Sequence details NCBI ID: XM_004869437.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cops7a
Gene Name COP9 signalosome subunit 7A
Entrez Gene ID 101714628

Database interlinks

Part of NW_004624860.1 (Scaffold)

For more information consult the page for NW_004624860.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

COPS7A ENSCPOG00000000315 (Guinea pig)

Gene Details

COP9 signalosome subunit 7A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000274, Guinea pig)

Protein Percentage 89.33%
CDS Percentage 86.17%
Ka/Ks Ratio 0.15951 (Ka = 0.0752, Ks = 0.4712)

COPS7A ENSG00000111652 (Human)

Gene Details

COP9 signalosome subunit 7A

External Links

Gene Match (Ensembl Protein ID: ENSP00000438115, Human)

Protein Percentage 89.72%
CDS Percentage 84.19%
Ka/Ks Ratio 0.10776 (Ka = 0.0724, Ks = 0.6716)

Cops7a ENSMUSG00000030127 (Mouse)

Gene Details

COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000108058, Mouse)

Protein Percentage 84.19%
CDS Percentage 79.84%
Ka/Ks Ratio 0.1231 (Ka = 0.1122, Ks = 0.9118)

Cops7a ENSRNOG00000016778 (Rat)

Gene Details

COP9 signalosome subunit 7A (Cops7a), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022874, Rat)

Protein Percentage 84.19%
CDS Percentage 79.84%
Ka/Ks Ratio 0.11868 (Ka = 0.1106, Ks = 0.9322)

Genome Location

Sequence Coding sequence

Length: 774 bp    Location: 3421516..3427606   Strand: +
Raw sequence   
>XM_004869437.1
ATGTGTCCTCTCGAGCCAGGATCGGTGACGCTGGCTGGGAAAGATGGAGCTAGGAGGGTGGCAAGGGGGTCCTGCCTGTCACTACTTCTCTTCCCTCCTATTGTGCAGCTGGCTGAGAGTGACTTTGCTTCCACGTTCCGGCTGCTCACAGTCTTCGCTTATGGAACATACGCTGACTACTTAGCTGAGGCCAGGACTCTTCCCCCACTCACAGAGGCGCAGAAGAACAAGCTTCGGCACCTTTCTGTCGTCACCCTGGCCGCCAAAGTCAAGTGCATCCCTTACGCGGTGCTGCTGGAAGCCCTGGCTCTGCACAACGTGCGGCAGCTGGAAGACCTCGTGATCGAGGCCGTGTATGCTGACGTGCTTCGAGGCTCCCTGGACCAGCGCAATCAGCGGCTGGAGGTCGACTACAGCATTGGGAGGGACATCCAGCGCCAGGACCTCAGTGCCATTGCGCGCACCCTGCAGGAGTGGTGCGTGGGCTGTGAAGTTGTGCTGTCGGGCATTGAGGAGCAGGTGAGCCGCGCCAACCAGCACAAGGAGCAGCAGCTGGGCCTGAAGCAGCAGATCGAGAGCGAGGTCGCCAACCTTAAAAAAACCATTAAAGTCACCACGGCAGCAGCAGCTGCAGCCACGTCTCAGGACCCTGAGCAACACCTGACCGAGCTGAGGGAACCCGCTCCAGGCACTAACCAGCGCCAGCCTAGCAAGAAAGCCTCCAAGGGCAAGGGGCTCCGGGGGAGCGCCAAGATCTGGTCCAAGTCAAACTGA

Related Sequences

XP_004869494.1 Protein

Cops7a PREDICTED: COP9 signalosome complex subunit 7a [Heterocephalus glaber]

Length: 257 aa      View alignments
>XP_004869494.1
MCPLEPGSVTLAGKDGARRVARGSCLSLLLFPPIVQLAESDFASTFRLLTVFAYGTYADYLAEARTLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALHNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN