Sequence details NCBI ID: XM_004869517.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Apobec1
Gene Name apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
Entrez Gene ID 101708425

Database interlinks

Part of NW_004624860.1 (Scaffold)

For more information consult the page for NW_004624860.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000026025 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014328, Guinea pig)

Protein Percentage 70.76%
CDS Percentage 79.94%
Ka/Ks Ratio 0.36101 (Ka = 0.1779, Ks = 0.4927)

Genome Location

Sequence Coding sequence

Length: 711 bp    Location: 4957236..4938001   Strand: -
Raw sequence   
>XM_004869517.1
ATGACTTCCGGGCAAGGTCCTTCAGCAGGAGACCCCACTCTGAGGAGGAGGATCGAGCCCTGGCAGTTCGAGGCCTCCTTCGACCCCCGGCAGCTGCGGAGAGAGACCTGTCTGCTGTCCGAGGTGCAGTGGGGCACGAGCCCCAGGGCCTGGCGGGGGTGCAGCCTGAACACAGCCCGGCACGCGGAGGTGAGCTTCATGGACAGGCTCACCTCGGAGGGGCGCCTGCGCGGCCCCGTCCGCTGCTCCATCACCTGGTTCCTGTCCTGGAGCCCCTGCGGGGCCTGCGCCCAGGCCATCGGGGAGTTTTTGAGGCAGCACCCGAACGTGAGTCTCGTCATTTACATCGCACGGCTTTTCTGGCACGTGGATGAGCAGAACCGGCAAGGACTCCGGGACCTGGTGACCCGTGGCGTGCGCATGCAGGTCATGAGCGACCCAGAGTTCGCCCACTGCTGGAGGAATTTCGTGAACTACTCGCCAGGGCAGGAGGCGCGCTGGCCCCAGGTGCCGCCCGTGTGGACCTGGCTGTACTCGCTGGAGCTGCACTGCATCCTGCTCAATCTTCCACCCTGTTTAAAGATTTCAAGAAGACATCACAATCAGCTTACATTTTTCCAACTTATTCTTCAAAATTGCCATTACCAAGCAATTCCGTCCCCTGTCCTTTTAGCCTCGGGGTTGATACATCCTTTTGTGACCTGGGCTTGA

Related Sequences

XP_004869574.1 Protein

Apobec1 PREDICTED: c-_U-editing enzyme APOBEC-1-like [Heterocephalus glaber]

Length: 236 aa      
>XP_004869574.1
MTSGQGPSAGDPTLRRRIEPWQFEASFDPRQLRRETCLLSEVQWGTSPRAWRGCSLNTARHAEVSFMDRLTSEGRLRGPVRCSITWFLSWSPCGACAQAIGEFLRQHPNVSLVIYIARLFWHVDEQNRQGLRDLVTRGVRMQVMSDPEFAHCWRNFVNYSPGQEARWPQVPPVWTWLYSLELHCILLNLPPCLKISRRHHNQLTFFQLILQNCHYQAIPSPVLLASGLIHPFVTWA