Sequence details NCBI ID: XM_004869492.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pex5
Gene Name peroxisomal biogenesis factor 5, transcript variant X3
Entrez Gene ID 101700051

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624860.1 (Scaffold)

For more information consult the page for NW_004624860.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

Pex5 ENSCPOG00000004889 (Guinea pig)

Gene Details

Cavia porcellus peroxisomal biogenesis factor 5 (Pex5), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019431, Guinea pig)

Protein Percentage 93.08%
CDS Percentage 90.51%
Ka/Ks Ratio 0.12366 (Ka = 0.0404, Ks = 0.3265)

PEX5 ENSG00000139197 (Human)

Gene Details

peroxisomal biogenesis factor 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000407401, Human)

Protein Percentage 94.0%
CDS Percentage 90.24%
Ka/Ks Ratio 0.10073 (Ka = 0.0358, Ks = 0.3551)

Genome Location

Sequence Coding sequence

Length: 1605 bp    Location: 3771949..3787740   Strand: +
Raw sequence   
>XM_004869492.1
ATGGCAATGCGGGAGCTGGTGGAGGGCGAATGTGGGGGTGCCAACCCCCTCATGAAGCTGGCCGGCCACTTCACCCAGGACAAGGCCCTTCGGCAGGAGGGACTGCGGCCTGGGCCCTGGCCCCCGGGAGCCCCTGCCTCTGAGACCGTCTCCAAGCCTTTGGGAGCAGCCTCTGAAGATGAGTTGGTGGCTGAATTCCTGCAGGATCCGAATGCACCACTTGTGTCCCGTGCCCCTCAGACCTTTAAGATGGATGATCTCCTGGCCGAGATGCAGGAGATTGAACAGTCCAGCTTCCGCCAGGCTCCCCAGAGAGCCCCTGGTGTGGCAGACTTGGCCTTGTCTGAGAACTGGGCCCAGGAGTTTCTTGCAGCTGGAGATGCTGTGGATGTGACTCAGGATTATAATGAGACTGACTGGTCCCAGGAATTCATCGCTGAAGTTACAGACCCCTTGTCTGTGTCGCCGGCCCGCTGGGCTGAGGAGTATCTGGAGCAGTCCGAGGAGAAGCTGTGGCTGGGAGAGCCTGAGGGAGCAGCCACCGCGGATCACTGGAATGATGAATATCACCCTGAGGAGGATCTACAGCACACGGCCAGCGACTTTGTGGCCAAGGTTGATGACCCCAAATTGGCTAACTCTGAGTTCCTGAAATTCGTGCGGCAGATTGGCGAGGGCCAGGTGTCCCTGGAGTCCGTTGCAGGGTCGGGCCGAGCTCAGGCAGAACAGTGGGCAGCAGAGTTTATACAGCAGCAGGGTACTTCAGATGCCTGGGTTGACCAGTTCACAAGGCCGGTAAACAGATCTGCCCTTGACATGGAGTTTGAGCGAGCCAAATCTGCTATCGAGTCTGATGTTGATTTCTGGGACAAGTTGCAGGCTGAGTTGGAGGAGATGGCAAAGCGAGATGCTGAGGCTCATCCGTGGCTCTCTGACTACGATGACCTCACATCTGCTTCCTATGATAAGGGTTACCAGTTTGAGGAGGACAATCCCCTGCGTGATCACACTCAGCCTTTCGAAGAAGGGCTACGGCGACTTCAGGAGGGGGACCTGCCAAATGCTGTGTTGCTGTTTGAGGCAGCTGTGCAGCAGGATCCTAAGCACATGGAAGCTTGGCAGTACCTGGGCACCACCCAGGCGGAGAACGAGCAAGAACTCTTAGCCATCAGTGCACTGAGGAGGTGTCTGGAGCTGAAGCCAGACAACCGGATGGCGCTGATGGCGCTGGCTGTGAGCTTCACGAATGAGTCCCTGCAGCGACAGGCCTGTGAGACGCTGCGGGACTGGCTGTGCTGCACCCCAGCCTATGCCCACCTGGTGGTGCCCAGGGAAGAAGGGGCTGGAGGGGCAGGACTGGGCTCTGGCAAGCGGATCTTGGGGTCTCTGTTGTCTGACTCCCTGTTTCTTGAGGTAAAAGAGCTCTTCCTGGCTGCTGTGCGCCTGGACCCGACATCCATCGACGCGGATGTGCAGTGTGGCTTGGGGGTCCTCTTCAACCTGAGTGGGGAATATGACAAGGCCGTGGACTGCTTCACAGCTGCCCTCAGTGTTCGTCCCAATCCCTTCTCTATCCCTATGCCAGGACTATTTGCTGTGGAATAA

Related Sequences

XP_004869549.1 Protein

Pex5 PREDICTED: peroxisomal targeting signal 1 receptor isoform X3 [Heterocephalus glaber]

Length: 534 aa      
>XP_004869549.1
MAMRELVEGECGGANPLMKLAGHFTQDKALRQEGLRPGPWPPGAPASETVSKPLGAASEDELVAEFLQDPNAPLVSRAPQTFKMDDLLAEMQEIEQSSFRQAPQRAPGVADLALSENWAQEFLAAGDAVDVTQDYNETDWSQEFIAEVTDPLSVSPARWAEEYLEQSEEKLWLGEPEGAATADHWNDEYHPEEDLQHTASDFVAKVDDPKLANSEFLKFVRQIGEGQVSLESVAGSGRAQAEQWAAEFIQQQGTSDAWVDQFTRPVNRSALDMEFERAKSAIESDVDFWDKLQAELEEMAKRDAEAHPWLSDYDDLTSASYDKGYQFEEDNPLRDHTQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNRMALMALAVSFTNESLQRQACETLRDWLCCTPAYAHLVVPREEGAGGAGLGSGKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDADVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNPFSIPMPGLFAVE