Sequence details NCBI ID: XM_004869331.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rhno1
Gene Name RAD9-HUS1-RAD1 interacting nuclear orphan 1, transcript variant X4
Entrez Gene ID 101712852

Database interlinks

Part of NW_004624860.1 (Scaffold)

For more information consult the page for NW_004624860.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RHNO1 ENSCPOG00000001257 (Guinea pig)

Gene Details

RAD9-HUS1-RAD1 interacting nuclear orphan 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001138, Guinea pig)

Protein Percentage 75.97%
CDS Percentage 84.12%
Ka/Ks Ratio 0.54045 (Ka = 0.1489, Ks = 0.2755)

RHNO1 ENSG00000171792 (Human)

Gene Details

RAD9-HUS1-RAD1 interacting nuclear orphan 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000438590, Human)

Protein Percentage 70.09%
CDS Percentage 77.64%
Ka/Ks Ratio 0.462 (Ka = 0.2155, Ks = 0.4664)

Rhno1 ENSMUSG00000048668 (Mouse)

Gene Details

RAD9-HUS1-RAD1 interacting nuclear orphan 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000107779, Mouse)

Protein Percentage 65.67%
CDS Percentage 72.68%
Ka/Ks Ratio 0.36832 (Ka = 0.2625, Ks = 0.7126)

RHNO1 ENSRNOG00000028517 (Rat)

Gene Details

RAD9, HUS1, RAD1-interacting nuclear orphan protein 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036772, Rat)

Protein Percentage 67.38%
CDS Percentage 72.68%
Ka/Ks Ratio 0.36232 (Ka = 0.2581, Ks = 0.7123)

Genome Location

Sequence Coding sequence

Length: 738 bp    Location: 226762..230708   Strand: +
Raw sequence   
>XM_004869331.1
ATGTGCTGCCTTCACCTACTGATGCCTCCCAAAAAAGGACGTGGCCAGCCATCCCACAAAGCCCAGCTGCTGTTCCACCAACAACCACTGGAGGGCCCCAAGCACCACTGTGGATCCGTAAAGCAACGCCTCACTCGGACTCGGACTCGGCAGGTGCCCAGCAAGCCTATCGATGGAGCCATTGCTTCCTGGGTATCACCTCAGTTTGACACAACAGTAGAAAGCTTTTTTCCAGGCCACCAGAAACATCACCAAGATCGGGCAAGACTTTCAAGTCGAAAATCAACCTGCAAATTTCCACATCTAGTCTTTGAGAATCCACTGTTCTCTTCCAGTCCAGAAATACCAGAAATCCCCTCAGTCAAGGAGTGCCGCAGTCAATCAGAAAAGGACATTTCCAGACAGCCTCTGGTTCCGATGTTCAGTCCCCAGACCTGTGGGGAGCTGTCAGCACATGCACTCCAGAGCTTGCCATGCGTGTTTGCTGCCCCTGACATCCAGACCCCAGGACCATCTGTGAGGGAAGATTCCAGTCCCCCAGAGCAGAGGGAAAACAGCCTTCCAGTCTGTGTCCACACCTGTGCTCCCCACAGCCCAGAGCCTGGGCCTGTTCTGGTTAAAGACACCCCAGAGGAGAAGTATGGGATAAAAGTGACATGGAGGAGGCGAAGGCATCTATTTGAGTACCTCAGGGAGAGAGGGAAGTTGAGCAGAAGCCAGTTCCTGGTGAACAGCTGA

Related Sequences

XP_004869388.1 Protein

Rhno1 PREDICTED: RAD9, HUS1, RAD1-interacting nuclear orphan protein 1 isoform X4 [Heterocephalus glaber]

Length: 245 aa      View alignments
>XP_004869388.1
MCCLHLLMPPKKGRGQPSHKAQLLFHQQPLEGPKHHCGSVKQRLTRTRTRQVPSKPIDGAIASWVSPQFDTTVESFFPGHQKHHQDRARLSSRKSTCKFPHLVFENPLFSSSPEIPEIPSVKECRSQSEKDISRQPLVPMFSPQTCGELSAHALQSLPCVFAAPDIQTPGPSVREDSSPPEQRENSLPVCVHTCAPHSPEPGPVLVKDTPEEKYGIKVTWRRRRHLFEYLRERGKLSRSQFLVNS