Details from NCBI annotation

Gene Symbol Clstn3
Gene Name calsyntenin 3, transcript variant X2
Entrez Gene ID 101698357

Database interlinks

Part of NW_004624860.1 (Scaffold)

For more information consult the page for NW_004624860.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLSTN3 ENSCPOG00000008129 (Guinea pig)

Gene Details

calsyntenin 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007310, Guinea pig)

Protein Percentage 96.25%
CDS Percentage 92.49%
Ka/Ks Ratio 0.05289 (Ka = 0.0179, Ks = 0.3389)

CLSTN3 ENSG00000139182 (Human)

Gene Details

calsyntenin 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000266546, Human)

Protein Percentage 95.08%
CDS Percentage 91.11%
Ka/Ks Ratio 0.05348 (Ka = 0.0238, Ks = 0.445)

Clstn3 ENSMUSG00000008153 (Mouse)

Gene Details

calsyntenin 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000008297, Mouse)

Protein Percentage 94.77%
CDS Percentage 88.56%
Ka/Ks Ratio 0.04118 (Ka = 0.0261, Ks = 0.6348)

Clstn3 ENSRNOG00000011156 (Rat)

Gene Details

calsyntenin 3 (Clstn3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015570, Rat)

Protein Percentage 94.78%
CDS Percentage 88.44%
Ka/Ks Ratio 0.03895 (Ka = 0.0259, Ks = 0.6639)

Genome Location

Sequence Coding sequence

Length: 2880 bp    Location: 3709139..3737778   Strand: +
>XM_004869485.1
ATGACCCTGCTGCTGCTGCCCCTGATGCTGGCCTCGCTGTTCCCACCCAGCTGCGGCAACAAAGCTAACAAGCACAAGCCGTGGATCGAGGCTGAGTACCAGGGCATTGTCATGGAGAACGACAACACGGTCCTGCTGAACCCGCCGCTCTTTGCCTTGGACAAGGATGCCCCCCTGCGCTATGCAGGGGAGATCTGTGGCTTCCGGCTCCACGGGTCTGGGGTGCCCTTCGAGGCTGTGATCCTGGACAAGGCGACTGGAGAGGGGCTGATCCGGGCCAAGGAGCCGGTGGACTGCGAGGCCCAGAAGGAGCACAGCTTCACCATCCAGGCCTACGACTGCGGCGAGGGCCCAGATGGGGTCAACACCAAGAAGTCCCACAAGGCGACTGTGCATGTGCGGGTCAACGACGTGAACGAGTTTGCCCCAGTGTTTGTGGAGCGGCTATACCGCGCTGCTGTGACTGAGGGGAAGCTCTACGATCGCATCCTGCGGGTGGAAGCCATCGATGGCGACTGCTCCCCCCAGTACAGCCAGATCTGCTATTACGAGATCCTCACTCCCAACACCCCTTTCCTCATTGACAACGACGGGAACATTGAGAACACAGAGAAACTGCAGTACAGTGGCGAGAAGCTCTACAAGTTCACGGTGACAGCTTACGACTGTGGGAAGAAGCGGGCGGCAGATGATGCCGAGGTGCAGATCCAGGTGAAGCCCACCTGTAAGCCTAGCTGGCAAGGCTGGAACAAAAGGATCGAATATGCCCCCGGCGCCGGGAGCTTGGCTTTGTTCCCTGGTATCCGCCTGGAGACTTGCGATGAGCCGCTCTGGAACATTCAGGCCACCATAGAGCTGCAGACCAGCCACGTGGCCAAGGGCTGTGACCGAGATAACTATTCAGAGCGGGCCCTGCGGAAGCTCTGCGGTGCGTCCCCTGGGGAGGTGGACCTGCTGCCCATGCCAGGCCCCAATGCCAACTGGACAGCGGGACTCTCGGTGCACTACAGCCAGGACAGCAGCCTCATCTACTGGTTCAATGGCACCCAGGCGGTGCAGGTGCCCCCGGGAGGCACAGCTGGGCTGGGCACTGGACCCCAGGACAGCCTCAGCGACCACTTTACCCTGTCCTTCTGGATGAAGCACGGTGCGACTCCCAACAAGAAGGAAGGCAAGAAGGAAGAGGAAACCATCGTGTGTAACACAGTCCAGAACGAGGATGGCTTCTCTCACTACTCACTGACTGTCCATGGCTGCAGAATTGCCTTCCTCTACTGGCCTCTGCTCGAGAGCGCCCGGCCCGTCAAGTTCCTCTGGAAGCTGGAGCAGGTCTGTGATGATGAGTGGCATCACTATGCTCTGAATCTGGAGTTCCCCACGGTCACACTCTACGCTGATGGCATCTCCTTCGACCCTGCCCTCATCCATGACAACGGCCTCATCCACCCACCCCGGAGGGAGCCCGTCCTCATGATAGGGGCCTGCTGGACTGAGGAGAAGAACAAAGAGAAGGAAAAGGGAGGAGACAACAGTACAGACACCACCCGAGGAGACCCCTTGCCGATCCACCACTACTTCCATGGCTACCTGGCTGGTTTCAGCGTGCGCTCAGGTCGCCTGGAGAGCCGCGAGGTCATCGAGTGCCTCTATGCATGCCGGGAGGGGCTGGACTATAGGGATTTCGAGAGCCTGGGCAAAGGCATGAAGGTCCACGTGAACCCCTCACAGTCCCTGCTCACCCTGGAGGGGGATGATGTGGAGACCTTCAACCACGCCCTGCAGCATGTGGCTTACATGAACAGTCTGCGCTTTGCTACGCCCGGCGTCAGGCCCCTGCGCCTCACCACTGCCGTCAAGTGTTTCAGCGAAGAGTCCTGTGTGTCCATCCCCGAAGTGGAGGGCTATGTGGTGGTTCTTCAGCCTGATGCTCCCCAGATCCTGCTAAGCGGCACTGCCCATTTTGCCCGCCCTGCTGTGGACTTTGAGGGACCCGAAGGTGTCCCTCTGTTCCCTGATCTTCAGATCACTTGCTCCATTTCTCACCAAGTGGAGGCCAAAAAGGATGAAAGTTGGCAGGGGACAGTGACGGACACACGCATGTCAGATGAGATTGTGCACAACCTTGATGGTTGTGAAGTTTCTCTGGTGGGAGACGACCTGGACCCCGAGAAGGAAAGCCTGCTCCTGGACATGACATCCGTGCAGCAGCGAGGGCTGGAGCTCACCAACACATCTGCCTACCTCACCATCGCTGGTGTGGAGAGCATCACCGTGTATGAGGAGATCCTGAGGCAGGCTCATTATCAGCTGCGACATGGAGCCGCCCTCTATGCCAGGAAGTTCCGGCTGTCCTGCTCAGAAATGAACGGCCGCTATTCCAGCAATGAATTCATTGTGGAGGTCAACGTGTTGCACAGTGTGAACCGGGTGGCACATCCCAGTCACGTGCTCAGCTCCCAGCAGTTCCTGCACCGAGGTCACCAGCCCCCTCCCGAGATGGCTGGGCACAGCCTGGCCAGCTCCCACCGGAACTCCATGGTCCCCAGTGCCGCAACCCTCATCATCGTGGTGTGTGTGGGCTTCCTGGTACTCATGGTCATCCTGGGCCTTGTGCGCATCCATTCCCTTCACCGCCGGGTCTCAGGGCTCAGTGGGCCCCCGGGGGCCTCCAGTGACCCCAAAGACCCGGACCTCTTCTGGGATGACTCTGCTCTCACCATCATTGTGAACCCGATGGAGTCCTACCAGAGTCGGCAGGCCTGTGTAGTAGGGGCAGCCGGGAGCCAGCAGGAGGACGAGGACAGCAGCGACTCAGAGGCAGCCAACTCCCCGAGCAGCGATGAGAGACGCATCATTGAGAGCCCCGCACAGCGCTACTGA

