Details from NCBI annotation

Gene Symbol Capn5
Gene Name calpain 5, transcript variant X2
Entrez Gene ID 101711536

Database interlinks

Part of NW_004624863.1 (Scaffold)

For more information consult the page for NW_004624863.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CAPN5 ENSCPOG00000004296 (Guinea pig)

Gene Details

calpain 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003875, Guinea pig)

Protein Percentage 92.9%
CDS Percentage 91.59%
Ka/Ks Ratio 0.10539 (Ka = 0.037, Ks = 0.3509)

CAPN5 ENSG00000149260 (Human)

Gene Details

calpain 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000278559, Human)

Protein Percentage 93.13%
CDS Percentage 90.42%
Ka/Ks Ratio 0.05843 (Ka = 0.0317, Ks = 0.5433)

Capn5 ENSMUSG00000035547 (Mouse)

Gene Details

calpain 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000048183, Mouse)

Protein Percentage 92.19%
CDS Percentage 87.29%
Ka/Ks Ratio 0.04917 (Ka = 0.0375, Ks = 0.7619)

Capn5 ENSRNOG00000014251 (Rat)

Gene Details

calpain 5 (Capn5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019370, Rat)

Protein Percentage 92.34%
CDS Percentage 87.71%
Ka/Ks Ratio 0.05242 (Ka = 0.0378, Ks = 0.722)

Genome Location

Sequence Coding sequence

Length: 1923 bp    Location: 149228..202576   Strand: +
>XM_004869662.1
ATGTTCTCGTGTGTGAAGGCCTATGAGGACCAGAACTACTCATCCCTGAAGCGGGCTTGTCTGCGCCGGAAGGTGCTCTTTGAGGATCCGCACTTCCCTGCCACTGATGACTCGCTCTACTACAAGGGTGCTCCGGGACCCGCTGTTAGGTGGAAGCGACCCAAGGACATCTGCGAGGACCCCCGCCTCTTTGTGGATGGCATCAGCTCCCACGACCTGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGCCGCCTGCTCGTCACTGGCTTCCCGGGAATTGCTGTGGCAAAAGGTCATCCCAGACTGGAAAGAGCAGGAGTGGGACCCAGAGAAGCCTGACAACTATGCTGGCATCTTCCACTTCCACTTTTGGCGCTTTGGGGAGTGGGTGGACGTGGTCATTGATGACCGACTACCCACAGTCAACAACCAGCTCATCTACTGCCACTCCAACTCTCGCAACGAGTTCTGGTGCGCCCTGGTGGAGAAGGCCTACGCCAAGCTGGCGGGCTGTTACCAGGCCCTGGATGGAGGTAACACCGCAGATGCGCTGGTGGACTTCACAGGTGGTGTTTCTGAGCCCATCGACCTGACTGAGGGTGACTTTGCCAATGATGAGGCCAAGAGGAACCAGCTGTTTGAGCGAGTGTTAAAGGTGCACAGCCGAGGAGGCCTCATCAGTGCCTCCATCAAGGCTGTGACAGCAGCTGACATGGAGGCCCGCCTGGGGTGCGGCCTGGTGAAAGGCCACGCGTATGCTGTCACCGATGTGCGCAAGGTGCGCCTGGGCCATGGCCTACTGGCCTTCTTCAAGTCGGAGAAGTTGGACATGATTCGCCTGCGCAACCCCTGGGGCGAGCGGGAGTGGAATGGGCCCTGGAGTGACACCTCAGAGGAGTGGCAGAAGGTGAGCAAGACTGAGCGGGAAAAGATGGGGGTGACCGTGCAGGATGATGGCGAGTTCTGGATGACCTTTGAGGACATGTGCCGGTACTTCACTGACATCATCAAGTGCCGCCTCCTCAACACATCCTACCTGAGCATCCACAAGACATGGGAGGAGGCACGGCTGCAAGGTGCCTGGACACGGCATGAGGACTGGTGGCAGAACCGCAGTGGGGGCTGCATCAACCACAAGGACACATTCTTCCAGAACCCACAGTACATCTTTGAGGTCAAGAAGCCAGAAGATGAAGTACTGATCTGCATCCAGCAGCGGCCCAAACGATCTACCCGCCGAGAGGGCAAAGGCGAGAACCTGGCCATTGGCTTTGACATCTATAAGGTAGAAGAGAACCGCCAGTACCGCATGCACAGCCTGCAGCACAAGGTCGCCAGCTCCATCTACATCAACTCACGCAGCGTGTTCCTTCGTACGGACCAGCCCGAGGGCCGCTATGTCATCATCCCCACCACCTTTGAGCCAGGCCACACTGGAGAGTTCCTGCTCCGAGTCTTCACAGATGTGCCCTCCAACTGCCGAGAGCTGCGCCTGGATGAGCCCCCCCGAACCTGCTGGAGCTCCCTGTGTGGCTACCCCAAGCAGGTGACCCAAGTCCATGTCCTGGGGGCTGCTGGCCTTAAGGACTCCACGGCAGGGGCCAACTCTTATGTGATCATCAAGTGTGAGGGGGAAAAAGTTCACTCGCCTGTGCAGAAAGGGACCTCAGTGCCTGAGTATAATGTGAAAGGCATCTTCTACCGCAAGAAGCCAGGCCAGCCCATCACTGTCCAGATTTGGAACCACCGAGTCCTGAAGGATGAGTTCCTGGGCCAGGTGCACCTGAAGGCTGAACCCGATGACCTCCAGGCCCTGCACACCCTCCACCTCCGAGACCGAAATAGCCGGCAACCCAGCGACTTGCCAGGCACCGTTGCTGTGCACATCGTCAGCAGTGCCTCCCTCACAGCTATCTGA

Related Sequences

XP_004869719.1 Protein

Capn5 PREDICTED: calpain-5 isoform X2 [Heterocephalus glaber]

Length: 640 aa      View alignments
>XP_004869719.1
MFSCVKAYEDQNYSSLKRACLRRKVLFEDPHFPATDDSLYYKGAPGPAVRWKRPKDICEDPRLFVDGISSHDLHQGQVGNCWFVAACSSLASRELLWQKVIPDWKEQEWDPEKPDNYAGIFHFHFWRFGEWVDVVIDDRLPTVNNQLIYCHSNSRNEFWCALVEKAYAKLAGCYQALDGGNTADALVDFTGGVSEPIDLTEGDFANDEAKRNQLFERVLKVHSRGGLISASIKAVTAADMEARLGCGLVKGHAYAVTDVRKVRLGHGLLAFFKSEKLDMIRLRNPWGEREWNGPWSDTSEEWQKVSKTEREKMGVTVQDDGEFWMTFEDMCRYFTDIIKCRLLNTSYLSIHKTWEEARLQGAWTRHEDWWQNRSGGCINHKDTFFQNPQYIFEVKKPEDEVLICIQQRPKRSTRREGKGENLAIGFDIYKVEENRQYRMHSLQHKVASSIYINSRSVFLRTDQPEGRYVIIPTTFEPGHTGEFLLRVFTDVPSNCRELRLDEPPRTCWSSLCGYPKQVTQVHVLGAAGLKDSTAGANSYVIIKCEGEKVHSPVQKGTSVPEYNVKGIFYRKKPGQPITVQIWNHRVLKDEFLGQVHLKAEPDDLQALHTLHLRDRNSRQPSDLPGTVAVHIVSSASLTAI