Sequence details NCBI ID: XM_004869465.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lrrc23
Gene Name leucine rich repeat containing 23, transcript variant X4
Entrez Gene ID 101722312

Database interlinks

Part of NW_004624860.1 (Scaffold)

For more information consult the page for NW_004624860.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC23 ENSCPOG00000012349 (Guinea pig)

Gene Details

leucine rich repeat containing 23

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011111, Guinea pig)

Protein Percentage 90.88%
CDS Percentage 88.75%
Ka/Ks Ratio 0.09451 (Ka = 0.0453, Ks = 0.4791)

LRRC23 ENSG00000010626 (Human)

Gene Details

leucine rich repeat containing 23

External Links

Gene Match (Ensembl Protein ID: ENSP00000007969, Human)

Protein Percentage 81.16%
CDS Percentage 83.99%
Ka/Ks Ratio 0.15158 (Ka = 0.0992, Ks = 0.6547)

Lrrc23 ENSMUSG00000030125 (Mouse)

Gene Details

leucine rich repeat containing 23

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032218, Mouse)

Protein Percentage 77.06%
CDS Percentage 80.73%
Ka/Ks Ratio 0.1426 (Ka = 0.1279, Ks = 0.897)

Genome Location

Sequence Coding sequence

Length: 990 bp    Location: 3542928..3553849   Strand: +
Raw sequence   
>XM_004869465.1
ATGTCAGACGAAGATCTGGACAACTTGGAGCCAGAGCAGGATGATCTGGAAAAAGAAGATGATAAGGACACAGAGGAGTGGGAAGACTACAGGAAAGAGGGGGAAGACTTGACTGAAGAATGGCTGCCCACGCCCCTGACGGAGGAGATGGTGAAGGAAGGGCTGTCTATGCTCTGTAAGACAGGCAATGGGCTGGCGCATGCTTATGTGAAGCTGGATCTTAAAGACAGAGACCTGACAGACATCTCCTTGCTATGCTCCTACATCCATCTGCGCTATGTGGATATCTCTGAGAACCACCTGACAGACCTGGCACCGCTCAATAACCTCACCCACCTGCTGTGGCTCAAGGCCGATGGCAACCAGCTTCGGAGTGCCCAGCTGAACGAGCTGCCCTACCTGCAGATCGCCAGCTTTGCCTACAACCAGATCACCGACACTGAAGGCATCTGTCATCCTCGGCTAGTGAGCCTGGATCTCAAAGGGAACCACATCCAGGTGGTGACCAGCCTAGACCCTGAGAAGCTGCAGAGCCTGCACACCCTGGAGCTCCGGGGGAACCAGCTGTACACCACCGCAGGGATCAACCTCCCGAAGCTGAAGAAGCTCTTTCTGGCCCAGAACATGCTGAAGAACGTGGAAGGCTTGGAGAACCTAAGCGACCTCACCACCTTACATCTTCGAGACAACCACATCGAATCTCTGAGCGGCTTTTCCAAGGAAATGCAGTCGCTGCAGTACCTCAACTTGAGGGGCAACGCAATAACCAGCCTGGGGGAGCTGGCCAAGCTTCGGGACCTGCCTAAACTGCGAGCTCTGGTGCTGCTGGAGAACCCGTGCACAGACGAGACCGACTACCACCAGGAGGCCCTGGTGCAGATGCCGCACCTGGAGCGCCTGGACAAGGACTTCTACGAGGAGGAAGAGAGGGCTGAGGCTGACGAGAAACGTCAGAGGATGAAGGAGGACCAGGAGCAGGAGCGAGCCTGA

Related Sequences

XP_004869522.1 Protein

Lrrc23 PREDICTED: leucine-rich repeat-containing protein 23 isoform X4 [Heterocephalus glaber]

Length: 329 aa      
>XP_004869522.1
MSDEDLDNLEPEQDDLEKEDDKDTEEWEDYRKEGEDLTEEWLPTPLTEEMVKEGLSMLCKTGNGLAHAYVKLDLKDRDLTDISLLCSYIHLRYVDISENHLTDLAPLNNLTHLLWLKADGNQLRSAQLNELPYLQIASFAYNQITDTEGICHPRLVSLDLKGNHIQVVTSLDPEKLQSLHTLELRGNQLYTTAGINLPKLKKLFLAQNMLKNVEGLENLSDLTTLHLRDNHIESLSGFSKEMQSLQYLNLRGNAITSLGELAKLRDLPKLRALVLLENPCTDETDYHQEALVQMPHLERLDKDFYEEEERAEADEKRQRMKEDQEQERA