Related Sequences

XP_004869542.1 Protein

Clstn3 PREDICTED: calsyntenin-3 isoform X2 [Heterocephalus glaber]

Length: 959 aa      View alignments
>XP_004869542.1
MTLLLLPLMLASLFPPSCGNKANKHKPWIEAEYQGIVMENDNTVLLNPPLFALDKDAPLRYAGEICGFRLHGSGVPFEAVILDKATGEGLIRAKEPVDCEAQKEHSFTIQAYDCGEGPDGVNTKKSHKATVHVRVNDVNEFAPVFVERLYRAAVTEGKLYDRILRVEAIDGDCSPQYSQICYYEILTPNTPFLIDNDGNIENTEKLQYSGEKLYKFTVTAYDCGKKRAADDAEVQIQVKPTCKPSWQGWNKRIEYAPGAGSLALFPGIRLETCDEPLWNIQATIELQTSHVAKGCDRDNYSERALRKLCGASPGEVDLLPMPGPNANWTAGLSVHYSQDSSLIYWFNGTQAVQVPPGGTAGLGTGPQDSLSDHFTLSFWMKHGATPNKKEGKKEEETIVCNTVQNEDGFSHYSLTVHGCRIAFLYWPLLESARPVKFLWKLEQVCDDEWHHYALNLEFPTVTLYADGISFDPALIHDNGLIHPPRREPVLMIGACWTEEKNKEKEKGGDNSTDTTRGDPLPIHHYFHGYLAGFSVRSGRLESREVIECLYACREGLDYRDFESLGKGMKVHVNPSQSLLTLEGDDVETFNHALQHVAYMNSLRFATPGVRPLRLTTAVKCFSEESCVSIPEVEGYVVVLQPDAPQILLSGTAHFARPAVDFEGPEGVPLFPDLQITCSISHQVEAKKDESWQGTVTDTRMSDEIVHNLDGCEVSLVGDDLDPEKESLLLDMTSVQQRGLELTNTSAYLTIAGVESITVYEEILRQAHYQLRHGAALYARKFRLSCSEMNGRYSSNEFIVEVNVLHSVNRVAHPSHVLSSQQFLHRGHQPPPEMAGHSLASSHRNSMVPSAATLIIVVCVGFLVLMVILGLVRIHSLHRRVSGLSGPPGASSDPKDPDLFWDDSALTIIVNPMESYQSRQACVVGAAGSQQEDEDSSDSEAANSPSSDERRIIESPAQRY