Details from NCBI annotation

Gene Symbol Tnfrsf1a
Gene Name tumor necrosis factor receptor superfamily, member 1A, transcript variant X2
Entrez Gene ID 101698980

Database interlinks

Part of NW_004624860.1 (Scaffold)

For more information consult the page for NW_004624860.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TNFRSF1A ENSCPOG00000000579 (Guinea pig)

Gene Details

tumor necrosis factor receptor superfamily, member 1A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000508, Guinea pig)

Protein Percentage 69.66%
CDS Percentage 77.62%
Ka/Ks Ratio 0.36979 (Ka = 0.206, Ks = 0.5571)

TNFRSF1A ENSG00000067182 (Human)

Gene Details

tumor necrosis factor receptor superfamily, member 1A

External Links

Gene Match (Ensembl Protein ID: ENSP00000162749, Human)

Protein Percentage 69.79%
CDS Percentage 76.05%
Ka/Ks Ratio 0.24439 (Ka = 0.1977, Ks = 0.8089)

Tnfrsf1a ENSMUSG00000030341 (Mouse)

Gene Details

tumor necrosis factor receptor superfamily, member 1a

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032491, Mouse)

Protein Percentage 61.93%
CDS Percentage 71.56%
Ka/Ks Ratio 0.28784 (Ka = 0.2641, Ks = 0.9175)

Tnfrsf1a ENSRNOG00000031312 (Rat)

Gene Details

tumor necrosis factor receptor superfamily, member 1a (Tnfrsf1a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000042371, Rat)

Protein Percentage 63.24%
CDS Percentage 72.22%
Ka/Ks Ratio 0.31117 (Ka = 0.2615, Ks = 0.8404)

Genome Location

Sequence Coding sequence

Length: 1386 bp    Location: 3124704..3111244   Strand: -
>XM_004869382.1
ATGGGCCTCCCCACCGTGCCTGGCCCGCTGCTGCCACTGGTGCTCCTGGCTCTGCTGGTGGGGATACATTCATCAGGTGTCATTGGCCTGGTCCCTTCCTTTGGGGATCGGGAGAAGAGGGAGAGTCCGTGTCCCCAGGGAAAATACAGCCACCCTCAAAACAATTCCATCTGCTGCACCAAGTGCCACAAAGGGACCTACTTGCACAATGACTGCCTGGGCCCCGGGCTGGACACGGACTGCAGGGAGTGTGCAAGCGGCACCTTCACCTCCACTGAGAACCACTCCCCTGTGTGCCTCACCTGCTCCAGCTGTCGGAAAGAACTGCTCCAGGTGGAGCTTTCTCCTTGCACAGTGGACCAGGACACTGTGTGTGGCTGCAGGAAGAACCAGTTCCGGAACTATTATGGGGAAACATATTTCCGGTGCACGGACTGCAGCCAGTGCCTCAATGGCACCGTGACGATCCGATGCCAGGAGAGACAGAACACTGTGTGCCTCTGCCACACAGGCTTCTTTCTGAGAGGCAGCAAGTGTGTCTCTTGCAGCGAATGTAAGCAAGACTCGGAGTGCACGAAGTTGTGCCCACACCCTGTAGTTAGGCCCCCCCAGGACTCAGGTACCACAGTGCTGTTGCCCCTGGTGATCCTGTTAGGCCTTTGCCTTTTATCTTTGCTCTTCATCGTTTTAATGTGCCGCTATCCAAGGTGGAAGCCGAAGCTCTACTCTATTGTTTGTGGGACATCAGCACCCGTGAAAGAGGGCGAGCTGGAAGGAATTACGTCCACTAAGCCCCTCGCCCCGACCCCGGGTTTCAGCCCCACGGCCAGCTGCAGGCTGCCCCCCAGCTCTCCCTCCCCTCCGAGGGGCCCTGGGGACTTCAGGGACGTCGCTGCCCCACCCCTGGGGGCTGAGCCCATCTTCGCCCCGGGGCTCACGGCGGCGCCCGTCCCCAGGGCCGGCCATGGCCACAACGGGGAAGACGGCGCCGACAGCCAAGGAGGGCGCTGGCCGGCCGCAGGCCCCGAGCCCGCAACGCTGTACGCCGTGGTGGACGGCGTGCCTCCGTCCCGCTGGAAGGAGTTCATGCGACGCCTGGGGCTGGGCGAGCATGAGATCGAGCGGCTGGAGCTGCAGAACGGGCGCTGCCTGCGCGAGGCGCACTACAGCATGCTGGCAGCCTGGCGGCAGCGCACCCCGCCACACGAGGCCACGCTGGACCTGCTGGGCCGCGTGCTGTGCGACATGGACCTCCTGGGCTGCCTGGAGGACATCCGGGACACGCTGCGGGGGCGGGCATGCGAGGCCCTGCCCTCCAGTGGCCCTGCACCAATTGGGGCGCCTTCTCGGGGCCTCCGACTAAGCCTGACGCGCGATGCCCTGTGA

Related Sequences

XP_004869439.1 Protein

Tnfrsf1a PREDICTED: tumor necrosis factor receptor superfamily member 1A isoform X2 [Heterocephalus glaber]

Length: 461 aa      View alignments
>XP_004869439.1
MGLPTVPGPLLPLVLLALLVGIHSSGVIGLVPSFGDREKRESPCPQGKYSHPQNNSICCTKCHKGTYLHNDCLGPGLDTDCRECASGTFTSTENHSPVCLTCSSCRKELLQVELSPCTVDQDTVCGCRKNQFRNYYGETYFRCTDCSQCLNGTVTIRCQERQNTVCLCHTGFFLRGSKCVSCSECKQDSECTKLCPHPVVRPPQDSGTTVLLPLVILLGLCLLSLLFIVLMCRYPRWKPKLYSIVCGTSAPVKEGELEGITSTKPLAPTPGFSPTASCRLPPSSPSPPRGPGDFRDVAAPPLGAEPIFAPGLTAAPVPRAGHGHNGEDGADSQGGRWPAAGPEPATLYAVVDGVPPSRWKEFMRRLGLGEHEIERLELQNGRCLREAHYSMLAAWRQRTPPHEATLDLLGRVLCDMDLLGCLEDIRDTLRGRACEALPSSGPAPIGAPSRGLRLSLTRDAL