Details from NCBI annotation

Gene Symbol Vcam1
Gene Name vascular cell adhesion molecule 1, transcript variant X1
Entrez Gene ID 101725534

Database interlinks

Part of NW_004624857.1 (Scaffold)

For more information consult the page for NW_004624857.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VCAM1 ENSCPOG00000006727 (Guinea pig)

Gene Details

vascular cell adhesion molecule 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006062, Guinea pig)

Protein Percentage 85.07%
CDS Percentage 89.51%
Ka/Ks Ratio 0.33759 (Ka = 0.0786, Ks = 0.2327)

VCAM1 ENSG00000162692 (Human)

Gene Details

vascular cell adhesion molecule 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000294728, Human)

Protein Percentage 80.78%
CDS Percentage 84.66%
Ka/Ks Ratio 0.28303 (Ka = 0.1126, Ks = 0.398)

Vcam1 ENSMUSG00000027962 (Mouse)

Gene Details

vascular cell adhesion molecule 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029574, Mouse)

Protein Percentage 74.02%
CDS Percentage 79.52%
Ka/Ks Ratio 0.28104 (Ka = 0.1612, Ks = 0.5734)

Vcam1 ENSRNOG00000014333 (Rat)

Gene Details

vascular cell adhesion molecule 1 (Vcam1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019377, Rat)

Protein Percentage 74.56%
CDS Percentage 79.25%
Ka/Ks Ratio 0.25136 (Ka = 0.1561, Ks = 0.6209)

Genome Location

Sequence Coding sequence

Length: 2229 bp    Location: 3606579..3625991   Strand: +
>XM_004869135.1
ATGCCTGGGAAGATAGCCATGATCTTTGGAGTTTCAAATATACTTTGGATAGTGTTTGCGGCCTCTCAGGCTTTTAAAATTGAGACCTCCCCAGAATCCCGGATTCTTGCTCAGATAGGTGACTCCATCTCACTGACTTGCAGCACCACAGGCTGCGAGTCCCCATCTTTCTCTTGGAGAACGCAGATAGACAGTCCGCTGAATGCCAAGGTGAGGAATGAAGGCACCAAGTCCACGCTGACCATGGATCCCGTTAGTTTCGAGAATGAACACTCCTATCTGTGCACAGCAACTTGCGGATCCAGGAAGGAGGAAAAAGAAATACAGGTGGATGTCTACTCTTTTCCCAAGGATCCAGAGATTCATTTCAGTGGCCTTCTGGAGGTCGGAAAGCCCATCATAGTCAAGTGTCTGGTCCCTGATGTGTACCCATTTGACAGGCTGGAGATGGAGTTACTGAAGGGTGACTCCCATCTGAAGAATCAGGAATTTCTGGAAGATATGGACAAGAAGTCCTTGGAAACCAAGAGTCTTGAAGTAACCTTTACTCCTACCATTGAAGATATTGGAAAAGCACTCATTTGCCGAGCTAAATTGCACATTACTGAAACTGATTCTGAAGAATCAAATCCCAAAGAAAAGGAGACTAACAAAGAACTGCAAGTCTACATCTCACCCAAGAACACAGCTATCTCTGTGCAACCCTCCACGAGGCTGCAAGAGGGTGACTCTGTGACTCTGACGTGTTCCAGTGAGGGTCTACCAGCTCCTGAGAGTGTCTGGAGCAAGAAATTAGACAATGGGAATCTACAGCTTCTTTCAGGGAATGCAACTCTCACATTAATTGCCATGAAAATGGAAGATTCTGGAATTTATGTCTGTGAAGGAGTCAATCAGATTGGGAGAAACAGAAAAGAGGTGGAATTAATTGTTCAAGAGAAACCATTTACTGTCGACATCTCCCCTGGACACCAGGTTGCTGCCCAGGTTGGGGACTCAATTGTGTTGACATGTAGTGTCACAGATTGTGAGTCCCCATCTTTCTCTTGGAGAACCCAGAGAAACAGCTCTCTGAGTGGGATGGTGCGGATTGTGAGGACTGAGTCCACAGTGAACTTGAGCTCTGTGAGTTTAGAGAACGAAGATCAATACCTATGCACAGTGACATGTGGACACAGAAAAGTGGAAAAGGAAATCCAGGTGGAGCTCTACTCATTCCCTCAAGATCCAGAAATTGAGATGAGTGATCTACTAGTGAGTGGGAATCCTGTCACTGTAAGCTGCAAGGTTCCTTTTGTGTATCCTTTTGACCACTTGGAGATTGAAATACGTAAAGGAGAAACTCTTATGGTGAATAAATACTTTTCAGAGGAAATGGACATAAAATCCCTAAAGAACCACAGTTTGGAAATGACCTTCACTCCCACCACTGAAGATACTGGAAATGTGCTTGTTTGTCAAGCGAAGTTACATATTGGTGAAATGGAATCTGAACCCAAACAAAGGCAGAGTACACAGACACTTTATGTCAATGTTGCCCCCACAGATACCACTGTCTTGTTCAACCCCTCCTCTATCTTAGAGGAAGGCAGTTCTGTGAATATGACATGCAGTAGTAACGGCATTCCAGCTCCAAAAATCCTGTGGAGCAGACAGCTCAGTAATGGAGATCTACAGCTTCTTTCTGAGACTACCACACTCACCTTAATTTCCACAAAAATGGAAGATTCTGGCATTTATGTGTGTGAAGGGATTAACCAGGCTGGAATAAGCAGAAAAAAAGTTGAACTAACTATCCAAGTTGCTCCAAAAGACATACAACTTACAGCTTTTCCTTCTGAGAGTGTCAAGGAAGGAGACATGGTCATTATCTCTTGTACATGTGGAAATGTTCCAGAAACTTGGATAATTCTGAAGAAAAAAACAGAGATGGGAGACACAGTGCTAAAGTCTATAGATGGTGCATACACCATCCACAAGGTGCAGCTGGAGGATGCAGGAGTATATGAATGTGAATCTAAAAATAAAGTTGGCTCAGAATTAAGAAGCCTAACGCTGGATGTTAAAGGAAGAGAAAATAATAAGGACTATTTTTCCCCCGAACTTCTTGTTCTCTACTGTACATTCTCCTTAATAATACCTGCCTTCGGGATGATCATTTACTTTGCAAGAAAAGCCAACATGAAAGGATCATACAGTCTGGTAGAAGCACAGAAATCAAAAGTGTAG

Related Sequences

XP_004869192.1 Protein

Vcam1 PREDICTED: vascular cell adhesion protein 1 isoform X1 [Heterocephalus glaber]

Length: 742 aa      View alignments
>XP_004869192.1
MPGKIAMIFGVSNILWIVFAASQAFKIETSPESRILAQIGDSISLTCSTTGCESPSFSWRTQIDSPLNAKVRNEGTKSTLTMDPVSFENEHSYLCTATCGSRKEEKEIQVDVYSFPKDPEIHFSGLLEVGKPIIVKCLVPDVYPFDRLEMELLKGDSHLKNQEFLEDMDKKSLETKSLEVTFTPTIEDIGKALICRAKLHITETDSEESNPKEKETNKELQVYISPKNTAISVQPSTRLQEGDSVTLTCSSEGLPAPESVWSKKLDNGNLQLLSGNATLTLIAMKMEDSGIYVCEGVNQIGRNRKEVELIVQEKPFTVDISPGHQVAAQVGDSIVLTCSVTDCESPSFSWRTQRNSSLSGMVRIVRTESTVNLSSVSLENEDQYLCTVTCGHRKVEKEIQVELYSFPQDPEIEMSDLLVSGNPVTVSCKVPFVYPFDHLEIEIRKGETLMVNKYFSEEMDIKSLKNHSLEMTFTPTTEDTGNVLVCQAKLHIGEMESEPKQRQSTQTLYVNVAPTDTTVLFNPSSILEEGSSVNMTCSSNGIPAPKILWSRQLSNGDLQLLSETTTLTLISTKMEDSGIYVCEGINQAGISRKKVELTIQVAPKDIQLTAFPSESVKEGDMVIISCTCGNVPETWIILKKKTEMGDTVLKSIDGAYTIHKVQLEDAGVYECESKNKVGSELRSLTLDVKGRENNKDYFSPELLVLYCTFSLIIPAFGMIIYFARKANMKGSYSLVEAQKSKV