Sequence details NCBI ID: XM_004869246.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Orc1
Gene Name origin recognition complex, subunit 1
Entrez Gene ID 101713340

Database interlinks

Part of NW_004624859.1 (Scaffold)

For more information consult the page for NW_004624859.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ORC1 ENSCPOG00000005075 (Guinea pig)

Gene Details

origin recognition complex, subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004564, Guinea pig)

Protein Percentage 84.84%
CDS Percentage 88.41%
Ka/Ks Ratio 0.35829 (Ka = 0.0874, Ks = 0.2439)

ORC1 ENSG00000085840 (Human)

Gene Details

origin recognition complex, subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000360623, Human)

Protein Percentage 79.53%
CDS Percentage 83.16%
Ka/Ks Ratio 0.30335 (Ka = 0.1264, Ks = 0.4167)

Orc1 ENSMUSG00000028587 (Mouse)

Gene Details

origin recognition complex, subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099805, Mouse)

Protein Percentage 70.26%
CDS Percentage 77.1%
Ka/Ks Ratio 0.34073 (Ka = 0.1971, Ks = 0.5785)

Orc1 ENSRNOG00000008841 (Rat)

Gene Details

origin recognition complex, subunit 1 (Orc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012492, Rat)

Protein Percentage 71.43%
CDS Percentage 77.21%
Ka/Ks Ratio 0.28343 (Ka = 0.1805, Ks = 0.637)

Genome Location

Sequence Coding sequence

Length: 2619 bp    Location: 833691..863748   Strand: +
Raw sequence   
>XM_004869246.1
ATGCAGTGGATCAGCTGGAAGCCCGCAGCAGAGAAGCGAACCATGGCATCCTACAACACAAGGCAGAAGACCAGAAAAACTTATTCATGGGTTGGCAGGCCTTTGCTGGATCGAAAATTGTCCCACCAAACCTACAAAGAAATATCTGTGAAAATAGAAGGCTGTTCAACTCAGACTCACATCCAAGTTGGACAGTTTGTGTTGATTGAAGGGGAAGATGATCAAAACCCTTATATTGCAAAATTGATTGAATTGTTTGAAGACGATTCCAAACCTTGCTCTAGGAAATGTGCACGGGTACAGTGGTTTATCCGATTCTGTGAAGTTGCTCCCTGCAAACAGCATTTCTTGGGCCGGAAGCCTGACGCACAGGAGATTTTCTGGTATGACTACCCTGCCTGTGATGACAACATTAATATTGAGACCGTCATTGGCCCTGTTCGGGTCGTGGCTTTAGCACCAGACGAAGTGATACCGATGGATCTGAAAAATGAGAAGACATTCTTTGTGAAACTATCTTGGAATGGAAAGAAGTTCAGACCACTTTCCCCAGAACTATTTGCAGAGTTTGATAAACTACAAGGAGAGGGCCCCAAGTGCCAGAAGCCCAGGACTAAGAATGCAGAAAGCCCTTCTTGGTGCACAGCAGAAAATGTGGCCAAAAGGATTGAATCCAGACATTCTGCATCCATACCTTGCCAAATCCCCACCCATCCTGCCATCCCCACTGCAAGGAAGAAGCTGGAGTTTCGCAGTTTCTCTAGGACACCTGATGCTAAGATATCCCAGAAGACTTCATGTGGCTCCTTGGATTCTCCAAGAAAAACTAAGCGGAAAGCAACCTTCTCAGAGACTACCTCACATTCTAAGAGACCCCAGCCAGATGGAATCAAGACATCATCTCCAGCTCTGAAAGCCCTAGAGAAAACTGGAGAGGTTGGACTCTTTTGTGCTGATGATAAGGAGTCACCTGAATGTCACATGATCCTAAGAACCCGAGTCTCAGCTGTGAAAACCACCTGGATTAGTGAGACAAATCTTACTCCTACCAGGGGGGGTCAGAGATCCTCGGCGGTGCCTTATGTGGACCTGAAACCAGAATACATCAAAAAGAGGGAGGCTAAAGAACCAGAAGCTCAGAATGAAGCTACCTCTATTTCCCATCGTGTCCGCAGAAAGAGTTCTCTCTTGACATTGAATCGGATTAGGCAGCAGCTTCGGTTTCTAGAAAATGATAAAAATGACCAAGAGGAGAAAGAATTCCTGCCATCAGCAGAGGATTCCGACTCCAGCAGTGAGGATGAAGAGGTTTGTGCTCCAGCCCGGGAGAGAAGAAATCCCTGCCGCACGTCCAGGAACCTGTGGCCTTTCTTGGTGCCATCTGTCCAGACACCCTCTAAGACACCAAAGAAAGCCCTCAAGCCTAGAACACCACATCGTGTCACTGCCAAGATCCGTAGCCGAAGCCTGGCTGCCCAGGAGCCGGCCAGTGTGCTGGAGGAGGCTCGGCTGAGGCTGCATGTTTCTGCTGTGCCCGAATCTCTTCCTTGTCGAGAGCAGGAATTCCAGGACATCTACAACTTTGTGGAAAGCAAACTGCTTGACCAAACTGGAGGGTGCATGTACATCTCTGGGGTCCCTGGGACAGGAAAGACTGCCACTGTCCACGAGGTGATACGCTGTCTGCAACAGGCAGCCCAAACTAGTGACGTTCCTCCCTTCCAGTACATTGAGGTTAATGGCATGAAGTTGACTGAGCCCCACCAAGTCTACGTGCAGATCTTGGAGAAGCTGACAGGCCAGAAGGCAACAGCTAACCATGCAGCAGCACTTCTGGCAAAACAATTCTGTACCCGACGGTCCCCACAGGAAACCACTGTCCTGCTTGTGGATGAGCTTGACCTTCTGTGGACTCACAAGCAAGATGTCATGTATAATCTGTTTGACTGGCCCACTCACAAGGAGGCTCGCCTGGTGGTCCTCACCATTGCCAACACCATGGATCTGCCCGAGAGGATCATGATGAGCCGGGTGTCGAGCCGATTGGGCCTTACCAGGATGTCCTTCCAGCCCTACACACACAGTCAACTGCAGCAGATCCTAGTGTCTCGACTCAAGCATTTAAAGGCCTTTGAGGATGATGCCATCCAGTTGGTGGCCAGGAAGGTAGCAGCCCTCTCGGGGGATGCACGGCGCTGCCTGGATATTTGCCGGCGAGCGACAGAGATCTGCGAGTTCTCCCACCAGAAGCAGGACTCGCCCGGCCTGGTCACCGTGGCCCACTTAATGGAAGCTGTGGATGAGATGTTCTCCTCGTCATACATCACTGCCATCAAGAATTCCTCCGTCCTGGAACAGGGCTTCCTGAGAGCCATCCTTGCAGAGTTCCATCGATCCGGACTGGAGGAAGCAACATTTCAACAGATATACAGTCAGCACGTGGCCCTGTGCCGAATGGAAGGGCTGCCCTACCCCACCATGTCAGAGACCATGGCTGTGTGCTCGCGCCTGGGCTCCTGCCGCCTTCTCCTTATGGAGCCCAGCAGGAACGACCTGCTCCTTCGGGTGCGGCTCAACGTCAGCCGGGATGACGTACTGTATGCATTGAAGGAAGAGTGA

