAGCTTTACCTGGTAGCAGAAGGAAACTCTCACACACTTCCCATTTTGAAGAACACCTCAAGAAGAAACCAGGGTCTATTAAGATCACTCAGAACACCGTTGGACCACTGATGCCCACCACAGACTTTGAAGACAGCCAAGTACCCACCAACTGGGGGCCTGCTGGTGAAGCTGCCCCTCAATCTACATTACTCACCACGAAGGCAGATGAACTAACAGTGCCCTTCACAGAGGCCCCCTATCCTGAAATACACCCAAAGACACCCGTATTAGAACCTGCCAAAGAATCCAATCCATCCGACATCCCCTTATAG

Related Sequences

XP_004869721.1 Protein

Gdpd4 PREDICTED: glycerophosphodiester phosphodiesterase domain-containing protein 4 [Heterocephalus glaber]

Length: 721 aa      View alignments
>XP_004869721.1
MPRKVNRIESRRKEEENRNPQIAHIFNYKRYITFLTGCYSCHWKFRRWEKTKLGSCCCTRREQCFCVFLAVAFVFSVIMLFTWIETSNEYFGFDWVVFLVTGAWFFWSILMLSLFGILTVYTSLLLILGVLLLWERIELYLHTCHKILIVLMILVHIFLMVILFKFWNERWLVVGLSLKIFAPYVHLSCIILMVIISWPLTFYVVHLEGKIRIRRHRMAYYEKERLKKCNIFTRLRALQLAVGLPFFLILICLYAMPLGIYSPCIQEKEELGPKPAFFAHRGSPMVGPENTMMAFEKAVEEGASGLETDVHISFDNVPYLMHDYDLRRTTNIREVMPEAAYSHPSSFNWTTLSTLNAGEWFLKTRPFFNMKRLSQADKKRARNQSIPRLADLLKIAKKEKKIVIFDLFGPPQKHPLRHTFVHQVVSVILASKIEQNLIFWLPGHDRQYVRFMAPGFQHVGRLVSVEHLTKENISIINVDYKRLFYKGLRDYQAANIYINLYIVNEPWIFSLAWCSRINSVTTDNIPVLSQLTHPHFFMTPRYYLSIWLLLDIVSAIFIAAIFCFHWWREVKEEKLLEASRIFRDSQSLSLSVEQSESQEASHLPKKSPPRVGESPWTPALPGSRRKLSHTSHFEEHLKKKPGSIKITQNTVGPLMPTTDFEDSQVPTNWGPAGEAAPQSTLLTTKADELTVPFTEAPYPEIHPKTPVLEPAKESNPSDIPL