Sequence details NCBI ID: XM_004869155.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rnpc3
Gene Name RNA-binding region (RNP1, RRM) containing 3
Entrez Gene ID 101703023

Database interlinks

Part of NW_004624857.1 (Scaffold)

For more information consult the page for NW_004624857.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RNPC3 ENSG00000185946 (Human)

Gene Details

RNA-binding region (RNP1, RRM) containing 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000432886, Human)

Protein Percentage 10.44%
CDS Percentage 31.66%
Ka/Ks Ratio 0.8537 (Ka = 2.3282, Ks = 2.7272)

Rnpc3 ENSMUSG00000027981 (Mouse)

Gene Details

RNA-binding region (RNP1, RRM) containing 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000089792, Mouse)

Protein Percentage 10.46%
CDS Percentage 32.39%
Ka/Ks Ratio 0.44588 (Ka = 2.2426, Ks = 5.0296)

Rnpc3 ENSRNOG00000017310 (Rat)

Gene Details

RNA-binding region (RNP1, RRM) containing 3 (Rnpc3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023366, Rat)

Protein Percentage 10.84%
CDS Percentage 31.73%
Ka/Ks Ratio 0.25994 (Ka = 2.2007, Ks = 8.4662)

Genome Location

Sequence Coding sequence

Length: 1536 bp    Location: 6622173..6646678   Strand: +
Raw sequence   
>XM_004869155.1
ATGAAGTTCTTTCTATTGTTCTCAGCCCTTGGGCTCTGCTGGGCTCAGTATGCCCCGCATACTCAACAGGGACGCACATCTATTGTCCACCTGTTTGAGTGGCGCTGGGCCGACATTGCTGAGGAATGTGAACGATACTTAGGTCCAAAGGGATTTGGAGGTGTTCAGGTCTCTCCACCCAATGAAAATGTTGTAATTACCAACCCCTATAGACCCTGGTGGGAAAGATATCAACCAGTTAGCTATAAATTATGCTCAAGATCTGGAAATGAAGATGAATTCAGAAACATGGTGACTAGGTGTAACAATGTTGGTGTCCGAATTTATGTGGATGCTATAATCAATCACATGTGTGGTGTTGGCAATGCTGCAGGAACAAGCAGTACTTGTGGAAGTTACTACAATCCTCATAATAGGGATTTTCCAGCAGTTCCATACTCTGGTTGGGATTTTAATGATGGTAAATGTAAAACTGAAAGTGGAGGCATTGAAAACTATGTGGATCCTTTTCAGGTCAGAGATTGTCGTCTCTCTGGTCTTCTTGATCTTGCACTTGAGAAGGATTATGTGCGTTCCAAGATTGCTGAGTACCTGAACCATCTCATTGCCATTGGTGTAGCAGGGTTCAGAATTGATGCTTCTAAACATATGTGGCCTGGAGACATCAAGGCAGTTTTGGATAAATTGCATAATCTGAGTACAAATTGGTTCCCTGAAGGAAGTCGACCTTTCATTTACCAGGAGGTAATTGATCTTGGTGGTGAAGCAATTAAAAGTAGTGAATATGTTGGAAATGGCCGTGTGACAGAATTCAAGTACGGTGCAAAGCTGGGTACAGTTATTCGCAAATGGAATGGAGAGAAGATGTCTTATTTAAAGAACTGGGGAGAAGGATGGGGCTTCATGCCGTCTGACAGAGCACTTGTCTTTGTGGATAACCATGACAATCAGCGAGGTCATGGAGCTGGAGGAGCATCTATTCTTACATTCTGGGATGCTAGACTATATAAAATGGCTGTTGGATTTATGCTTGCTCATCCTTACGGAATAACACGAGTAATGTCAAGCTACTATTGGCAAAGACATTTTGAGAATGGAAAAGATGTTAATGATTGGACTGGGCCACCAAACAATAATGGAATGACTAAAGAAATAACTATTAACCCAGACACTACCTGTGGCAATGGCTGGGTCTGTGAACATCGCTGGCGTCAAATAAGGAACATGGTTGCTTTCCGAAACGTGGTTGATGGCCAGCCTTTCTCAAACTGGTGGGATAATGGAAGCAACCAAGTAGCTTTTGGAAGAGGAAACAGAGGATTCATTGTCTTTAACAATGATGACTGGTCACTGTCATCAACTTTGCAAACTGGCTTACCTGCTGGCACATATTGTGATGTCATTTCTGGAGATAAAGTTGATGGCAACTGCACAGGAATTAAAATCTATGTTTCTGGTGAAGGCATGGCTCATTTTTCTATTAGTAACTCTGCTGAAGACCCCTTTATTGCCATTCATTCTGAATCAAAATTATAA

Related Sequences

XP_004869212.1 Protein

Rnpc3 PREDICTED: pancreatic alpha-amylase-like [Heterocephalus glaber]

Length: 511 aa      
>XP_004869212.1
MKFFLLFSALGLCWAQYAPHTQQGRTSIVHLFEWRWADIAEECERYLGPKGFGGVQVSPPNENVVITNPYRPWWERYQPVSYKLCSRSGNEDEFRNMVTRCNNVGVRIYVDAIINHMCGVGNAAGTSSTCGSYYNPHNRDFPAVPYSGWDFNDGKCKTESGGIENYVDPFQVRDCRLSGLLDLALEKDYVRSKIAEYLNHLIAIGVAGFRIDASKHMWPGDIKAVLDKLHNLSTNWFPEGSRPFIYQEVIDLGGEAIKSSEYVGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGITRVMSSYYWQRHFENGKDVNDWTGPPNNNGMTKEITINPDTTCGNGWVCEHRWRQIRNMVAFRNVVDGQPFSNWWDNGSNQVAFGRGNRGFIVFNNDDWSLSSTLQTGLPAGTYCDVISGDKVDGNCTGIKIYVSGEGMAHFSISNSAEDPFIAIHSESKL