Details from NCBI annotation

Gene Symbol Cln8
Gene Name ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation), transcript variant X6
Entrez Gene ID 101702192

Database interlinks

Part of NW_004624861.1 (Scaffold)

For more information consult the page for NW_004624861.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLN8 ENSCPOG00000025996 (Guinea pig)

Gene Details

ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016102, Guinea pig)

Protein Percentage 90.28%
CDS Percentage 89.35%
Ka/Ks Ratio 0.10337 (Ka = 0.0489, Ks = 0.4734)

CLN8 ENSG00000182372 (Human)

Gene Details

ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)

External Links

Gene Match (Ensembl Protein ID: ENSP00000328182, Human)

Protein Percentage 85.66%
CDS Percentage 83.8%
Ka/Ks Ratio 0.09793 (Ka = 0.0791, Ks = 0.8077)

Cln8 ENSMUSG00000026317 (Mouse)

Gene Details

ceroid-lipofuscinosis, neuronal 8

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027554, Mouse)

Protein Percentage 84.38%
CDS Percentage 83.1%
Ka/Ks Ratio 0.10649 (Ka = 0.0947, Ks = 0.8895)

Cln8 ENSRNOG00000012565 (Rat)

Gene Details

ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) (Cln8), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016756, Rat)

Protein Percentage 82.64%
CDS Percentage 83.33%
Ka/Ks Ratio 0.11737 (Ka = 0.0985, Ks = 0.8391)

Genome Location

Sequence Coding sequence

Length: 867 bp    Location: 969638..977292   Strand: +
>XM_004869566.1
ATGACTTCTGACAGCGATGGGGGCAGCTCCCAGGGCATTTTTGACCTGGACTATGTGTCCTGGAAGATCCGCTCCACGCTGGTGGTCGCGGGCTTTGTCTTCTACCTGGGCGTCTTTGTAGTCTGCCACCAGCTCTCGTCCTCTCTGAACGCCACCTACCGCTCCCTGGTGGCCAGAGAGAAGGTCTTCTGGGACCTGGCGGCCACACGTGCCGTCTTTGGGGTCCAGAGCACATTTGCGGGGCTGTGGGCACTGCTGGGGGACCCCGTGCTTCAAGCCGACAAGGCGCTTGGCCAGCAGAACTGGTGCTGGTTCCATGTCACCACAGCCACCGGATTCTTCTTCTTTGAGAATGTGGCCGTGTACCTGTCCAGCCTGTTCTTCCGGACTTTCGACCTCTTCTTGGTTGTCCACCACCTCTTTGCCTTTTTGGGATTTCTTGGCTCGGCAGTCAACCTCAGAGCTGGCCACTACCTAGCCATGATCACACTGCTCCTGGAGATGAGCACCCCATTTACCTGCATCTCCTGGATGCTCCTGAAGGCTGGCTGGTCCTCCACGCTGCTTTGGAAGGCCAACCAGTGGCTGATGATCCACATGTTCCACTGCCGCATGGTCCTCACCTACCACATGTGGTGGGTGTGCTTCTGGTACTGGGACGGCCTGCTCAGCAGCCTGTACCTGCCCCACTTTGCTCTGTTCCTCGTCGGGCTGGCCCTGCTCACGCTGGTCATGAATCCATACTGGACCCACAAGAAGACCCAGCAGCTCCTCAGTCCCGTAGATTGGAACTTCGCACAGCCGGAAACGAAGAACAGCCGTCCAGACAGGCCCGGTGGCCATGTGCTGCAGAAGAAGAGGCCGTAG

Related Sequences

XP_004869623.1 Protein

Cln8 PREDICTED: protein CLN8 isoform X6 [Heterocephalus glaber]

Length: 288 aa      View alignments
>XP_004869623.1
MTSDSDGGSSQGIFDLDYVSWKIRSTLVVAGFVFYLGVFVVCHQLSSSLNATYRSLVAREKVFWDLAATRAVFGVQSTFAGLWALLGDPVLQADKALGQQNWCWFHVTTATGFFFFENVAVYLSSLFFRTFDLFLVVHHLFAFLGFLGSAVNLRAGHYLAMITLLLEMSTPFTCISWMLLKAGWSSTLLWKANQWLMIHMFHCRMVLTYHMWWVCFWYWDGLLSSLYLPHFALFLVGLALLTLVMNPYWTHKKTQQLLSPVDWNFAQPETKNSRPDRPGGHVLQKKRP