Details from NCBI annotation

Gene Symbol Ltbr
Gene Name lymphotoxin beta receptor (TNFR superfamily, member 3), transcript variant X2
Entrez Gene ID 101699564

Database interlinks

Part of NW_004624860.1 (Scaffold)

For more information consult the page for NW_004624860.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LTBR ENSCPOG00000015661 (Guinea pig)

Gene Details

lymphotoxin beta receptor (TNFR superfamily, member 3)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014124, Guinea pig)

Protein Percentage 83.41%
CDS Percentage 87.26%
Ka/Ks Ratio 0.29228 (Ka = 0.0926, Ks = 0.3169)

LTBR ENSG00000111321 (Human)

Gene Details

lymphotoxin beta receptor (TNFR superfamily, member 3)

External Links

Gene Match (Ensembl Protein ID: ENSP00000228918, Human)

Protein Percentage 70.41%
CDS Percentage 77.65%
Ka/Ks Ratio 0.32238 (Ka = 0.195, Ks = 0.6048)

Ltbr ENSMUSG00000030339 (Mouse)

Gene Details

lymphotoxin B receptor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032489, Mouse)

Protein Percentage 76.03%
CDS Percentage 78.37%
Ka/Ks Ratio 0.24202 (Ka = 0.1653, Ks = 0.6828)

Ltbr ENSRNOG00000019264 (Rat)

Gene Details

lymphotoxin beta receptor (TNFR superfamily, member 3) (Ltbr), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026184, Rat)

Protein Percentage 73.67%
CDS Percentage 78.18%
Ka/Ks Ratio 0.26474 (Ka = 0.1736, Ks = 0.6559)

Genome Location

Sequence Coding sequence

Length: 1263 bp    Location: 3152328..3158692   Strand: +
>XM_004869384.1
ATGCGCCTGCCTCCAGCCGCCTCTCCCTGCGGCCTGGCCTGGGGGCCACTCCTGCTGGGCCTCTGTGGCCTCCTGGCAGCATCCCAGCCCCAGCTGGTGCCCCCTTACCGCTCTGAGGACCGCACGTGCTGGGACCAGGAGAAGGAGTACTATGAGCCCAAGCATCAGGTCTGCTGCTCCCGGTGTCCTCCAGGCACCTTCGTCACAGCCGAATGCAGCCGCAGCCAGAACACGGTCTGTACCACGTGTGCCGAAAATTCCTACAACGAGCACTGGAACCACCTCTCCATCTGCCAGCTGTGCCGGCCCTGCGACCTGGTGCTGGGCTTCCTGGAGGTTGCGCCTTGCAGCAGCACTCGCAAGACGGAGTGTCGCTGCCAGCCGGGAATGTTCTGCGCCCACTGGGACACCGAGTGTGTGCACTGTGAGCCGCTCTCCGAGTGTCCCCCCGGCACTGAAGCCTCGCGCCAAGATGGAGATGAGGAGGCCGACAACACCTGCACCCCCTGCAGGACAGGGCACTTCCAGAACGCCTCCTCCTCCAGTGCCCGCTGCCAGCCCCACACCAGGTGCAAGGACCGGGGCTTGGTGGAGGCAGCCCCAGGCACTGCCCAGTCTGACACGAGCTGCAGAAACCCACCAGAGCCACTGCCCCCCAAGACACCAGGCACGATGCTGGTGCTGGCCATCCTGCTGCCCCTGCTCTCCCTTCTGCTGCTCACCACTGTGGCCGCCTGCACCTGGAAGAGCCACCCTTCTCTCTGCAGAAAGCTGGGATTGCTGCTCAAGAGCCGTCCAGAGGGAGAAGAATCCCCCTCCTGCCCCCTTCCAAGGGCCAGCCCTCATGTCCCTGACTTGGTGAAGCCACTACTGCCCGTCTCTGGAGATCTGTCCCCGGGCCCCACCCGACCCCCAGGACACCCACCTCAGGAGGAAGTGGTGCCGCAGCAGCAGCAGTGTCCTCTGAACCAGACCAGGGAGCCGGAGGCTGAGTTGGGGGAGCAGAGCCAGGTGGCCCACGGTGCCAGCGGCATTCATGTCACCGGGGGCTCTGTGACCGTCACTGGCAACATCTACATCTACAATGGGCCGGTGCTGGGGGGAGCGCGGGGCCCGGGAGACCCCCCGGCTTCCCCCGAGCCTCCGTACCCCACTCCTGAAGAGGGTGCTTCCGGCCCTTCGCAGCTGTCTGTGCCCTACCAGGAAGACGGCAAAGCTTGGCATCTGGCCGAGACAGAGACACTGGGGTGCCACGCGCTCTGA

Related Sequences

XP_004869441.1 Protein

Ltbr PREDICTED: tumor necrosis factor receptor superfamily member 3 isoform X2 [Heterocephalus glaber]

Length: 420 aa      View alignments
>XP_004869441.1
MRLPPAASPCGLAWGPLLLGLCGLLAASQPQLVPPYRSEDRTCWDQEKEYYEPKHQVCCSRCPPGTFVTAECSRSQNTVCTTCAENSYNEHWNHLSICQLCRPCDLVLGFLEVAPCSSTRKTECRCQPGMFCAHWDTECVHCEPLSECPPGTEASRQDGDEEADNTCTPCRTGHFQNASSSSARCQPHTRCKDRGLVEAAPGTAQSDTSCRNPPEPLPPKTPGTMLVLAILLPLLSLLLLTTVAACTWKSHPSLCRKLGLLLKSRPEGEESPSCPLPRASPHVPDLVKPLLPVSGDLSPGPTRPPGHPPQEEVVPQQQQCPLNQTREPEAELGEQSQVAHGASGIHVTGGSVTVTGNIYIYNGPVLGGARGPGDPPASPEPPYPTPEEGASGPSQLSVPYQEDGKAWHLAETETLGCHAL