Details from NCBI annotation

Gene Symbol Ttc39a
Gene Name tetratricopeptide repeat domain 39A, transcript variant X1
Entrez Gene ID 101719366

Database interlinks

Part of NW_004624859.1 (Scaffold)

For more information consult the page for NW_004624859.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TTC39A ENSCPOG00000008138 (Guinea pig)

Gene Details

tetratricopeptide repeat domain 39A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007318, Guinea pig)

Protein Percentage 93.08%
CDS Percentage 91.0%
Ka/Ks Ratio 0.13232 (Ka = 0.0437, Ks = 0.3306)

TTC39A ENSG00000085831 (Human)

Gene Details

tetratricopeptide repeat domain 39A

External Links

Gene Match (Ensembl Protein ID: ENSP00000406144, Human)

Protein Percentage 93.12%
CDS Percentage 90.88%
Ka/Ks Ratio 0.07275 (Ka = 0.0311, Ks = 0.4273)

Ttc39a ENSMUSG00000028555 (Mouse)

Gene Details

tetratricopeptide repeat domain 39A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000102229, Mouse)

Protein Percentage 94.28%
CDS Percentage 88.79%
Ka/Ks Ratio 0.05325 (Ka = 0.0318, Ks = 0.5976)

Genome Location

Sequence Coding sequence

Length: 1746 bp    Location: 1760713..1803133   Strand: +
>XM_004869265.1
ATGGCCTTTCTGACCACTTGGAAGGGGGCGGCCTCCAGGAGAAGCGACCGCAGGACTCCTGTGACCAGCCTTCATGAGGCCCTGGACCAATGCATGATCGCCCTGGACCTCTTCCTTACCAACCAGTTCTCAGAAGCCCTCAGCTACCTCAAGCCCAGAACCAAGGAGAGCATGTACCACTCGCTGACGTATGCCACCATCCTCGAGATGCAGGCCATGATGACCTTTGACTCCCAGGACATCCTGCTTGCTGGGAACATGATGAAGGAAGCACAGTCACTGTGTCAGAGGCACCGGAGGAAGTCTTCGGTGACAGATTCCTTCAGCAACCTGGTGCACCGCCCCACTCTGGACCAGTTCACAGAAGAGGAAATCCACGCCGAGGTCTGCTATGCAGAGTGCCTGCTACAGAGAGCAGCACTGACCTTCCTGCAGGATGAGAACATGGTGAGCTTTATCAAGGGTGGTATCAAGGTCCGGAACAGCTACCAGACGTACAAGGAGCTGGACAGCCTCATGCAGTCGTCGCAGTACTACAAGGGGGAGAGTTACCGGCACTTCGAAGGAGGAGTGAAGCTTGGTGTGGGAGCCTTCAACCTGACACTGTCCATGTTGCCTACGAGGATCCTGCGGCTGCTAGAGTTTGTGGGGTTTTCTGGAAACAAGGACTACGGGCTGCTGCAGCTGGAGGAGGGTGCGACGGGCCACAGTTTCCGCGCAGTGCTCTGTGTCATGCTGCTGCTCTGCTACCACACCTTCCTCACCTTCGTGCTCGGGACTGGGAATGTCAACATCGAGGAGGCAGAGAAGCTGTTGAAGCCCTACCTGAATCGATACCCCAAGGGCGCCATCTTCCTGTTCTTTGCGGGACGGATTGAGGCCATTAAAGGCAATATTGACGCAGCCATCCGTCGGTTTGAGGAGTGCTGTGAGGCTCAGCAGCACTGGAAGCAGTTCCACCACATGTGCTACTGGGAGTTGATGTGGTGCTTCACCTACAAGGGCCAGTGGAAGATGGCCTACTTCTACGCTGACCTGCTCAGCAAGGAGAACTCCTGGTCCAAGGCCACCTACTTCTACATGAAGGCTGCCTACCTCAGCATGTTTGAGAAGGACGACTACAAGCCGTTTGGGGACAACGAGGTGGAGTTGTTCAGAGCCGTGCCAGGCCTGAAGCTCAAGATTGCTGGGAAATCGCTACCCACAGAGAAGTTTGCCATCCGGAAGTCGAGACGCTACCTCTCCCCCAACCCTGTCTCATTGCCAATCCCTGCTCTGGAAATGATGTACATCTGGAATGGCTACGCTGTGATTGGGAAGCAGCCGGAACTCACGGATGGGATGCTTGAGGTTATCACCAAGGCTGAAGAAATGCTGGCAAAGGGCCCAGAGAATGAGTACTCTGCAGATGACGAGTGCTTGGTGAAGCTGTTGAAAGGCCTGTGTCTGAAATACCTGGGCCGGGTCCAGGAGGCTGAGGAGAATTTCAGGAGCATCTCTGCCAATGAAAAGAAGATTAAATATGACCACTACTTGATCCCAAATGCCCTTCTGGAGCTGGCCCTCCTATTTATGGAACAAGGCAGAAACGAAGAGGCCATCAGACTCCTGGAATCTGCCAAACAAAACTACAAGAATTACTCCATGGAGTCAAGGACACATTTTCGAATCCAGGCAGCCACACTCCAAGCCAAGTCTTCCTTAGAGAATGGCAACAGATCCATGGTCTCATCAGTGTCCTTGTAG

Related Sequences

XP_004869322.1 Protein

Ttc39a PREDICTED: tetratricopeptide repeat protein 39A isoform X1 [Heterocephalus glaber]

Length: 581 aa     
>XP_004869322.1
MAFLTTWKGAASRRSDRRTPVTSLHEALDQCMIALDLFLTNQFSEALSYLKPRTKESMYHSLTYATILEMQAMMTFDSQDILLAGNMMKEAQSLCQRHRRKSSVTDSFSNLVHRPTLDQFTEEEIHAEVCYAECLLQRAALTFLQDENMVSFIKGGIKVRNSYQTYKELDSLMQSSQYYKGESYRHFEGGVKLGVGAFNLTLSMLPTRILRLLEFVGFSGNKDYGLLQLEEGATGHSFRAVLCVMLLLCYHTFLTFVLGTGNVNIEEAEKLLKPYLNRYPKGAIFLFFAGRIEAIKGNIDAAIRRFEECCEAQQHWKQFHHMCYWELMWCFTYKGQWKMAYFYADLLSKENSWSKATYFYMKAAYLSMFEKDDYKPFGDNEVELFRAVPGLKLKIAGKSLPTEKFAIRKSRRYLSPNPVSLPIPALEMMYIWNGYAVIGKQPELTDGMLEVITKAEEMLAKGPENEYSADDECLVKLLKGLCLKYLGRVQEAEENFRSISANEKKIKYDHYLIPNALLELALLFMEQGRNEEAIRLLESAKQNYKNYSMESRTHFRIQAATLQAKSSLENGNRSMVSSVSL