Details from NCBI annotation

Gene Symbol Oma1
Gene Name OMA1 zinc metallopeptidase, transcript variant X4
Entrez Gene ID 101723711

Database interlinks

Part of NW_004624862.1 (Scaffold)

For more information consult the page for NW_004624862.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

OMA1 ENSCPOG00000007240 (Guinea pig)

Gene Details

OMA1 zinc metallopeptidase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006523, Guinea pig)

Protein Percentage 86.54%
CDS Percentage 91.17%
Ka/Ks Ratio 0.4286 (Ka = 0.0722, Ks = 0.1684)

OMA1 ENSG00000162600 (Human)

Gene Details

OMA1 zinc metallopeptidase

External Links

Gene Match (Ensembl Protein ID: ENSP00000360270, Human)

Protein Percentage 76.88%
CDS Percentage 82.4%
Ka/Ks Ratio 0.33753 (Ka = 0.1452, Ks = 0.4302)

Oma1 ENSMUSG00000035069 (Mouse)

Gene Details

OMA1 homolog, zinc metallopeptidase (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000045269, Mouse)

Protein Percentage 72.29%
CDS Percentage 77.33%
Ka/Ks Ratio 0.25999 (Ka = 0.1729, Ks = 0.6649)

Oma1 ENSRNOG00000007214 (Rat)

Gene Details

zinc metallopeptidase homolog (S. cerevisiae) (Oma1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009515, Rat)

Protein Percentage 71.91%
CDS Percentage 77.76%
Ka/Ks Ratio 0.28652 (Ka = 0.1759, Ks = 0.6139)

Genome Location

Sequence Coding sequence

Length: 1566 bp    Location: 1746972..1823261   Strand: +
>XM_004869614.1
ATGAGCTTCATTTATGGACTGCAGTCTACTAGAAACTCTTTTCTCTTCCGGTTTAATCTACTGGGCAGCTGGAGAAAGCGGAACTCACTGGCAGTAACTTCAGCAGGCTGCCATCAGTTTCAAAATTTCTATGTAGTAAATAAATACCAGGGGCTTACATCATTCACTCAGTGTGACAGGTTGACATTTCTGCATGGAAACTTCCATTTTAACAGGACTTTGAATAACAGAAGACCAGGATGCCTCTCAAGTGCCAAAAGTAGGGGCATTTGGGTGATTACCCACAAATGTACCTCCTTTTCAAGATGGGTACTGACCAGAGAAAGTGCAGTTGCTCCTGCCCTTGCAGCTTGGTGTCCTGAGACCTATTCTCCCGCAAGATCTGCCAGGAATTTCCATACTTCTCCACGGGTTCAAGCTGCTCCCGTTCCTCTCCTGTTGGTCCTTCTAAAGCCACTGCAGAAACTACTTGCAATCATCGTGGGCAGGGGCATAAGGAAATGGTGGCAAGCCCTTCCTCCTAACAAAAAGGAACTATTTAGAGAGAGTGTGAGGAGGAATAAATGGAAGCTGTTTCTTGGTTTGAGTACCTGTGGACTGTTATTTGTAGTGTTTTATTTTACTCACCTGGAAGTGAGCCCAATCACAGGAAGGAAAAAGCTACTATTGCTGGGGAAGGAGCATTTCAGAGTTCTCTCAGAACTGGAATATAAAGCATGGATGGAAGAATTTAAGAATGACATGCTAACTGAGAAAGACCCTCGATACCTGACTGTTAAAGAAGTGGTCTGTCATCTCGTTGAATGCAATAAGGATATCCCAGAAATCTCTGAGATCAATTGGGTTATTCATGTGGTTGATTCCCCGACTATTATAAATGCCTTTGTGCTTCCTAATGGACAAGTGTTTGTTTTCACGGGGCTTTTAAATAGTGTAACTGATATTCATCAGCTTTCCTTCCTTCTGGGCCATGAAATAGCACATGCTATACTTGGGCATGCTGCAGAAAAGGCTAGCGTGGCTCATTTATTGGATTTCCTAGGTATGATTTTTCTCACAATGATTTGGGCCGTTTGTCCACGAGATAGTTTGGCAGTTTTGGGCCAGTGGGTACAGTCTAAATTGCAAGAGTATATGTTTGATAGACCATACAGTAGAACATTGGAAACTGAAGCAGATAAAATTGGACTACAGCTTGCTGCGAAGGCTTGTGTGGATGTAAGAGCCAGTTCAGTGTTTTGGCAGCAGATGGAGTTTACAGACATCCTACATGGTCATCCCAAGTTGCCAGAGTGGTTATCTACACACCCTTCTCATGGAAACCGAGCTGAGCACTTGGATAGACTTATACCAGAGGCTGTGAAAATCAGAGAGGTCTGTAATTGCCCACCACTTTCTGGACCAGATCCTCGATTACTATTCAAACTTAGCATGAAGAATTTTTGTCAAGAATTGGAAAAAGACCAAAATACCACTTTTAAGAAACAGAAAATGGATCCTCTTCCCACTCAAAAACAGGAGCAAATACCATTAACATACATAGTAGAGAAGCAAACTGGGAGTTGA

Related Sequences

XP_004869671.1 Protein

Oma1 PREDICTED: metalloendopeptidase OMA1, mitochondrial isoform X4 [Heterocephalus glaber]

Length: 521 aa      View alignments
>XP_004869671.1
MSFIYGLQSTRNSFLFRFNLLGSWRKRNSLAVTSAGCHQFQNFYVVNKYQGLTSFTQCDRLTFLHGNFHFNRTLNNRRPGCLSSAKSRGIWVITHKCTSFSRWVLTRESAVAPALAAWCPETYSPARSARNFHTSPRVQAAPVPLLLVLLKPLQKLLAIIVGRGIRKWWQALPPNKKELFRESVRRNKWKLFLGLSTCGLLFVVFYFTHLEVSPITGRKKLLLLGKEHFRVLSELEYKAWMEEFKNDMLTEKDPRYLTVKEVVCHLVECNKDIPEISEINWVIHVVDSPTIINAFVLPNGQVFVFTGLLNSVTDIHQLSFLLGHEIAHAILGHAAEKASVAHLLDFLGMIFLTMIWAVCPRDSLAVLGQWVQSKLQEYMFDRPYSRTLETEADKIGLQLAAKACVDVRASSVFWQQMEFTDILHGHPKLPEWLSTHPSHGNRAEHLDRLIPEAVKIREVCNCPPLSGPDPRLLFKLSMKNFCQELEKDQNTTFKKQKMDPLPTQKQEQIPLTYIVEKQTGS