Sequence details NCBI ID: XM_004869567.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Arhgef10
Gene Name Rho guanine nucleotide exchange factor (GEF) 10, transcript variant X1
Entrez Gene ID 101704100

Database interlinks

Part of NW_004624861.1 (Scaffold)

For more information consult the page for NW_004624861.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARHGEF10 ENSCPOG00000022520 (Guinea pig)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 10

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000021089, Guinea pig)

Protein Percentage 84.72%
CDS Percentage 85.52%
Ka/Ks Ratio 0.17942 (Ka = 0.0893, Ks = 0.4976)

ARHGEF10 ENSG00000104728 (Human)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 10

External Links

Gene Match (Ensembl Protein ID: ENSP00000340297, Human)

Protein Percentage 80.03%
CDS Percentage 80.38%
Ka/Ks Ratio 0.12888 (Ka = 0.1127, Ks = 0.8748)

Arhgef10 ENSMUSG00000071176 (Mouse)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 10

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000081225, Mouse)

Protein Percentage 79.08%
CDS Percentage 79.35%
Ka/Ks Ratio 0.12567 (Ka = 0.1223, Ks = 0.9732)

RGD1565043 ENSRNOG00000012561 (Rat)

Gene Details

Protein RGD1565043

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064046, Rat)

Protein Percentage 78.28%
CDS Percentage 79.23%
Ka/Ks Ratio 0.12329 (Ka = 0.1244, Ks = 1.0094)