Related Sequences

XP_004869303.1 Protein

Orc1 PREDICTED: origin recognition complex subunit 1 [Heterocephalus glaber]

Length: 872 aa      View alignments
>XP_004869303.1
MQWISWKPAAEKRTMASYNTRQKTRKTYSWVGRPLLDRKLSHQTYKEISVKIEGCSTQTHIQVGQFVLIEGEDDQNPYIAKLIELFEDDSKPCSRKCARVQWFIRFCEVAPCKQHFLGRKPDAQEIFWYDYPACDDNINIETVIGPVRVVALAPDEVIPMDLKNEKTFFVKLSWNGKKFRPLSPELFAEFDKLQGEGPKCQKPRTKNAESPSWCTAENVAKRIESRHSASIPCQIPTHPAIPTARKKLEFRSFSRTPDAKISQKTSCGSLDSPRKTKRKATFSETTSHSKRPQPDGIKTSSPALKALEKTGEVGLFCADDKESPECHMILRTRVSAVKTTWISETNLTPTRGGQRSSAVPYVDLKPEYIKKREAKEPEAQNEATSISHRVRRKSSLLTLNRIRQQLRFLENDKNDQEEKEFLPSAEDSDSSSEDEEVCAPARERRNPCRTSRNLWPFLVPSVQTPSKTPKKALKPRTPHRVTAKIRSRSLAAQEPASVLEEARLRLHVSAVPESLPCREQEFQDIYNFVESKLLDQTGGCMYISGVPGTGKTATVHEVIRCLQQAAQTSDVPPFQYIEVNGMKLTEPHQVYVQILEKLTGQKATANHAAALLAKQFCTRRSPQETTVLLVDELDLLWTHKQDVMYNLFDWPTHKEARLVVLTIANTMDLPERIMMSRVSSRLGLTRMSFQPYTHSQLQQILVSRLKHLKAFEDDAIQLVARKVAALSGDARRCLDICRRATEICEFSHQKQDSPGLVTVAHLMEAVDEMFSSSYITAIKNSSVLEQGFLRAILAEFHRSGLEEATFQQIYSQHVALCRMEGLPYPTMSETMAVCSRLGSCRLLLMEPSRNDLLLRVRLNVSRDDVLYALKEE