Details from NCBI annotation

Gene Symbol Rtca
Gene Name RNA 3'-terminal phosphate cyclase, transcript variant X4
Entrez Gene ID 101722773

Database interlinks

Part of NW_004624857.1 (Scaffold)

For more information consult the page for NW_004624857.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RTCA ENSG00000137996 (Human)

Gene Details

RNA 3'-terminal phosphate cyclase

External Links

Gene Match (Ensembl Protein ID: ENSP00000260563, Human)

Protein Percentage 93.85%
CDS Percentage 92.23%
Ka/Ks Ratio 0.10629 (Ka = 0.0304, Ks = 0.2857)

Rtca ENSMUSG00000000339 (Mouse)

Gene Details

RNA 3'-terminal phosphate cyclase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000000348, Mouse)

Protein Percentage 89.32%
CDS Percentage 86.3%
Ka/Ks Ratio 0.10586 (Ka = 0.0554, Ks = 0.5234)

Rtcd1 ENSRNOG00000014575 (Rat)

Gene Details

RNA terminal phosphate cyclase domain 1 (Rtcd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020149, Rat)

Protein Percentage 89.97%
CDS Percentage 86.62%
Ka/Ks Ratio 0.10134 (Ka = 0.0523, Ks = 0.5156)

Genome Location

Sequence Coding sequence

Length: 930 bp    Location: 3138551..3172715   Strand: +
>XM_004869129.1
ATGATTCGAGATTTGTGTGACGGGAGACTGGAGGGGGCAGAAATTGGCTCAACAGAAATAACCTTTATACCAGAGAAGATCAAAGGTGGAGTCCACACAGCAGATACCAAGACAGCAGGGAGTGTATGCCTCTTGATGCAGGCTTCAATGCCCTGTGTTCTCTTTGCGGCTGCTCCCTCGGAACTTTGTTTGAAGGGTGGAACTAATGCTGAGATGGCACCACAGATTGACTACACGGTGCTGGTCTTCAAGCCAATCATTGAAAAATTTGGTTTCAAATTTAATTGTGACATTAAAATGAGGGGCTATTACCCAAAAGGGGGTGGTGAAGTAATCGTTCAGATGTCACCAGTTAAACAGTTGAACCCAATAAATTTAACTGATCGTGGCTCTGTGACTAAGATATATGGAAGAGCTTTTGTTGCTGGTGTTTTGCCATTTAAAGTAGCAAAAGATATGGTGGCAGCAGCTGTACGATGCATCAGAAAGGAGATCAGGGACCTATATGTGAGCATTCAGCCTGTTCAGGAACCCAAGGACCAAGCATTTGGCAATGGAAATGGAATAATCATTATTGCTGAGACATCTACTGGCTGTTTGTTTGCTGGATCATCACTTGGTAAACGAGGTGTTAATGCAGACAAGGTTGGAATTGAAGCTGCTGAAATGCTATTAGCAAATCTTAGACATGGTGGTACTGTGGATGAGTATCTGCAAGACCAGCTGATTGTTTTCATGGCATTAGCCAATGGAGTTTCCAGAATAAAAACAGGACCAGTTACACTCCATACACAAACAGCTATACATTTTGCTGAGCAACTAGCAAAGGCTAAATTTACTGTGAAGAAATCAGAAGATGAAGAAGATGCCTCTAAAGACACTTACATTATTGAGTGCCAAGGAATTGGGATGACAAATCCAAATATATAG

Related Sequences

XP_004869186.1 Protein

Rtca PREDICTED: RNA 3'-terminal phosphate cyclase isoform X4 [Heterocephalus glaber]

Length: 309 aa     
>XP_004869186.1
MIRDLCDGRLEGAEIGSTEITFIPEKIKGGVHTADTKTAGSVCLLMQASMPCVLFAAAPSELCLKGGTNAEMAPQIDYTVLVFKPIIEKFGFKFNCDIKMRGYYPKGGGEVIVQMSPVKQLNPINLTDRGSVTKIYGRAFVAGVLPFKVAKDMVAAAVRCIRKEIRDLYVSIQPVQEPKDQAFGNGNGIIIIAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLANLRHGGTVDEYLQDQLIVFMALANGVSRIKTGPVTLHTQTAIHFAEQLAKAKFTVKKSEDEEDASKDTYIIECQGIGMTNPNI