Genome Location

Sequence Coding sequence

Length: 4056 bp    Location: 992834..1083043   Strand: +
Raw sequence   
>XM_004869567.1
ATGGACCCGGGAGAGGCACCTCGGCTCACCGCAGCTCCTGCAGAAAACGAAGTGAAATATGACACCAGTAACAAAGAGGCTGAAGAGGGAGAGCAGTTCGACTTTGACAGTGGGGATGAAGTCCCTGAAGCAGACCGCCAAGCCCCGCCCCAGCCGGGCGCCTGGGGTGCAGGAGGGGGTGCAGCCCAGGGTCCTGCCAGCGCATCCCCCGAGGAGGGAGGTGACAAGGGACCCGGAGCAGAAGCCTTCGAAGTGGCAGAACCTGCCAAGCTCTTGGTCCCAAAGGTGAACCCGTACTCTGTCATCGACATCACGCCCCTGCAGGAGGATGCACTGCCACCCCCAGACCCAGCCACTGAGGAGGACGGTGTGGGTCCGCACGTGCCCAGCGGGTATTTGGTGCCGGTTCCCTGTGGCTACGCTGTCCCCTCCAGCCTGCCCATGCTGCTGCCTGCCTACTCAAGCCCTGTCATCATCCGCACCGAGTCTGTGGATGAGGAAGAAGCCCCGGAAGTTGTGGGTGACCACCAGTCCCACTCCCTGAGCTCCGAGGACCCTCTGCTCAGCGGTGATCAAAGCAGCAGGGAAGACAGCGCCCTTGCGCGGTGGGCTGTGGACCCGGCCAACACAGCGTGGATGGAAAACCCGGAAGAAGCCATTTATGACGATGTCCCCAGGGAAAACTCAGACTCCGAGCCAGATGGAATGCTTTATGATGACGTTGAGAATGGAGAGCAAGGTGGAAACAGCTCTGTGGAGTATGGGTGGAGCTCCAGTGAATTTGAGAGCTACGAAGAGCAGAGTGACTCGGAGTGCAGGAGCGGCGTTCCCCGGCCCTTCCTGCGCAGCAGCCACAGGAAGCAACTCTCTCATGACCTAAGCCGCTTAAAGGCACGCTGTGAGGAAAGCATGAGAGACTTGGTGGCCAGCACAGTGCGAGCCATGGGGGTGCAGCAGCTAACGTGCAGGCAGGAGTGCAAGATGCAGAAGCTCATGAAGGCGGCCAAGGAGGGCACCAGGGACGGGCTGGAGCGCACCAAGGCCGCCGTGAAGAGGGGCCGCTCCTTCATCAGGACCAAGTCCTTCGTCTCCCCAGACCACAGATCCTGTCTGGAAGAGGAGCAGAGCTTGTTCATTGACGTGGACTGCAGGCACCCGGAGGCAGTGTTGACGCCGATGCCTGAGGGACTGTCTCAGCAGCAGGTTGTAAGAAGATATATTCTGGGTTCCATTGTTGAAAGTGAAAAAAACTACGTAGATGCTCTTAAGAGGATTTTGGAGCAATACGAGAAGCCGCTGTCTGAGATGGAGCCCCGGGTCCTGAGTGAGAGGAAGCTGAAGATGGTGTTCTACCGTGTCAAGGAGATCTTGCAGTGCCACTCCATGTTCCAGATCGCACTGGCCAGCCGTGTGGCTGAGTGGGACGCCGTGGAAACCATCGGCGATGTCTTCGTGGCTTCGTTTTCCAAGTCCATGGTGCTGGATGCGTACAGTGAGTATGTGAACAACTTCGGCACCGCAGTGGCCATCCTCAAGAAGACGTGTGCCACAAAGCCCACTTTTCTCGAGTTTTTAAAGCAGAGCCAGGAGGCGAGTCCCGACCGTGTCACGCTCTGCAGCCTGATGATGAAGCCCATCCAGCGATTCCCGCAGTTCATCCTCCTGCTCCAGGACATGCTGAAGAACACCCCCCGAGGACACCCCGACAGGCTGCCCCTTCAGATGGCGCTGACAGAGCTGGAAACCTTGGCAGAGAAGTTAAACGAAAGGAAAAGAGATGCCGATCAGCGCTGTGAAATCAAACACATCGCAAAAGCCATCAACGAAAGATACCTAAACAAGCTCCTCTGCAGCGGGAGCCGACGCCTCATCCGCTCTGACGACGTGATAGAGACAGTGTACAACGACAAGGGCGAGATCACCAAGACCAAGGAGCGCCGGCTGCTCATGCTGAACGACGTGCTCATGTGCGCCACCGTCAGCTTCCGCCCCTCACAGGAGAGCCACGTGGGAGCCAGCCAGCGGTACCTGCTCAAGTGGAGTGTTCCCCTGGGCCACGTGGAAGTGATGGAGTACAGCAATGGCCCCGGCATAGGGGAGCACAGCCGGCACCCCGCCGTGCACCCGCCTGAGAGCCTGGCTGTGTCTGCTAACGCCAAGCCATACAAAACTTACCTGGGGCCGGGACAGCTTTACCACGATCTGCAGAACCTGCTACATGACCTGAACGTCGTTGGCCAGATCGCCCAGCTGATAGGGAGCCTCAGAGGGAACTACCAGAACTTAAACCAGTCGGTAGCCCATGACTGGACCTCAGGCTTACAGAGCCTGATTTTGAAGAAAGAAGATGAAATCAGAGCTGCCGACCGCTGCAGAATTCAGTTACAGCTGCCTGGGAAGCAGGACAAGTCTGGGCGGCCTACTTTCTTCACAGCCGTGTTCAACACATTCACCCCTGCCATCAAAGAGGCCTGGACCAGCAACCTGCAGATGGCCAAGCTCGCCCTGGAGGAGGACAACCATCTGGGCTGGTTCTGTGTGGACGACGATGGGAGTCAGACCAAGAGGGACACGCACCCGCTCCTGGTGGGACACATGCCTGTGATGGTGGCCAGGCAGCCGGAGTTCAAGATCGAATGTGCTGCTTATAACCCCGAGCCTTACCTAAATAATGAAAGCCAACGAGATTCGCTCTCCATGGCGCGCGGCTTCCTGTGGATCGGAAGTTGTAGCAGCCAGATGGGTCAGATTGCCATCATCTCCTTCCAAAACTCCAGCCCCAAAGTCATTGAGTGCTTCAACGTGGAGTCGCGCATCCTGTGCATGGTGTACGTGCCCGTCCAGGAGCAGCACCGAGAGCCCAGCGCAGCCTCAGACCCCGAGCCCCTGACCACCCGCACTTCCGACGTGCCCACCATCTGCCTGGGCACGGAGGAAGGAAGCATTTCCGTTTATAAAAGCAGCCAAGGCTCAAAGAAAGTGAGGCTGCAGCACTTCTTCAGCCCTGAGAAGTCCACGGTCGTGAGCCTCGCCTCCTCGCCGCGCGGCCTGCACGCTGGCCTGGTCAACGGCTCGGTGGCCAGCTACGCCAAGGCCGCAGATGGATCCTGGAATGTGGAACCACAGAAAGTCATAGACTTAGGCGTCCTTCCAGTCAGGAGCCTCCTGGTGATGGAGGACACTTTGTGGGCGGCATCTGGAGGCCAAGTGTTCATCATCGGCACCGAGACGCATGCTGTCCAGAGCCAGCTGGAGGCCCACCAGGAGGAAGGCATGGTCATCTCGCACATGGCTGTGGCTGGTGTCGGGCTCTGGGTTGCCTTCACTACCGGGTCCACCCTCCGCCTCTTCCACACGGAAACGCTGAAGCACCTGCAGGATGTCAACATCGCTGCCCCTGTGCACGGCATGCTGCCAGGCCACCAGCGACTCTCTGTGACCAGCCTGCTCGTGTGCCACGGCTTGCTGATGGTGGGCACAAGCCTGGGCCTTGTCGTGGCCCTGCCAGTCCCTCGTCTGCAGGGAATCCCTAAGGTGACTGGAAGAGGCATGGTCTCCTACCACGCACACAGTGGCCCCGTCAAGTTCATTGTTCTGGCCACCGCCTCGCCTAAGGACAAGGACAAGGCCAGGGACAGTCCGCCTCCCGGCCCTGAGCCCCCAGACGAAGAGCAGAAGGATGAGCCCTCCGGGGACAGGGCCACCTCATGCCCTGGCCAGGGGGACCTCACCACGGCCATTTGGTTGGGGGACTGGCCGGGGCCGGGGCTGCAGAAGAGTGACCTGTCGTCCTCGTCAGGGTCGCTGAGCCTGTCCCACGGCTCCAACTCGCTGGAGCTCAGAGCTGAGGACAGCAGCATGTGTGACTTCCTGAGGGACCCTGCCGGCCCCGTCCGGGGCAGGGCACGGCCGTCACGCAGGGCCAAGGCCAGCTCAGCGCTGGTGGTATGTGGAGGCCAGGGCCACCGGCGCATGCACAGGAAGGCACGGGCACCGCCCCCCGAGGAGCTGCTGTCTTCCGTGATGGTCTGGCAGATCCCGCTGCTGAGTGCATAG

