Details from NCBI annotation

Gene Symbol Ptpn6
Gene Name protein tyrosine phosphatase, non-receptor type 6, transcript variant X1
Entrez Gene ID 101725029

Database interlinks

Part of NW_004624860.1 (Scaffold)

For more information consult the page for NW_004624860.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTPN6 ENSCPOG00000008887 (Guinea pig)

Gene Details

protein tyrosine phosphatase, non-receptor type 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007982, Guinea pig)

Protein Percentage 94.13%
CDS Percentage 91.5%
Ka/Ks Ratio 0.0514 (Ka = 0.028, Ks = 0.5454)

PTPN6 ENSG00000111679 (Human)

Gene Details

protein tyrosine phosphatase, non-receptor type 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000391592, Human)

Protein Percentage 89.49%
CDS Percentage 86.72%
Ka/Ks Ratio 0.06108 (Ka = 0.0581, Ks = 0.9505)

Ptpn6 ENSMUSG00000004266 (Mouse)

Gene Details

protein tyrosine phosphatase, non-receptor type 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000004377, Mouse)

Protein Percentage 92.11%
CDS Percentage 87.19%
Ka/Ks Ratio 0.03733 (Ka = 0.0377, Ks = 1.0087)

Ptpn6 ENSRNOG00000014294 (Rat)

Gene Details

protein tyrosine phosphatase, non-receptor type 6 (Ptpn6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059867, Rat)

Protein Percentage 92.11%
CDS Percentage 88.2%
Ka/Ks Ratio 0.04454 (Ka = 0.038, Ks = 0.8535)

Genome Location

Sequence Coding sequence

Length: 1791 bp    Location: 3580417..3595403   Strand: +
>XM_004869472.1
ATGCTGTCCAGCGGGTGGTTCCACCGGGACCTCAGCGGGCTGGACGCAGAGACCCTGCTCAAGGGTCGCGGTGTGGATGGGAGCTTCCTGGCTCGGCCCAGCAGCAAGAACCAGGGCGACTTCTCGCTGTCTGTCAGGGTAGGGGATCAGGTGACCCACATTCGGATCCAGAACTCGGGGGACTTCTACGACCTGTATGGAGGGGAGAAGTTCGCCACGCTGACCGAGCTGGTGGAGTTCTACACGCAGCAGCAGGGTGTGCTGCAGGACCGGGATGGCACCATCATCCACCTCAAGTACCCACTCAACTGCTCCGACCCCACCAGCGAGAGGTGGTACCATGGGCACATGTCGGGGATGCAGGCGGAGGCGCTGCTGCAGGCCAAGGGTGAGCCCTGGACCTTCCTGGTTCGCGAGAGCCTCAGCCAGCCCGGGGACTTCGTGCTGTCAGTGCTCAGTGACCAGCCCAAGGCCAGCATGGGCTCCGCACTCAAGGTCACCCACATCAAGGTCATGTGTGAGGGTGGACGCTACACGGTGGGCGGCTCGGAGACCTTTGACAGCCTCACAGACCTGGTGGAGCATTTCAAGAAGACGGGGATTGAGGAGGCCTCAGGTGCCTTTGTCTACCTGCGGCAGCCTTACTATGCCACTCGGGTGAATGCAGCCGACATTGAGAACCGGGTCTTGGAGCTGAACAAGAAGAAGGAGTGGGAGGACACGGCCAAGGCTGGCTTCTGGGAGGAGTTTGAGAGTCTGCAGAAGCAGGAGGTGAAGAACTTGCACCAGCGGCTGGAAGGGCAGCGGCCGGAGAACAAGAGCAAAAACCGTTACAAGAACATTCTCCCCTTTGACCACACCCGCGTGATCCTGCAGCGACGAGACAGTAGCATCCCCGGGTCCGACTACATAAATGCCAACTACGTCAAGAACCAGCTGCTAGGCTTGGACGAGAGCTCTAAGACCTACATCGCCAGCCAGGGCTGCCTAGAGACCACGGTCAACGACTTCTGGCAGATGGTGTGGCAGGAGAACACACGCGTCATTGTCATGACCACCCGGGAGGTGGAGAAAGGCCGGAACAAATGTGTCCCCTACTGGCCGGAGGTGGGCACTCAGCACGCCTATGGACACTACTCTGTGACCAACTGTGGAGAGCACGACGCAGCCGAGTACAAACTCCGCACCCTGCAGGTGTCCCCGCTGGACAATGGGGACCTGATTCGGGAGATCTGGCACTACCAGTACCTGAGCTGGCCTGACCATGGAGTGCCCAGTGAGCCTGGGGGTGTCCTCAGCTTCCTGGACCAGATCAACCAGCGGCAGGAGAAGCTGCCCCATGCTGGGCCCATCATTGTGCATTGCAGCGCGGGCATCGGCCGCACGGGCACCATCATCGTCATCGACATGCTCATGGAGAGCATCGCCACCAAGGGGCTGGACTGCGACATCGACATCCAGAAGACGATCCAGATGGTGCGGGCACAGCGCTCGGGCATGGTGCAGACAGAGGCGCAGTACAAGTTCATCTACGTGGCCATGGCCCAGTTCATCGAGACCACGAAGAAGAAGCTGGAGGTGATGCAGTCCCAGAAGGGCCAGGAGTCGGAGTACGGGAACATCACCTACCCGCCCGCCCTGAAGAGCGCCCACGCCAAGGCCGCCCGGACCTCCTCCAAACACAAGGAGGACGTCTACGAGAACCTGCATGGCAAGAAGAAGGAGGAGAAGGTGAAGAAGCAGCGATCCTCGGACAAGGAGAAGGGCAAAGGTTCCCTCAGGAGGAAGTGA

Related Sequences

XP_004869529.1 Protein

Ptpn6 PREDICTED: tyrosine-protein phosphatase non-receptor type 6 isoform X1 [Heterocephalus glaber]

Length: 596 aa      View alignments
>XP_004869529.1
MLSSGWFHRDLSGLDAETLLKGRGVDGSFLARPSSKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEFYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGMQAEALLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKASMGSALKVTHIKVMCEGGRYTVGGSETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKKEWEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKSKNRYKNILPFDHTRVILQRRDSSIPGSDYINANYVKNQLLGLDESSKTYIASQGCLETTVNDFWQMVWQENTRVIVMTTREVEKGRNKCVPYWPEVGTQHAYGHYSVTNCGEHDAAEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQEKLPHAGPIIVHCSAGIGRTGTIIVIDMLMESIATKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAMAQFIETTKKKLEVMQSQKGQESEYGNITYPPALKSAHAKAARTSSKHKEDVYENLHGKKKEEKVKKQRSSDKEKGKGSLRRK