Details from NCBI annotation

Gene Symbol Iffo1
Gene Name intermediate filament family orphan 1, transcript variant X1
Entrez Gene ID 101705390

Database interlinks

Part of NW_004624860.1 (Scaffold)

For more information consult the page for NW_004624860.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IFFO1 ENSCPOG00000001041 (Guinea pig)

Gene Details

intermediate filament family orphan 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000938, Guinea pig)

Protein Percentage 96.86%
CDS Percentage 94.16%
Ka/Ks Ratio 0.04374 (Ka = 0.0146, Ks = 0.3329)

IFFO1 ENSG00000010295 (Human)

Gene Details

intermediate filament family orphan 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000349364, Human)

Protein Percentage 94.65%
CDS Percentage 91.14%
Ka/Ks Ratio 0.04558 (Ka = 0.0267, Ks = 0.5854)

Iffo1 ENSMUSG00000038271 (Mouse)

Gene Details

intermediate filament family orphan 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000056373, Mouse)

Protein Percentage 93.16%
CDS Percentage 89.16%
Ka/Ks Ratio 0.04469 (Ka = 0.0314, Ks = 0.7035)

Iffo1 ENSRNOG00000018533 (Rat)

Gene Details

intermediate filament family orphan 1 (Iffo1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000041102, Rat)

Protein Percentage 89.98%
CDS Percentage 86.27%
Ka/Ks Ratio 0.06216 (Ka = 0.0536, Ks = 0.8622)

Genome Location

Sequence Coding sequence

Length: 1659 bp    Location: 3273513..3262205   Strand: -
>XM_004869402.1
ATGAATCCGTTATTCGGCCCCAACCTCTTCCTCCTACAGCAGGAGCAGCAGGGCTTGGCCGGGCCTCTGGGGGGCGACCCCTTTCCCGGGGGCGGGGACTTGCCCCCGGCGCCGCTCGCGCCCGCCGGCCCCGCTGCTTTCTCGCCGCCCGGGCCCGGCCCCGCGCCCCCCGCCGCCATGGCGCTGCGAAACGACCTGGGCTCCAACATCAGCGTGCTCAAGACGCTGAACCTGCGCTTCCGCTGCTTCCTGGCCAAGGTGCACGAGCTGGAGCGCCGGAACCGGCTGCTGGAGAAGCAGCTGCAGCAGGCGCTGGAGGAGGGTAAGCAGGGCCGGCGGGGCTCTGCGCGCCGAGACCAGGCTGTGCAGACCGGCTTCGTCAGCCCGGTGCGGCCGCTGGGGCTGGCGCTGGGTGCGCGGCCGGCCGCCGTCTGCCCCCCGGCACGCTCCCCGGCCTGCCCCGCGCCGCCCTCCGCCGCCTCGGCCTCCTCCTTCTCGTCGTCGGGCCGCTTCATGCCCGGCACCATCTGGTCCTTCTCGCACTCCCGCCGGCTCGGGCCAGGACTGGAGCCCACGCTGGTGCAGGGGCCCGGCCTGTCGTGGGTGCACCCTGACGGGGTGGGCGTCCAGATCGACACTATCACTCCCGAGATCCGCGCGCTCTACAACGTGCTGGCCAAAGTAAAGCGGGAGCGGGACGAGTACAAGCGGAGGTGGGAAGAGGAATACACGGTGCGGATCCAGCTGCAGGAGCGCGTGAACGAGCTCCAGGAGGAAGCCCAAGAGGCTGATGCCTGCCAAGAGGAGCTGGCCATGAAGGTGGAGCAGCTGAAAGCCGAGCTGGTGGTCTTCAAGGGGCTCATGAGCAATAACCTGTCAGAGCTGGACACCAAGATCCAGGAGAAGGCCATGAAGGTGGACATGGACATCTGCCGCCGCATCGACATCACTGCCAAGCTGTGTGACCTGGCTCAGCAGCGCAACTGTGAGGACATGATCCAGATGTTCCAGAAGAAGCTGCCTCTGCACTTGTCTCCCATCAAGGTCCCATCCATGGGGGGGCGGAAGCGGGAGCGCAAGGCTGCTGTGGAGGAGGACACCTCGGTGTTGGTGTCGGAGAGTGAGGGGCCCTGCCAGCCCGATGGGGAGGAGGAGGAGAGCACGGCCCTGAGCATCAATGAGGAGATGCAGCGCATGCTGAACCATCTGAGGGAGTATGATTTTGAGGACGACTGTGACAGCCTGACTTGGGAGGAGACTGAGGAGACCCTGCTGCTGTGGGAGGATTTCTCGGGCTATGCCCTGGCGGCAGCAGAGGCCCAGGGAGAGCAGCAGGAAGACAGCCTGGAGAAGGTGATCAAAGACACCGAGTCCCTGTTCAAAACCCGGGAGAAGGAGTATCAGGAAACCATCGACCAGATAGAGCTGGAGCTGGCCACGGCCAAGAACGACATGAACCGGCACCTGCACGAGTACATGGAGATGTGCAGCATGAAGCGGGGCCTGGATGTGCAGATGGAGACCTGCCGCCGGCTCATCACACAGTCCGGCGACCGAAAGTCTCCTGCTTTCACTTCGGTCCCGCCTAGTGACCCACCGCCGCCAAGCGAAACTGAGGACTCCGATCGCGATGTTGCATCTGACAGCTCCATGAGATAA

Related Sequences

XP_004869459.1 Protein

Iffo1 PREDICTED: intermediate filament family orphan 1 isoform X1 [Heterocephalus glaber]

Length: 552 aa      View alignments
>XP_004869459.1
MNPLFGPNLFLLQQEQQGLAGPLGGDPFPGGGDLPPAPLAPAGPAAFSPPGPGPAPPAAMALRNDLGSNISVLKTLNLRFRCFLAKVHELERRNRLLEKQLQQALEEGKQGRRGSARRDQAVQTGFVSPVRPLGLALGARPAAVCPPARSPACPAPPSAASASSFSSSGRFMPGTIWSFSHSRRLGPGLEPTLVQGPGLSWVHPDGVGVQIDTITPEIRALYNVLAKVKRERDEYKRRWEEEYTVRIQLQERVNELQEEAQEADACQEELAMKVEQLKAELVVFKGLMSNNLSELDTKIQEKAMKVDMDICRRIDITAKLCDLAQQRNCEDMIQMFQKKLPLHLSPIKVPSMGGRKRERKAAVEEDTSVLVSESEGPCQPDGEEEESTALSINEEMQRMLNHLREYDFEDDCDSLTWEETEETLLLWEDFSGYALAAAEAQGEQQEDSLEKVIKDTESLFKTREKEYQETIDQIELELATAKNDMNRHLHEYMEMCSMKRGLDVQMETCRRLITQSGDRKSPAFTSVPPSDPPPPSETEDSDRDVASDSSMR