Details from NCBI annotation

Gene Symbol Lrrc39
Gene Name leucine rich repeat containing 39
Entrez Gene ID 101721708

Database interlinks

Part of NW_004624857.1 (Scaffold)

For more information consult the page for NW_004624857.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC39 ENSCPOG00000000696 (Guinea pig)

Gene Details

leucine rich repeat containing 39

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000618, Guinea pig)

Protein Percentage 92.54%
CDS Percentage 93.63%
Ka/Ks Ratio 0.22647 (Ka = 0.0377, Ks = 0.1663)

LRRC39 ENSG00000122477 (Human)

Gene Details

leucine rich repeat containing 39

External Links

Gene Match (Ensembl Protein ID: ENSP00000359157, Human)

Protein Percentage 89.25%
CDS Percentage 90.25%
Ka/Ks Ratio 0.26377 (Ka = 0.0661, Ks = 0.2508)

Lrrc39 ENSMUSG00000027961 (Mouse)

Gene Details

leucine rich repeat containing 39

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029573, Mouse)

Protein Percentage 83.83%
CDS Percentage 84.83%
Ka/Ks Ratio 0.17589 (Ka = 0.0868, Ks = 0.4936)

Lrrc39 ENSRNOG00000015117 (Rat)

Gene Details

leucine rich repeat containing 39 (Lrrc39), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020297, Rat)

Protein Percentage 83.83%
CDS Percentage 83.93%
Ka/Ks Ratio 0.17171 (Ka = 0.0918, Ks = 0.5346)

Genome Location

Sequence Coding sequence

Length: 1008 bp    Location: 2979833..2948368   Strand: -
>XM_004869124.1
ATGACAGAAAATGTGGTTTGTACTGGGGCTGTCAATGCTGTAAAGGAAGTTTGGGAAAAAAGAATACAGAAAATCAATGAAGATCTGAAGCAAGAGAAGCAATTTCAAAAGAAGCTTGTGCGGATCTGGGAAGAACGAGTAAGCTTAACCAAGCTAAAAGAAAAAGTCACCAGGGAAGATGGAAGAGTCATCCTGAAGATAGAGAAAGAAGAATGGAAGACTCTTCCTTCTTCTTTACTGAAATTGAATCAGCTTCAGGAATGGCAACTACATAGAACTGGTTTGTTGAAAATTCCTGAATTCATTGGAAGATTCCAGAACCTCATTGTGTTAGATTTATCTCGAAACACTATTTCAGAGATACCTCCAGGAATTGGACTCCTCACTAGACTTCAGGAACTAATCCTTAGCTACAACAAAATCAAAACTGTCCCCAAGGAACTAAGTAATTGTGCCAGCTTGGAGAAACTAGAACTGGCTGTTAACAGAGATATATGTGATCTACCACAAGAGCTCAGCAATCTCTTAAAACTCACTCACCTTGATTTGAGTATGAACCACTTTACTACAATCCCTCTTGCTGTGTTGAACATGCCTGCCCTTGAGTGGCTGGACATGGGAAGCAACAGACTTGAACAACTTCCTGGTACTATAGAAAGAATGCAGAGTCTACATACATTATGGCTACAACGGAATGAAATAACATGCTTGCCAGAAACAATCAGCAATATGAAAAATCTGGGTACTCTTGTTCTCAGCAACAATAAACTGCAAGATATTCCAGTATGCATGGAGGGAATGGCAAATCTGAGGTTTGTCAACTTCAGAGACAACCCACTGAAATTCGAAGTAGCACTTCCTCTCAGTGAAAGCACAGATGAAGACGAGGAACAGGAATTATTTGGCCTTCAGTTTATGTACACATATATACAGGAGTCCCGCAAAAGAGCAGATGACCAAGTCAAGTGCTCAACTACTTTACCGACTGCTATAAATACTGATGAATAA

Related Sequences

XP_004869181.1 Protein

Lrrc39 PREDICTED: leucine-rich repeat-containing protein 39 [Heterocephalus glaber]

Length: 335 aa      View alignments
>XP_004869181.1
MTENVVCTGAVNAVKEVWEKRIQKINEDLKQEKQFQKKLVRIWEERVSLTKLKEKVTREDGRVILKIEKEEWKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRLQELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELSNLLKLTHLDLSMNHFTTIPLAVLNMPALEWLDMGSNRLEQLPGTIERMQSLHTLWLQRNEITCLPETISNMKNLGTLVLSNNKLQDIPVCMEGMANLRFVNFRDNPLKFEVALPLSESTDEDEEQELFGLQFMYTYIQESRKRADDQVKCSTTLPTAINTDE