Related Sequences

XP_004869624.1 Protein

Arhgef10 PREDICTED: rho guanine nucleotide exchange factor 10 isoform X1 [Heterocephalus glaber]

Length: 1351 aa      View alignments
>XP_004869624.1
MDPGEAPRLTAAPAENEVKYDTSNKEAEEGEQFDFDSGDEVPEADRQAPPQPGAWGAGGGAAQGPASASPEEGGDKGPGAEAFEVAEPAKLLVPKVNPYSVIDITPLQEDALPPPDPATEEDGVGPHVPSGYLVPVPCGYAVPSSLPMLLPAYSSPVIIRTESVDEEEAPEVVGDHQSHSLSSEDPLLSGDQSSREDSALARWAVDPANTAWMENPEEAIYDDVPRENSDSEPDGMLYDDVENGEQGGNSSVEYGWSSSEFESYEEQSDSECRSGVPRPFLRSSHRKQLSHDLSRLKARCEESMRDLVASTVRAMGVQQLTCRQECKMQKLMKAAKEGTRDGLERTKAAVKRGRSFIRTKSFVSPDHRSCLEEEQSLFIDVDCRHPEAVLTPMPEGLSQQQVVRRYILGSIVESEKNYVDALKRILEQYEKPLSEMEPRVLSERKLKMVFYRVKEILQCHSMFQIALASRVAEWDAVETIGDVFVASFSKSMVLDAYSEYVNNFGTAVAILKKTCATKPTFLEFLKQSQEASPDRVTLCSLMMKPIQRFPQFILLLQDMLKNTPRGHPDRLPLQMALTELETLAEKLNERKRDADQRCEIKHIAKAINERYLNKLLCSGSRRLIRSDDVIETVYNDKGEITKTKERRLLMLNDVLMCATVSFRPSQESHVGASQRYLLKWSVPLGHVEVMEYSNGPGIGEHSRHPAVHPPESLAVSANAKPYKTYLGPGQLYHDLQNLLHDLNVVGQIAQLIGSLRGNYQNLNQSVAHDWTSGLQSLILKKEDEIRAADRCRIQLQLPGKQDKSGRPTFFTAVFNTFTPAIKEAWTSNLQMAKLALEEDNHLGWFCVDDDGSQTKRDTHPLLVGHMPVMVARQPEFKIECAAYNPEPYLNNESQRDSLSMARGFLWIGSCSSQMGQIAIISFQNSSPKVIECFNVESRILCMVYVPVQEQHREPSAASDPEPLTTRTSDVPTICLGTEEGSISVYKSSQGSKKVRLQHFFSPEKSTVVSLASSPRGLHAGLVNGSVASYAKAADGSWNVEPQKVIDLGVLPVRSLLVMEDTLWAASGGQVFIIGTETHAVQSQLEAHQEEGMVISHMAVAGVGLWVAFTTGSTLRLFHTETLKHLQDVNIAAPVHGMLPGHQRLSVTSLLVCHGLLMVGTSLGLVVALPVPRLQGIPKVTGRGMVSYHAHSGPVKFIVLATASPKDKDKARDSPPPGPEPPDEEQKDEPSGDRATSCPGQGDLTTAIWLGDWPGPGLQKSDLSSSSGSLSLSHGSNSLELRAEDSSMCDFLRDPAGPVRGRARPSRRAKASSALVVCGGQGHRRMHRKARAPPPEELLSSVMVWQIPLLSA